version 1.0
Sorangium cellulosum 'So ce 56', complete genome - 1..13033779 9384 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1702 68.10 0 2319973..2320392 + 139 162449971 - sce1700 - hypothetical protein 1703 68.42 0 2320471..2321613 - 380 162449972 - sce1701 - hypothetical protein 1704 71.02 0 2321875..2322333 + 152 162449973 cspR sce1702 - rRNA methylase (SpoU class) 1705 75.58 +1 2322497..2323012 + 171 162449974 - sce1703 - hypothetical protein 1706 58.19 -2 2323124..2323630 - 168 162449975 - sce1704 - putative transcription factor 1707 76.50 +1 2324262..2325197 - 311 162449976 ppx1 sce1705 - hypothetical protein 1708 67.76 0 2325208..2326032 - 274 162449977 - sce1706 - outer membrane protein 1709 73.02 0 2326524..2326901 + 125 162449978 - sce1707 - histone H1 protein 1710 71.57 0 2327273..2328883 - 536 162449979 - sce1708 - hypothetical protein 1711 73.10 0 2328912..2329610 - 232 162449980 - sce1709 - putative secreted proline rich protein 1712 73.20 0 2329697..2330155 + 152 162449981 - sce1710 - hypothetical protein 1713 70.12 0 2330214..2330879 - 221 162449982 mcrA sce1711 - HNH endonuclease family protein 1714 74.58 0 2331197..2332093 + 298 162449983 - sce1712 - exonuclease 1715 72.78 0 2332101..2333606 + 501 162449984 - sce1713 - hypothetical protein 1716 67.87 0 2333612..2334109 + 165 162449985 coaD sce1714 - pantetheine-phosphate adenylyltransferase 1717 70.34 0 2334122..2335156 - 344 162449986 - sce1715 - integral membrane protease 1718 74.87 0 2335606..2336568 + 320 162449987 - sce1716 - protein kinase 1719 71.46 0 2336974..2338224 + 416 162449988 pcnB sce1717 - Poly(A) polymerase 1720 73.77 0 2338355..2340001 + 548 162449989 - sce1718 - hypothetical protein 1721 71.59 0 2339998..2340444 + 148 162449990 - sce1719 - ADP-ribose pyrophosphatase 1722 70.68 0 2341089..2341886 + 265 162449991 - sce1720 - TetR family transcriptional regulator 1723 68.16 0 2341898..2343901 - 667 162449992 - sce1721 - hypothetical protein 1724 73.98 0 2344041..2345120 + 359 162449993 - sce1722 - geranylgeranyl pyrophosphate synthase 1725 68.02 0 2345234..2345455 + 73 162449994 - sce1723 - hypothetical protein 1726 76.85 +1 2345518..2347461 + 647 162449995 - sce1724 - hypothetical protein 1727 66.81 -1 2347458..2348867 + 469 162449996 - sce1725 - putative adenylate cyclase 1728 72.76 0 2348908..2350614 - 568 162449997 - sce1726 - oxidoreductase 1729 66.91 0 2351109..2351513 + 134 162449998 - sce1727 - hypothetical protein 1730 65.86 -1 2352002..2352373 + 123 162449999 - sce1728 - hypothetical protein 1731 74.17 0 2352370..2352729 + 119 162450000 - sce1729 - hypothetical protein 1732 71.06 0 2352735..2355830 - 1031 162450001 - sce1730 - hypothetical protein 1733 70.05 0 2355986..2356636 - 216 162450002 - sce1731 - hypothetical protein 1734 67.19 0 2356820..2357203 - 127 162450003 - sce1732 - hypothetical protein 1735 70.90 0 2357563..2358294 - 243 162450004 - sce1733 - HTH-type transcriptional regulator acrR 1736 74.96 0 2358444..2359106 + 220 162450005 - sce1734 - putative DNA polymerase related protein 1737 67.69 0 2359165..2361111 + 648 162450006 kup sce1735 - potassium uptake protein 1738 79.53 +2 2361126..2362415 - 429 162450007 - sce1736 - citrate synthase 1739 63.64 -1 2362370..2362600 - 76 162450009 - sce1737 - hypothetical protein 1740 76.17 +1 2362585..2363805 + 406 162450008 cis1 sce1738 - hypothetical protein 1741 76.54 +1 2364072..2364881 + 269 162450010 - sce1739 - recA recombinase-like protein 1742 77.44 +1 2364895..2366760 + 621 162450011 - sce1740 - hypothetical protein 1743 72.83 0 2366757..2370083 + 1108 162450012 dnaE1 sce1741 - DNA polymerase III, alpha subunit 1744 74.55 0 2370197..2371846 - 549 162450013 - sce1742 - hybrid histidine kinase 1745 75.22 +1 2372029..2372589 - 186 162450014 - sce1743 - hypothetical protein 1746 72.21 0 2372586..2376191 - 1201 162450015 - sce1744 - hypothetical protein 1747 70.47 0 2376456..2376797 + 113 162450016 - sce1745 - hypothetical protein 1748 71.69 0 2376921..2378015 + 364 162450017 pheA1 sce1746 - hypothetical protein 1749 71.48 0 2378015..2379052 + 345 162450018 - sce1747 - hypothetical protein 1750 76.95 +1 2379054..2381777 - 907 162450019 hrpB sce1748 - ATP-dependent RNA helicase 1751 75.14 +1 2381867..2383471 + 534 162450020 gatA2 sce1749 - hypothetical protein 1752 76.45 +1 2383906..2385009 - 367 162450021 - sce1750 - putative glycosyltransferase 1753 64.44 -1 2385211..2385435 - 74 162450022 rpsU sce1751 - 30S ribosomal protein S21 1754 73.89 0 2385857..2386396 + 179 162450023 - sce1752 - FUR family transcriptional regulator 1755 66.67 -1 2386484..2386912 + 142 162450024 rubY sce1753 - hypothetical protein 1756 70.35 0 2387081..2388439 + 452 162450025 glpC sce1754 - hypothetical protein 1757 67.71 0 2388474..2389049 + 191 162450026 - sce1755 - hypothetical protein 1758 70.05 0 2389055..2389498 + 147 162450027 fcbC sce1756 - 4-hydroxybenzoyl-CoA thioesterase 1759 74.23 0 2389495..2390142 + 215 162450028 - sce1757 - hypothetical protein 1760 72.39 0 2390169..2390867 + 232 162450029 rpiA sce1758 - ribose-5-phosphate isomerase 1761 73.94 0 2390985..2392277 - 430 162450030 argH sce1759 - argininosuccinate lyase 1762 73.09 0 2392278..2393366 - 362 162450031 - sce1760 - hypothetical protein 1763 73.09 0 2393416..2394504 + 362 162450032 idi sce1761 - isopentenyl pyrophosphate isomerase 1764 65.48 -1 2394730..2395575 + 281 162450033 - sce1762 - GAF domain-containing protein 1765 61.64 -2 2395578..2395955 + 125 162450034 - sce1763 - response regulator 1766 66.56 -1 2396087..2397019 - 310 162450035 - sce1764 - FHA/GGDEF domain-containing protein 1767 71.73 0 2397202..2397951 - 249 162450036 - sce1765 - hypothetical protein 1768 75.38 +1 2398077..2401265 + 1062 162450037 glnE sce1766 - glutamate-ammonia-ligase adenylyltransferase 1769 69.00 0 2401299..2401856 + 185 162450038 - sce1767 - hypothetical protein 1770 68.10 0 2402240..2403706 + 488 162450039 - sce1768 - hypothetical protein 1771 73.17 0 2404307..2404675 + 122 162450040 - sce1769 - hypothetical protein 1772 73.43 0 2405265..2405663 + 132 162450041 - sce1770 - hypothetical protein 1773 77.15 +1 2405867..2406925 - 352 162450042 - sce1771 - keratin associated protein 5-4 1774 65.52 -1 2406976..2408193 + 405 162450043 - sce1772 - hypothetical protein 1775 63.40 -1 2408200..2409762 + 520 162450044 spoVR sce1773 - stage V sporulation protein R 1776 75.10 0 2410206..2410976 + 256 162450045 - sce1774 - hypothetical protein 1777 57.71 -2 2411987..2412544 + 185 162450046 - sce1775 - hypothetical protein 1778 61.50 -2 2412541..2413779 + 412 162450047 ubiE1 sce1776 - quinone methyltransferase 1779 63.99 -1 2413825..2416212 + 795 162450048 - sce1777 - phosphoserine phosphatase 1780 57.63 -2 2416237..2417154 + 305 162450049 - sce1778 - hypothetical protein 1781 61.99 -2 2417230..2418192 + 320 162450050 - sce1779 - phosphoserine phosphatase 1782 59.65 -2 2418114..2418683 + 189 162450051 - sce1780 - hypothetical protein 1783 61.56 -2 2418718..2419128 + 136 162450052 - sce1781 - hypothetical protein 1784 69.32 0 2419163..2420521 + 452 162450053 rsbR1 sce1782 - positive regulator of sigma-B 1785 66.26 -1 2420799..2421287 + 162 162450054 - sce1783 - MarR family transcriptional regulator 1786 67.41 0 2421312..2422250 + 312 162450055 - sce1784 - hypothetical protein 1787 73.13 0 2422205..2423071 - 288 162450058 - sce1785 - hypothetical protein 1788 72.77 0 2422247..2423032 + 261 162450056 crt sce1786 - putative enoyl-CoA hydratase/isomerase family protein 1789 71.02 0 2423070..2424632 + 520 162450057 - sce1787 - Acyl-CoA carboxylase subunit 1790 73.16 0 2424696..2426174 - 492 162450059 - sce1788 - hypothetical protein 1791 77.16 +1 2426297..2427049 + 250 162450060 thiE1 sce1789 - thiamine-phosphate diphosphorylase 1792 80.43 +2 2427046..2427648 + 200 162450061 - sce1790 - hypothetical protein 1793 76.10 +1 2427686..2428681 - 331 162450062 holB sce1791 - DNA polymerase III delta' subunit 1794 72.89 0 2428834..2429862 + 342 162450063 - sce1792 - hypothetical protein 1795 71.17 0 2429970..2431478 + 502 162450064 - sce1793 - hypothetical protein 1796 71.02 0 2431572..2433017 - 481 162450065 - sce1794 - protein kinase 1797 77.33 +1 2433187..2434077 + 296 162450066 - sce1795 - hypothetical protein 1798 73.03 0 2434136..2434654 - 172 162450067 - sce1796 - hypothetical protein 1799 70.09 0 2434948..2437020 + 690 162450068 - sce1797 - hypothetical protein 1800 72.32 0 2437012..2438763 - 583 162450069 - sce1798 - putative secreted protein 1801 72.43 0 2439168..2440208 - 346 162450070 obg sce1799 - GTP binding protein 71.02 MEAN 4.11 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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