version 1.0
Sorangium cellulosum 'So ce 56', complete genome - 1..13033779 9384 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1581 78.12 +1 2152001..2152987 - 328 162449850 - sce1579 - hypothetical protein 1582 76.78 +1 2153825..2155021 + 398 162449851 - sce1580 - hypothetical protein 1583 71.36 0 2154999..2155787 - 262 162449852 - sce1581 - hypothetical protein 1584 72.97 0 2156452..2159943 + 1163 162449853 nos sce1582 - nitric-oxide synthase, oxygenase subunit 1585 71.00 0 2160910..2161671 + 253 162449854 - sce1583 - hypothetical protein 1586 74.92 0 2162031..2162357 + 108 162449855 - sce1584 - hypothetical protein 1587 71.35 0 2162323..2163240 - 305 162449856 - sce1585 - hypothetical protein 1588 68.44 0 2163468..2164598 + 376 162449857 - sce1586 - hypothetical protein 1589 78.06 +1 2164683..2168420 + 1245 162449858 - sce1587 - protein kinase 1590 67.51 0 2168625..2169809 + 394 162449859 - sce1588 - cytochrome P450 CYP260A1 1591 64.63 -1 2170142..2170582 - 146 162449860 - sce1589 - hypothetical protein 1592 75.99 +1 2171302..2173833 - 843 162449861 - sce1590 - hypothetical protein 1593 73.80 0 2174201..2175055 + 284 162449862 - sce1591 - hypothetical protein 1594 66.12 -1 2175192..2176298 - 368 162449863 - sce1592 - hypothetical protein 1595 73.67 0 2176610..2177137 + 175 162449864 - sce1593 - CheY-like response regulator 1596 71.08 0 2177137..2179401 + 754 162449865 cheA3 sce1594 - chemotaxis sensor histidine kinase CheA 1597 73.37 0 2179394..2179930 + 178 162449866 cheW3 sce1595 - purine-binding chemotaxis protein CheW 1598 70.53 0 2179987..2180478 + 163 162449867 cheW4 sce1596 - hypothetical protein 1599 78.75 +1 2180475..2182592 + 705 162449868 - sce1597 - hypothetical protein 1600 70.23 0 2182589..2183515 + 308 162449869 cheR1 sce1598 - chemotaxis protein methyltransferase CheR 1601 71.10 0 2183609..2184691 + 360 162449870 cheB sce1599 - putative chemotaxis response regulator CheB type 1602 74.26 0 2184763..2187450 + 895 162449871 mltD1 sce1600 - murein transglycosylase 1603 68.03 0 2187502..2187867 - 121 162449872 - sce1601 - hypothetical protein 1604 75.82 +1 2188229..2190742 + 837 162449873 - sce1602 - protein kinase 1605 72.87 0 2190997..2192673 + 558 162449874 - sce1603 - protein kinase 1606 75.70 +1 2192679..2194703 + 674 162449875 - sce1604 - protein kinase 1607 70.66 0 2195745..2197448 - 567 162449876 - sce1605 - PE_PGRS family protein 1608 72.14 0 2197482..2198522 - 346 162449877 - sce1606 - hypothetical protein 1609 72.63 0 2198701..2200428 - 575 162449878 - sce1607 - PE_PGRS family protein 1610 71.99 0 2200440..2201510 - 356 162449879 - sce1608 - hypothetical protein 1611 74.02 0 2201781..2203385 - 534 162449880 - sce1609 - protein kinase 1612 70.95 0 2203728..2205383 - 551 162449881 - sce1610 - PE_PGRS family protein 1613 71.01 0 2205416..2206450 - 344 162449882 - sce1611 - hypothetical protein 1614 74.12 0 2206495..2208264 - 589 162449883 - sce1612 - hypothetical protein 1615 63.43 -1 2208254..2209273 - 339 162449884 - sce1613 - hypothetical protein 1616 76.84 +1 2209529..2210599 - 356 162449885 gcp sce1614 - putative glycoprotease 1617 76.49 +1 2210587..2211105 - 172 162449886 - sce1615 - hypothetical protein 1618 76.69 +1 2211174..2215604 - 1476 162449887 - sce1616 - TPR domain-containing protein 1619 76.09 +1 2216105..2220103 + 1332 162449888 - sce1617 - protein kinase 1620 66.92 0 2220296..2221096 + 266 162449889 - sce1618 - hypothetical protein 1621 71.48 0 2221266..2222492 + 408 162449890 - sce1619 - hypothetical protein 1622 77.96 +1 2222489..2226022 + 1177 162449891 - sce1620 - hypothetical protein 1623 66.54 -1 2226189..2227007 + 272 162449892 pssA1 sce1621 - hypothetical protein 1624 67.41 0 2227150..2227551 + 133 162449893 - sce1622 - hypothetical protein 1625 71.60 0 2227738..2228649 + 303 162449894 - sce1623 - hypothetical protein 1626 74.53 0 2228655..2230244 + 529 162449895 hemA sce1624 - hypothetical protein 1627 73.31 0 2230244..2231146 + 300 162449896 hemC sce1625 - hydroxymethylbilane synthase 1628 76.17 +1 2231261..2232859 + 532 162449897 - sce1626 - hypothetical protein 1629 73.50 0 2233294..2234595 + 433 162449898 - sce1627 - RND family efflux transporter 1630 68.22 0 2234639..2237866 + 1075 162449899 - sce1628 - RND family efflux transporter 1631 73.51 0 2237940..2239079 - 379 162449900 - sce1629 - serine protease 1632 71.91 0 2239189..2240922 + 577 162449901 - sce1630 - hypothetical protein 1633 75.19 +1 2241011..2241538 + 175 162449902 - sce1631 - hypothetical protein 1634 67.30 0 2241799..2242272 + 157 162449903 - sce1632 - hypothetical protein 1635 68.47 0 2242616..2243668 + 350 162449904 prfB1 sce1633 - peptide chain release factor 2 1636 71.14 0 2243665..2245386 + 573 162449905 lysS sce1634 - lysine--tRNA ligase 1637 69.63 0 2245383..2247545 + 720 162449906 - sce1635 - integral membrane protein 1638 70.07 0 2247553..2248287 + 244 162449907 - sce1636 - ABC transporter, ATP-binding protein 1639 73.34 0 2248276..2250357 - 693 162449908 - sce1637 - GMC oxidoreductase 1640 66.00 -1 2250550..2251593 - 347 162449909 astA sce1638 - arginine N-succinyltransferase 1641 70.40 0 2251781..2252557 - 258 162449910 aroE1 sce1639 - hypothetical protein 1642 72.60 0 2252752..2253408 + 218 162449911 lepB1 sce1640 - hypothetical protein 1643 72.81 0 2253418..2255241 - 607 162449912 - sce1641 - putative membrane bound zinc metallopeptidase 1644 72.65 0 2255468..2255968 + 166 162449913 - sce1642 - hypothetical protein 1645 73.25 0 2256034..2256276 + 80 162449914 - sce1643 - hypothetical protein 1646 74.89 0 2256279..2256947 + 222 162449915 - sce1644 - RNA polymerase sigma factor 1647 69.17 0 2256984..2257703 - 239 162449917 - sce1645 - hypothetical protein 1648 69.02 0 2257687..2258451 + 254 162449916 fabG3 sce1646 - 3-oxoacyl-[acyl-carrier-protein] reductase 1649 66.67 -1 2258791..2259003 + 70 162449918 - sce1647 - bacterioferritin-associated ferredoxin 1650 62.21 -2 2259202..2259672 + 156 162449919 - sce1648 - bacterioferritin 1651 68.58 0 2259884..2261239 + 451 162449920 - sce1649 - sigma-54 dependent DNA-binding response regulator 1652 66.67 -1 2261666..2262043 + 125 162449921 - sce1650 - two-component response regulator 1653 73.87 0 2262053..2263177 + 374 162449922 queA1 sce1651 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1654 71.90 0 2263174..2264358 + 394 162449923 tgt sce1652 - queuine tRNA-ribosyltransferase 1655 71.34 0 2264684..2266375 + 563 162449924 - sce1653 - hypothetical protein 1656 76.43 +1 2266447..2268597 + 716 162449925 - sce1654 - hypothetical protein 1657 68.64 0 2268696..2269100 + 134 162449926 - sce1655 - putative isobutyryl-CoA mutase, chain B 1658 63.83 -1 2269638..2270096 + 152 162449927 mraZ sce1656 - MraZ protein 1659 74.16 0 2270093..2271040 + 315 162449928 mraW sce1657 - methyltransferase 1660 75.99 +1 2271037..2271390 + 117 162449929 - sce1658 - hypothetical protein 1661 72.32 0 2271387..2273474 + 695 162449930 ftsI1 sce1659 - peptidoglycan glycosyltransferase 1662 75.51 +1 2273471..2275075 + 534 162449931 murE sce1660 - UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase, UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-L-lysine ligase 1663 66.05 -1 2275072..2276202 + 376 162449932 mraY sce1661 - phospho-N-acetylmuramoyl-pentapeptide transferase 1664 76.37 +1 2276207..2277577 + 456 162449933 murD sce1662 - UDP-N-acetylmuramoylalanine-D-glutamate ligase 1665 70.14 0 2277574..2278899 + 441 162449934 ftsW sce1663 - cell division protein 1666 78.08 +1 2278893..2280110 + 405 162449935 murG sce1664 - UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase 1667 71.70 0 2280110..2281519 + 469 162449936 murC1 sce1665 - UDP-N-acetylmuramate-alanine ligase 1668 74.93 0 2281516..2282532 + 338 162449937 ftsQ sce1666 - cell division protein 1669 70.14 0 2282662..2283984 + 440 162449938 ftsA sce1667 - cell division protein FtsA 1670 70.21 0 2284230..2285498 + 422 162449939 ftsZ sce1668 - cell division protein FtsZ 1671 70.90 0 2285650..2286735 + 361 162449940 - sce1669 - putative dnaJ protein 1672 74.98 0 2286797..2287963 - 388 162449941 - sce1670 - hypothetical protein 1673 73.27 0 2288004..2288882 - 292 162449942 - sce1671 - hypothetical protein 1674 67.40 0 2288879..2289151 - 90 162449943 - sce1672 - hypothetical protein 1675 73.91 0 2289287..2290528 - 413 162449944 - sce1673 - serine protease 1676 79.39 +2 2291108..2291830 + 240 162449945 - sce1674 - hypothetical protein 1677 78.59 +1 2291964..2292785 + 273 162449946 - sce1675 - putative peptidase 1678 71.97 0 2292782..2293630 + 282 162449947 - sce1676 - cyclic nucleotide binding protein 1679 70.69 0 2293847..2294740 + 297 162449948 - sce1677 - hypothetical protein 1680 68.73 0 2294897..2295283 + 128 162449949 - sce1678 - hypothetical protein 71.02 MEAN 4.11 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0