version 1.0
Sorangium cellulosum 'So ce 56', complete genome - 1..13033779 9384 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1485 72.37 0 2030515..2032005 + 496 162449754 - sce1483 - major facilitator superfamily permease 1486 71.13 0 2032002..2032292 + 96 162449755 - sce1484 - hypothetical protein 1487 71.99 0 2032494..2033789 + 431 162449756 - sce1485 - putative Beta-xylosidase 1488 73.15 0 2033841..2034503 + 220 162449757 - sce1486 - ECF family RNA polymerase sigma factor 1489 80.16 +2 2034500..2035396 + 298 162449758 - sce1487 - hypothetical protein 1490 64.74 -1 2035514..2035669 + 51 162449759 - sce1488 - hypothetical protein 1491 70.11 0 2036046..2036828 + 260 162449760 - sce1489 - lysophospholipase L1 and related esterases/ rhamnogalacturonan acetylesterase 1492 70.28 0 2037115..2037834 - 239 162449761 - sce1490 - hypothetical protein 1493 69.33 0 2038181..2038405 - 74 162449762 - sce1491 - hypothetical protein 1494 66.84 -1 2038476..2039066 - 196 162449763 - sce1492 - gliding motility protein 1495 73.24 0 2039425..2040672 - 415 162449764 - sce1493 - hypothetical protein 1496 74.06 0 2040881..2046835 - 1984 162449765 - sce1494 - protein kinase 1497 68.62 0 2047517..2048794 + 425 162449766 - sce1495 - putative beta-lactamase 1498 66.74 -1 2048864..2050165 - 433 162449767 nhaP sce1496 - Na+/H+ antiporter 1499 71.34 0 2050819..2052360 + 513 162449768 gatA1 sce1497 - putative amidase 1500 69.91 0 2052489..2054279 - 596 162449769 - sce1498 - putative endoglucanase A, secreted 1501 68.85 0 2054323..2055699 - 458 162449770 - sce1499 - putative secreted protein 1502 70.79 0 2055714..2057435 - 573 162449771 - sce1500 - signal peptide 1503 74.83 0 2057952..2059739 - 595 162449772 - sce1501 - putative adenylate/guanylate cyclase 1504 77.02 +1 2059764..2061569 - 601 162449773 mopB1 sce1502 - outer membrane protein 1505 77.79 +1 2061638..2064091 + 817 162449774 - sce1503 - hypothetical protein 1506 77.12 +1 2064088..2065599 + 503 162449775 - sce1504 - protein kinase 1507 60.37 -2 2065753..2066403 - 216 162449776 gst4 sce1505 - hypothetical protein 1508 69.46 0 2067166..2067810 + 214 162449777 - sce1506 - putative secreted protein 1509 67.87 0 2068063..2068725 + 220 162449778 - sce1507 - hypothetical protein 1510 69.33 0 2068722..2070263 + 513 162449779 - sce1508 - putative spermidine synthase 1511 66.34 -1 2070480..2070788 + 102 162449780 - sce1509 - hypothetical protein 1512 66.14 -1 2070737..2072068 + 443 162449781 - sce1510 - putative transposase 1513 66.12 -1 2072343..2073443 - 366 162449782 - sce1511 - putative esterase/lipase/thioesterase 1514 69.79 0 2074026..2074121 - 31 162449783 - sce1512 - hypothetical protein 1515 67.13 0 2074434..2075081 - 215 162449784 - sce1513 - hypothetical protein 1516 68.04 0 2075224..2075805 - 193 162449785 - sce1514 - hypothetical protein 1517 70.39 0 2076175..2077680 + 501 162449786 - sce1515 - putative endopeptidase 1518 64.63 -1 2077725..2079200 - 491 162449787 - sce1516 - hypothetical protein 1519 76.21 +1 2079249..2080202 - 317 162449788 - sce1517 - hypothetical protein 1520 70.65 0 2080199..2080876 - 225 162449789 - sce1518 - ECF family RNA polymerase sigma factor 1521 71.65 0 2080873..2081976 - 367 162449790 - sce1519 - hypothetical protein 1522 75.51 +1 2082313..2083149 + 278 162449791 - sce1520 - put. DNA binding protein 1523 69.02 0 2083330..2083923 + 197 162449792 - sce1521 - hypothetical protein 1524 64.62 -1 2084037..2084378 + 113 162449793 - sce1522 - hypothetical protein 1525 68.37 0 2084402..2086456 + 684 162449794 - sce1523 - glycogen debranching protein 1526 70.03 0 2086521..2087531 - 336 162449795 - sce1524 - oxidoreductase 1527 67.81 0 2087509..2088210 - 233 162449796 - sce1525 - hypothetical protein 1528 70.30 0 2088278..2089267 - 329 162449797 - sce1526 - putative D-isomer specific 2-hydroxyacid dehydrogenase family protein 1529 68.98 0 2089300..2091075 - 591 162449798 ilvD1 sce1527 - dihydroxy-acid dehydratase 1530 70.36 0 2091123..2092259 - 378 162449799 gcd sce1528 - glucose 1-dehydrogenase 1531 67.35 0 2092515..2092952 - 145 162449800 - sce1529 - hypothetical protein 1532 68.53 0 2092970..2093344 - 124 162449801 gst5 sce1530 - hypothetical protein 1533 67.50 0 2093472..2094677 + 401 162449802 - sce1531 - hypothetical protein 1534 70.65 0 2094697..2095323 + 208 162449803 - sce1532 - hypothetical protein 1535 68.73 0 2095341..2096117 + 258 162449804 - sce1533 - put. membrane protein 1536 64.24 -1 2096176..2096340 + 54 162449805 - sce1534 - ArsR family transcriptional regulator 1537 69.60 0 2096357..2097343 - 328 162449806 - sce1535 - alcohol dehydrogenase 1538 71.00 0 2097548..2098540 - 330 162449807 - sce1536 - AraC family transcriptional regulator 1539 72.32 0 2098776..2099765 - 329 162449808 - sce1537 - hypothetical protein 1540 73.25 0 2099772..2101139 - 455 162449809 - sce1538 - hypothetical protein 1541 68.90 0 2101314..2101760 + 148 162449810 - sce1539 - hypothetical protein 1542 64.44 -1 2102001..2102450 + 149 162449811 - sce1540 - hypothetical protein 1543 69.58 0 2102683..2103402 + 239 162449812 - sce1541 - hypothetical protein 1544 71.93 0 2104173..2105558 + 461 162449813 - sce1542 - putative protease inhibitor 1545 73.87 0 2105958..2106068 - 36 162449815 - sce1543 - hypothetical protein 1546 72.43 0 2106046..2106774 + 242 162449814 - sce1544 - hypothetical protein 1547 77.37 +1 2106777..2108177 + 466 162449816 - sce1545 - hypothetical protein 1548 61.39 -2 2108741..2109157 - 138 162449817 - sce1546 - hypothetical protein 1549 73.30 0 2109506..2111134 - 542 162449818 - sce1547 - N-acyl-D-amino-acid deacylase 1550 73.26 0 2111537..2112613 + 358 162449819 - sce1548 - glycosyltransferase 1551 69.48 0 2112716..2113354 + 212 162449820 - sce1549 - putative sugar aldolase 1552 69.80 0 2113351..2113893 + 180 162449821 - sce1550 - dioxygenase 1553 73.96 0 2113896..2114594 + 232 162449822 masA sce1551 - enolase-phosphatase 1554 74.89 0 2114658..2118560 + 1300 162449823 - sce1552 - protein kinase 1555 64.62 -1 2118847..2119431 + 194 162449824 - sce1553 - O-methyltransferase family protein 1556 76.64 +1 2119625..2121298 - 557 162449825 - sce1554 - prolipoprotein diacylglyceryl transferase 1557 75.32 +1 2121295..2122692 - 465 162449826 - sce1555 - hypothetical protein 1558 66.53 -1 2123303..2124754 + 483 162449827 - sce1556 - hypothetical protein 1559 71.78 0 2124875..2125735 - 286 162449828 - sce1557 - hypothetical protein 1560 73.27 0 2125909..2126847 + 312 162449829 - sce1558 - LysR family transcriptional regulator 1561 67.49 0 2126959..2128896 + 645 162449830 - sce1559 - putative secreted protein 1562 63.38 -1 2129468..2130562 + 364 162449831 - sce1560 - hypothetical protein 1563 72.87 0 2130864..2131604 + 246 162449832 - sce1561 - hypothetical protein 1564 72.40 0 2131877..2133970 + 697 162449833 - sce1562 - glycosyl hydrolase 1565 68.39 0 2134017..2135354 + 445 162449834 - sce1563 - Alpha-1-antitrypsin-like protein CM55-MS precursor. 1566 64.07 -1 2135521..2135751 + 76 162449835 - sce1564 - hypothetical protein 1567 72.30 0 2135790..2136695 - 301 162449836 - sce1565 - hypothetical protein 1568 70.69 0 2136781..2138496 - 571 162449837 - sce1566 - hypothetical protein 1569 64.46 -1 2138640..2139227 - 195 162449838 - sce1567 - hypothetical protein 1570 68.61 0 2139269..2140711 - 480 162449839 - sce1568 - hypothetical protein 1571 72.30 0 2140905..2142341 - 478 162449840 pdhC sce1569 - dihydrolipoyllysine-residue acetyltransferase 1572 68.21 0 2142345..2143319 - 324 162449841 pdhB1 sce1570 - pyruvate dehydrogenase (acetyl-transferring) 1573 70.78 0 2143473..2144663 - 396 162449842 pdhA sce1571 - pyruvate dehydrogenase (acetyl-transferring) 1574 72.46 0 2144867..2145436 - 189 162449843 - sce1572 - hypothetical protein 1575 74.53 0 2145515..2146633 - 372 162449844 lipA sce1573 - lipoyl synthase 1576 76.96 +1 2146683..2147828 - 381 162449845 - sce1574 - translation initiation factor IF-2B alpha subunit 1577 75.38 +1 2147829..2148161 - 110 162449846 - sce1575 - hypothetical protein 1578 69.52 0 2148172..2149011 - 279 162449847 fabG2 sce1576 - 3-oxoacyl-[acyl-carrier-protein] reductase 1579 71.31 0 2149849..2150946 + 365 162449848 - sce1577 - putative beta-galactosidase 1580 68.95 0 2151119..2151949 + 276 162449849 - sce1578 - hypothetical protein 1581 78.12 +1 2152001..2152987 - 328 162449850 - sce1579 - hypothetical protein 1582 76.78 +1 2153825..2155021 + 398 162449851 - sce1580 - hypothetical protein 1583 71.36 0 2154999..2155787 - 262 162449852 - sce1581 - hypothetical protein 1584 72.97 0 2156452..2159943 + 1163 162449853 nos sce1582 - nitric-oxide synthase, oxygenase subunit 71.02 MEAN 4.11 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.