version 1.0
Sorangium cellulosum 'So ce 56', complete genome - 1..13033779 9384 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1361 76.49 +1 1874341..1875582 + 413 162449630 - sce1359 - hypothetical protein 1362 74.63 0 1875783..1876787 + 334 162449631 - sce1360 - hypothetical protein 1363 74.12 0 1876853..1878073 + 406 162449632 - sce1361 - hypothetical protein 1364 60.92 -2 1880528..1881241 + 237 162449633 - sce1362 - putative secreted protein 1365 67.51 0 1881620..1882690 + 356 162449634 - sce1363 - hypothetical protein 1366 75.74 +1 1882811..1884022 + 403 162449635 dinP sce1364 - DNA polymerase IV 1367 70.73 0 1884052..1885305 + 417 162449636 - sce1365 - hypothetical protein 1368 72.65 0 1885351..1886553 + 400 162449637 - sce1366 - major facilitator superfamily permease 1369 67.52 0 1886564..1887034 + 156 162449638 - sce1367 - hypothetical protein 1370 70.99 0 1887387..1888589 + 400 162449639 - sce1368 - PE-PGRS family protein 1371 73.18 0 1889148..1890437 + 429 162449640 - sce1369 - PE-PGRS family protein 1372 65.75 -1 1890682..1891227 + 181 162449641 - sce1370 - dihydrofolate reductase family protein 1373 73.99 0 1891503..1892636 + 377 162449642 - sce1371 - PE-PGRS family protein 1374 74.88 0 1892914..1893777 + 287 162449643 - sce1372 - hypothetical protein 1375 76.73 +1 1893755..1894201 + 148 162449644 - sce1373 - hypothetical protein 1376 70.02 0 1894231..1895154 - 307 162449645 yedI sce1374 - hypothetical protein 1377 70.50 0 1895345..1896256 - 303 162449646 - sce1375 - GTPase 1378 75.11 0 1896287..1896997 - 236 162449647 dsbA sce1376 - DSBA oxidoreductase 1379 71.39 0 1897616..1898842 + 408 162449648 - sce1377 - hypothetical protein 1380 70.69 0 1899044..1899763 - 239 162449649 - sce1378 - acetyltransferase 1381 75.68 +1 1899828..1901525 - 565 162449650 - sce1379 - hypothetical protein 1382 74.42 0 1901663..1903312 - 549 162449651 - sce1380 - protein kinase 1383 75.71 +1 1903586..1904359 - 257 162449652 - sce1381 - putative nuclease 1384 72.41 0 1904475..1904909 + 144 162449653 rimI1 sce1382 - hypothetical protein 1385 68.58 0 1905179..1907011 + 610 162449654 - sce1383 - two-component sensor histidine kinase 1386 71.05 0 1907195..1908313 + 372 162449655 - sce1384 - putative secreted protein 1387 76.22 +1 1908356..1908931 - 191 162449656 - sce1385 - TetR family transcriptional regulator 1388 72.79 0 1908942..1909529 - 195 162449657 nodL sce1386 - galactoside O-acetyltransferase 1389 70.04 0 1910553..1912121 - 522 162449658 abgT sce1387 - putative integral membrane efflux protein 1390 71.14 0 1912271..1913566 - 431 162449659 - sce1388 - hypothetical protein 1391 69.25 0 1913572..1914537 - 321 162449660 - sce1389 - putative regulatory protein 1392 75.38 +1 1914534..1916633 - 699 162449661 - sce1390 - hypothetical protein 1393 73.81 0 1916630..1917427 - 265 162449662 - sce1391 - hypothetical protein 1394 72.07 0 1917424..1918404 - 326 162449663 - sce1392 - hypothetical protein 1395 73.52 0 1918401..1919261 - 286 162449664 - sce1393 - hypothetical protein 1396 67.72 0 1919278..1919847 - 189 162449665 - sce1394 - hypothetical protein 1397 66.43 -1 1920226..1921071 - 281 162449666 - sce1395 - hypothetical protein 1398 72.19 0 1921628..1923853 + 741 162449667 - sce1396 - CheA-like histidine kinase 1399 68.37 0 1923858..1924268 + 136 162449668 - sce1397 - response regulator 1400 68.75 0 1924265..1924840 + 191 162449669 - sce1398 - hypothetical protein 1401 71.36 0 1924841..1927270 + 809 162449670 - sce1399 - hypothetical protein 1402 77.05 +1 1927267..1927632 + 121 162449671 - sce1400 - hypothetical protein 1403 71.20 0 1928148..1929404 + 418 162449672 - sce1401 - anti-anti-sigma factor protein 1404 64.59 -1 1929528..1930634 + 368 162449673 - sce1402 - sugar-binding protein 1405 69.31 0 1930862..1932070 + 402 162449674 - sce1403 - anti-anti-sigma factor protein 1406 67.30 0 1932217..1932534 + 105 162449675 - sce1404 - ArsR family transcriptional regulator 1407 67.92 0 1932531..1932929 + 132 162449676 - sce1405 - hypothetical protein 1408 68.16 0 1933069..1934409 - 446 162449677 - sce1406 - hypothetical protein 1409 71.06 0 1934411..1935457 - 348 162449678 - sce1407 - hypothetical protein 1410 72.01 0 1935489..1936949 - 486 162449679 - sce1408 - protein kinase 1411 66.67 -1 1936983..1937108 - 41 162449680 - sce1409 - hypothetical protein 1412 73.11 0 1937163..1938062 - 299 162449681 - sce1410 - putative araC-like transcription regulator 1413 69.89 0 1938136..1938879 + 247 162449682 - sce1411 - putative dehydrogenase 1414 74.46 0 1938926..1939759 - 277 162449683 - sce1412 - hypothetical protein 1415 76.95 +1 1940023..1940829 - 268 162449684 otsB sce1413 - trehalose-phosphatase 1416 67.28 0 1940964..1941449 - 161 162449685 - sce1414 - hypothetical protein 1417 71.22 0 1941833..1943017 + 394 162449686 - sce1415 - major facilitator superfamily permease 1418 69.69 0 1943040..1944098 + 352 162449687 - sce1416 - ABC transport system substrate-binding protein 1419 72.51 0 1944194..1944775 - 193 162449689 - sce1417 - two-component system, response regulator 1420 72.32 0 1944743..1946158 + 471 162449688 - sce1418 - sensor histidine kinase 1421 68.77 0 1946298..1948337 + 679 162449690 - sce1419 - hypothetical protein 1422 67.32 0 1948443..1948898 - 151 162449691 - sce1420 - hypothetical protein 1423 75.54 +1 1949479..1950786 - 435 162449692 - sce1421 - MFP family efflux transporter 1424 69.11 0 1950783..1954016 - 1077 162449693 - sce1422 - multidrug efflux membrane protein 1425 74.29 0 1954077..1955060 + 327 162449694 - sce1423 - LysR family transcriptional regulator 1426 75.12 0 1955086..1957251 - 721 162449695 purR sce1424 - HTH-type transcriptional repressor purR 1427 73.23 0 1957564..1958934 - 456 162449696 - sce1425 - hypothetical protein 1428 75.19 +1 1958931..1960139 - 402 162449697 - sce1426 - hypothetical protein 1429 77.50 +1 1960314..1960904 - 196 162449698 - sce1427 - hypothetical protein 1430 67.21 0 1961055..1962533 + 492 162449699 - sce1428 - hypothetical protein 1431 73.86 0 1962592..1964286 + 564 162449700 - sce1429 - hypothetical protein 1432 66.38 -1 1964479..1965876 + 465 162449701 - sce1430 - hypothetical protein 1433 69.81 0 1965873..1966667 + 264 162449702 - sce1431 - hypothetical protein 1434 78.32 +1 1966671..1971692 - 1673 162449703 - sce1432 - protein kinase 1435 77.07 +1 1971791..1972492 + 233 162449704 - sce1433 - hypothetical protein 1436 69.38 0 1972588..1973139 + 183 162449705 - sce1434 - hypothetical protein 1437 70.64 0 1973425..1975539 + 704 162449706 - sce1435 - LacI family transcription regulator 1438 71.64 0 1975569..1976894 - 441 162449707 - sce1436 - hypothetical protein 1439 68.63 0 1977202..1978629 - 475 162449708 nrfA sce1437 - nitrite reductase (cytochrome; ammonia-forming) 1440 69.26 0 1978660..1979199 - 179 162449709 - sce1438 - small subunit of cytochrome c nitrite reductase 1441 69.64 0 1979642..1980886 + 414 162449710 - sce1439 - major facilitator superfamily permease 1442 67.10 0 1981415..1983730 + 771 162449711 - sce1440 - putative terpene cyclase 1443 66.95 0 1983752..1985158 + 468 162449712 - sce1441 - putative nucleotide-binding protein 1444 66.81 -1 1985255..1986655 + 466 162449713 - sce1442 - putative nucleotide-binding protein 1445 68.21 0 1986670..1988355 + 561 162449714 - sce1443 - membrane channel protein 1446 71.78 0 1988511..1991072 + 853 162449715 pepN1 sce1444 - aminopeptidase 1447 73.88 0 1991393..1992625 + 410 162449716 - sce1445 - hypothetical protein 1448 68.56 0 1992629..1993156 - 175 162449717 - sce1446 - hypothetical protein 1449 68.54 0 1993677..1994423 + 248 162449718 - sce1447 - putative secreted protein 1450 65.04 -1 1994434..1995234 + 266 162449719 - sce1448 - putative secreted protein 1451 72.06 0 1995209..1995709 + 166 162449720 - sce1449 - putative secreted protein 1452 71.56 0 1995729..1996832 - 367 162449721 - sce1450 - hypothetical protein 1453 72.78 0 1996960..1997613 - 217 162449722 - sce1451 - hypothetical protein 1454 65.03 -1 1997610..1997975 - 121 162449723 - sce1452 - hypothetical protein 1455 73.55 0 1998132..1999307 - 391 162449724 - sce1453 - concanavalin A-like lectin/glucanase-domain-containing protein 1456 72.45 0 1999433..2000314 - 293 162449725 - sce1454 - putative galactose mutarotase 1457 78.41 +1 2000331..2000645 - 104 162449726 - sce1455 - hypothetical protein 1458 68.43 0 2001141..2001821 + 226 162449727 - sce1456 - hypothetical protein 1459 68.98 0 2001873..2002391 - 172 162449728 - sce1457 - hypothetical protein 1460 75.19 +1 2002517..2003443 + 308 162449729 - sce1458 - 2-hydroxy-6-oxohepta-2,4-dienoate hydrolase 71.02 MEAN 4.11 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.