version 1.0
Sorangium cellulosum 'So ce 56', complete genome - 1..13033779 9384 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1258 75.86 +1 1742853..1743983 + 376 162449527 - sce1257 - protein kinase 1259 72.46 0 1743976..1744182 - 68 162449529 - sce1258 - hypothetical protein 1260 75.27 +1 1744181..1745296 + 371 162449528 - sce1259 - hypothetical protein 1261 69.75 0 1746009..1748150 + 713 162449530 - sce1260 - two-component hybrid sensor and regulator 1262 74.89 0 1748858..1749307 - 149 162449532 - sce1261 - hypothetical protein 1263 78.90 +1 1748898..1749224 + 108 162449531 - sce1262 - erythrocyte membrane protein 1 (PfEMP1) 1264 73.58 0 1749944..1752547 - 867 162449534 - sce1263 - hypothetical protein 1265 74.01 0 1752531..1752707 + 58 162449533 - sce1264 - hypothetical protein 1266 74.55 0 1753361..1754845 + 494 162449535 - sce1265 - hypothetical protein 1267 74.69 0 1754928..1755413 - 161 162449536 - missed_out - hypothetical protein 1268 71.83 0 1755513..1756829 + 438 162449537 - sce1266 - serine (or cysteine) proteinase inhibitor, clade B (ovalbumin), member 1269 66.52 -1 1756917..1757579 - 220 162449538 - sce1267 - hypothetical protein 1270 77.02 +1 1757918..1759375 - 485 162449539 - sce1268 - GntR family transcriptional regulator 1271 74.24 0 1759446..1760501 + 351 162449540 wecD sce1269 - hypothetical protein 1272 63.62 -1 1760556..1761344 - 262 162449541 - sce1270 - hypothetical protein 1273 66.45 -1 1761341..1762267 - 308 162449542 - sce1271 - hypothetical protein 1274 71.04 0 1762702..1764324 + 540 162449543 - sce1272 - putative secreted protein 1275 70.03 0 1764341..1766452 - 703 162449544 fusA3 sce1273 - elongation factor (EF 1276 73.56 0 1766657..1767004 + 115 162449545 - sce1274 - putative transcriptional regulator, membrane protein 1277 76.33 +1 1767296..1769323 + 675 162449546 - sce1275 - protein kinase 1278 74.33 0 1769544..1770626 + 360 162449547 - sce1276 - hypothetical protein 1279 71.41 0 1770701..1771501 + 266 162449548 - sce1277 - hypothetical protein 1280 68.52 0 1771788..1771949 - 53 162449549 - sce1278 - hypothetical protein 1281 67.38 0 1772132..1773394 + 420 162449550 - sce1279 - hypothetical protein 1282 64.92 -1 1773401..1775863 + 820 162449551 - sce1280 - hypothetical protein 1283 74.22 0 1775911..1776360 - 149 162449552 - sce1281 - hypothetical protein 1284 51.25 -2 1776686..1777924 - 412 162449553 - sce1282 - hypothetical protein 1285 70.22 0 1779394..1780293 + 299 162449554 - sce1283 - integrase-like protein 1286 69.42 0 1780523..1781320 + 265 162449555 - sce1284 - integrase-like protein 1287 74.18 0 1781418..1782389 + 323 162449556 - sce1285 - hypothetical protein 1288 72.25 0 1782404..1782976 + 190 162449557 - sce1286 - RNA polymerase ECF-type sigma factor 1289 65.17 -1 1783104..1783436 + 110 162449558 - sce1287 - hypothetical protein 1290 71.88 0 1784342..1785205 - 287 162449559 - sce1288 - hypothetical protein 1291 64.40 -1 1785334..1785906 - 190 162449560 - sce1289 - hypothetical protein 1292 69.53 0 1785999..1786871 - 290 162449561 - sce1290 - hypothetical protein 1293 72.68 0 1786896..1788374 - 492 162449562 - sce1291 - hypothetical protein 1294 72.46 0 1788368..1789471 - 367 162449563 - sce1292 - putative secreted protein 1295 67.04 0 1789831..1790364 + 177 162449564 - sce1293 - hypothetical protein 1296 59.82 -2 1790361..1790915 + 184 162449565 - sce1294 - hypothetical protein 1297 59.14 -2 1790912..1791190 + 92 162449566 - sce1295 - hypothetical protein 1298 72.57 0 1791511..1792509 - 332 162449567 - sce1296 - two-component sensor histidine kinase 1299 69.19 0 1792676..1793506 - 276 162449568 - sce1297 - hypothetical protein 1300 68.33 0 1793421..1794503 - 360 162449569 - sce1298 - hypothetical protein 1301 71.01 0 1794583..1795479 - 298 162449570 - sce1299 - hypothetical protein 1302 72.04 0 1795773..1796852 + 359 162449571 - sce1300 - glycosyltransferase 1303 74.26 0 1796849..1798060 + 403 162449572 - sce1301 - glycosyltransferase 1304 68.52 0 1798188..1799321 - 377 162449573 - sce1302 - hypothetical protein 1305 68.22 0 1800273..1802402 + 709 162449574 - sce1303 - glycogen operon protein 1306 73.48 0 1802413..1803732 - 439 162449575 - sce1304 - GNAT family acetyltransferase 1307 70.16 0 1803738..1804625 - 295 162449576 - sce1305 - protein kinase 1308 77.16 +1 1804722..1806512 - 596 162449577 - sce1306 - assimilatory nitrite reductase small subunit 1309 70.01 0 1806649..1807815 - 388 162449578 - sce1307 - hypothetical protein 1310 71.57 0 1808009..1809967 + 652 162449579 - sce1308 - Terpenoid cylases/protein prenyltransferase-domain-containing protein 1311 61.79 -2 1810000..1810389 + 129 162449580 - sce1309 - hypothetical protein 1312 70.49 0 1810455..1811291 - 278 162449581 - sce1310 - putative secreted protein 1313 72.36 0 1811405..1812775 - 456 162449582 - sce1311 - monooxygenase 1314 71.15 0 1813137..1814162 + 341 162449583 - sce1312 - hypothetical protein 1315 68.65 0 1814268..1814771 + 167 162449584 - sce1313 - putative carbonate hydratase 1316 72.56 0 1815224..1815766 + 180 162449585 - sce1314 - hypothetical protein 1317 74.90 0 1815763..1816722 + 319 162449586 - sce1315 - phosphotransferase 1318 72.89 0 1817089..1818117 + 342 162449587 - sce1316 - hypothetical protein 1319 66.67 -1 1818247..1819149 + 300 162449588 - sce1317 - putative positive regulator of sigma-B 1320 75.10 0 1819576..1819824 + 82 162449589 - sce1318 - putative secreted protein 1321 67.78 0 1819957..1821486 + 509 162449590 - sce1319 - hypothetical protein 1322 68.82 0 1821566..1823143 + 525 162449591 - sce1320 - putative secreted protein 1323 65.37 -1 1823304..1824386 + 360 162449592 - sce1321 - ABC transporter substrate-binding protein 1324 70.96 0 1824451..1825311 + 286 162449593 - sce1322 - ABC transporter permease protein 1325 70.63 0 1825359..1826141 + 260 162449594 - sce1323 - ABC transporter permease protein 1326 69.18 0 1826211..1826966 + 251 162449595 - sce1324 - ABC transporter ATP-binding protein 1327 71.62 0 1827113..1828282 + 389 162449596 - sce1325 - sigma-54 dependent transcriptional regulator 1328 73.43 0 1828370..1829374 - 334 162449597 - sce1326 - hypothetical protein 1329 71.24 0 1829648..1830106 - 152 162449598 - sce1327 - thioredoxin 1330 73.20 0 1830226..1830684 - 152 162449599 - sce1328 - hypothetical protein 1331 77.86 +1 1830768..1831571 - 267 162449600 - sce1329 - putative secreted protein 1332 75.00 0 1831568..1833211 - 547 162449601 - sce1330 - putative secreted zinc protease 1333 71.15 0 1833216..1834976 - 586 162449602 - sce1331 - putative zinc protease 1334 72.15 0 1835078..1837612 - 844 162449603 - sce1332 - lysyl oxidase-like 1335 73.41 0 1837717..1838502 + 261 162449604 fabG1 sce1333 - 3-oxoacyl-[acyl-carrier-protein] reductase 1336 70.04 0 1838615..1840954 - 779 162449605 - sce1334 - hypothetical protein 1337 68.06 0 1841007..1842584 - 525 162449606 - sce1335 - hypothetical protein 1338 70.49 0 1842655..1844277 - 540 162449607 - sce1336 - hypothetical protein 1339 71.91 0 1844443..1845357 + 304 162449608 - sce1337 - hypothetical protein 1340 76.76 +1 1845361..1846380 - 339 162449609 - sce1338 - hypothetical protein 1341 80.31 +2 1846390..1847298 - 302 162449610 - sce1339 - hypothetical protein 1342 71.77 0 1847291..1847917 - 208 162449611 - sce1340 - RNA polymerase ECF-type sigma factor 1343 72.29 0 1847914..1848144 - 76 162449612 - sce1341 - hypothetical protein 1344 68.40 0 1849048..1849566 + 172 162449613 - sce1342 - hypothetical protein 1345 66.67 -1 1850373..1851461 + 362 162449614 - sce1343 - hypothetical protein 1346 69.27 0 1851452..1852489 + 345 162449615 - sce1344 - hypothetical protein 1347 67.75 0 1852657..1853118 + 153 162449616 - sce1345 - response regulator 1348 69.23 0 1853124..1855973 + 949 162449617 - sce1346 - hybrid histidine kinase 1349 68.06 0 1856145..1858223 + 692 162449618 - sce1347 - putative outer membrane protein 1350 66.30 -1 1858485..1859864 - 459 162449619 - sce1348 - ABC-type branched-chain amino acid transport system, periplasmic component 1351 78.37 +1 1860227..1861927 + 566 162449620 - sce1349 - hypothetical protein 1352 74.77 0 1862179..1863375 - 398 162449621 - sce1350 - putative secreted protein 1353 61.29 -2 1864134..1864226 + 30 162449622 kdpF sce1351 - putative membrane protein of the Kdp complex 1354 69.82 0 1864223..1865965 + 580 162449623 kdpA sce1352 - potassium-transporting ATPase A chain 1355 71.87 0 1865962..1868154 + 730 162449624 kdpB sce1353 - potassium-transporting ATPase B chain 1356 76.44 +1 1868175..1868747 + 190 162449625 kdpC sce1354 - potassium-transporting ATPase C chain 1357 73.14 0 1868760..1871492 + 910 162449626 kdpD sce1355 - sensor for high-affinity potassium transport system 71.02 MEAN 4.11 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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