version 1.0
Sorangium cellulosum 'So ce 56', complete genome - 1..13033779 9384 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 65 70.21 0 91201..92046 - 281 162448334 - sce0065 - hypothetical protein 66 70.98 0 92301..93923 + 540 162448335 yhjG1 sce0066 - pentachlorophenol monooxygenase 67 70.75 0 93993..94628 + 211 162448336 - sce0067 - TetR family transcriptional regulator 68 69.55 0 94679..95545 - 288 162448337 - sce0068 - chaperonin (heat shock protein 33) 69 72.09 0 95736..99995 - 1419 162448338 sdr sce0069 - cell surface SD repeat-containing protein 70 71.92 0 100009..101835 - 608 162448339 - sce0070 - outer membrane porin precursor 71 63.07 -1 102182..102793 + 203 162448340 sodA sce0071 - hypothetical protein 72 70.47 0 102798..103691 + 297 162448341 - sce0072 - acetyltransferase 73 68.16 0 103737..105071 - 444 162448342 argB1 sce0073 - acetylglutamate kinase 74 66.87 -1 105077..106078 - 333 162448343 argF1 sce0074 - N-acetylornithine carbamoyltransferase 75 69.55 0 106568..106879 + 103 162448344 - sce0075 - hypothetical protein 76 69.32 0 107087..107614 + 175 162448345 - sce0076 - hypothetical protein 77 64.22 -1 107663..108070 + 135 162448346 - sce0077 - hypothetical protein 78 75.80 +1 108007..111771 - 1254 162448347 - sce0078 - ATP-dependent deoxyribonuclease subunit A 79 75.62 +1 112023..112982 + 319 162448348 chlG sce0079 - putative octaprenyltransferase 80 71.84 0 112979..113713 + 244 162448349 hemH1 sce0080 - ferrochelatase 81 77.45 +1 113710..114627 + 305 162448350 - sce0081 - hypothetical protein 82 72.71 0 114642..115352 + 236 162448351 - sce0082 - hypothetical protein 83 61.63 -2 115431..117158 - 575 162448353 - sce_pseudo_01 - pseudogene 84 70.35 0 117146..117607 + 153 162448352 - sce0083 - hypothetical protein 85 73.49 0 117802..119442 - 546 162448354 - sce0084 - hypothetical protein 86 70.39 0 120147..120764 - 205 162448355 leuD sce0085 - isopropylmalate isomerase small subunit 87 68.44 0 120792..122201 - 469 162448356 leuC1 sce0086 - isopropylmalate isomerase large subunit 88 75.22 +1 122434..123333 + 299 162448357 - sce0087 - LysR family transcriptional regulator 89 66.80 -1 123458..125002 - 514 162448358 guaB1 sce0088 - inositol-5-monophosphate dehydrogenase 90 69.07 0 125214..126254 - 346 162448359 - sce0089 - AraC family transcriptional regulator 91 64.75 -1 126521..127459 + 312 162448360 - sce0090 - transposase 92 70.05 0 127945..129066 - 373 162448361 - sce0091 - hypothetical protein 93 63.98 -1 129269..129715 - 148 162448362 - sce0092 - hypothetical protein 94 72.22 0 129992..130657 - 221 162448363 - sce0093 - hypothetical protein 95 71.85 0 130728..131711 + 327 162448364 - sce0094 - hypothetical protein 96 71.79 0 131794..132612 + 272 162448365 - sce0095 - hypothetical protein 97 62.26 -2 132730..133206 + 158 162448366 - sce0096 - hypothetical protein 98 67.94 0 133239..134099 - 286 162448367 - sce0097 - proline iminopeptidase 99 73.19 0 134226..135038 - 270 162448368 - sce0098 - putative carboxymethylenebutenolidase 100 66.67 -1 135035..135451 - 138 162448369 - sce0099 - PPE family protein 101 73.47 0 135403..136254 - 283 162448370 - sce0100 - putative carboxymethylenebutenolidase 102 70.63 0 136251..137234 - 327 162448371 tauD1 sce0101 - putative taurine dioxygenase 103 74.89 0 138053..138928 - 291 162448372 - sce0102 - hypothetical protein 104 68.84 0 138959..139372 - 137 162448373 - sce0103 - hypothetical protein 105 77.08 +1 139385..140143 - 252 162448374 - sce0104 - hypothetical protein 106 79.37 +2 140188..142281 - 697 162448375 - sce0105 - hypothetical protein 107 78.05 +1 142197..144533 - 778 162448376 - sce0106 - hypothetical protein 108 72.69 0 144591..147296 - 901 162448377 - sce0107 - hypothetical protein 109 71.94 0 147293..148753 - 486 162448378 - sce0108 - hypothetical protein 110 75.19 +1 148916..150511 - 531 162448379 - sce0109 - hypothetical protein 111 68.23 0 150812..151387 + 191 162448380 - sce0110 - hypothetical protein 112 69.25 0 151480..153801 + 773 162448381 - sce0111 - Rhs family carbohydrate-binding protein 113 66.05 -1 153798..155090 + 430 162448382 - sce0112 - hypothetical protein 114 66.08 -1 155341..156543 + 400 162448383 - sce0113 - hypothetical protein 115 67.06 0 156701..157972 + 423 162448384 - sce0114 - hypothetical protein 116 67.75 0 158075..159370 + 431 162448385 - sce0115 - hypothetical protein 117 77.21 +1 159493..161238 + 581 162448386 - sce0116 - putative amidase 118 71.26 0 161235..161930 + 231 162448387 - sce0117 - hypothetical protein 119 74.64 0 161995..162408 - 137 162448388 - sce0118 - hypothetical protein 120 72.14 0 162446..166753 - 1435 162448389 - sce0119 - putative cell surface protein 121 71.79 0 166750..168603 - 617 162448390 - sce0120 - putative ompA family protein 122 67.63 0 169078..169491 - 137 162448391 - sce0121 - hypothetical protein 123 69.95 0 169545..170762 + 405 162448392 cypA1 sce0122 - cytochrome P450 CYP109C1 124 73.95 0 171490..172491 + 333 162448393 - sce0123 - hypothetical protein 125 71.13 0 172643..174481 + 612 162448394 - sce0124 - putative sodium:solute transport protein 126 67.58 0 174594..176240 + 548 162448395 yagH sce0125 - 14-beta-D-xylan xylohydrolase 127 76.26 +1 176296..177702 - 468 162448396 - sce0126 - hypothetical protein 128 70.83 0 178072..180162 - 696 162448397 metG1 sce0127 - hypothetical protein 129 69.79 0 180218..181081 - 287 162448398 - sce0128 - hypothetical protein 130 65.07 -1 181318..182949 - 543 162448399 - sce0129 - hypothetical protein 131 67.06 0 183368..183874 + 168 162448400 - sce0130 - hypothetical protein 132 65.73 -1 183933..184253 - 106 162448401 - sce0131 - hypothetical protein 133 68.09 0 184391..185443 - 350 162448402 pflA1 sce0132 - pyruvate formate lyase activating enzyme 134 71.38 0 185535..186956 - 473 162448403 - sce0133 - hypothetical protein 135 74.53 0 187007..188023 + 338 162448404 - sce0134 - alcohol dehydrogenase, zinc-containing 136 76.89 +1 188045..189913 - 622 162448405 - sce0135 - hypothetical protein 137 69.71 0 189962..190948 - 328 162448406 - sce0136 - hypothetical protein 138 76.02 +1 191619..192206 - 195 162448407 - sce0137 - hypothetical protein 139 62.35 -2 192208..192462 - 84 162448408 - sce0138 - hypothetical protein 140 76.24 +1 192625..193533 + 302 162448409 - sce0139 - hypothetical protein 141 73.87 0 193536..194312 + 258 162448410 - sce0140 - putative secreted protein 142 75.42 +1 194309..195211 + 300 162448411 - sce0141 - hypothetical protein 143 80.54 +2 195208..195762 + 184 162448412 - sce0142 - hypothetical protein 144 78.11 +1 196892..198928 + 678 162448413 - sce0143 - hypothetical protein 145 68.97 0 199500..200717 - 405 162448414 - sce0144 - hypothetical protein 146 69.96 0 201652..201894 - 80 162448415 - sce0145 - hypothetical protein 147 71.66 0 201891..202451 - 186 162448416 - sce0146 - hypothetical protein 148 65.18 -1 203230..204171 - 313 162448417 - sce0147 - hypothetical protein 149 69.92 0 204527..205540 + 337 162448418 - sce0148 - hypothetical protein 150 57.72 -2 205673..206164 + 163 162448419 - sce0149 - hypothetical protein 151 53.49 -2 206161..207207 + 348 162448420 - sce0150 - protein kinase 152 72.60 0 207608..208231 - 207 162448421 - sce0151 - hypothetical protein 153 76.33 +1 208661..211546 + 961 162448422 - sce0152 - polynucleotide adenyltransferase 154 69.79 0 211560..212327 - 255 162448423 - sce0153 - putative secreted protein 155 72.34 0 212456..213283 - 275 162448424 - sce0154 - hypothetical protein 156 73.15 0 213610..214272 - 220 162448425 - sce0155 - putative secreted protein 157 72.63 0 214412..215836 - 474 162448426 dapE1 sce0156 - succinyl-diaminopimelate desuccinylase 158 72.78 0 216066..217325 - 419 162448427 - sce0157 - hypothetical protein 159 64.49 -1 217577..218311 + 244 162448428 - sce0158 - hypothetical protein 160 68.09 0 218642..219346 + 234 162448429 pcxB sce0159 - dioxygenase 161 70.78 0 219343..219780 + 145 162448430 - sce0160 - hypothetical protein 162 70.49 0 219835..220671 - 278 162448431 - sce0161 - AraC family transcriptional regulator 163 68.33 0 220894..221553 - 219 162448432 - sce0162 - hypothetical protein 164 71.11 0 221575..222339 - 254 162448433 - sce0163 - hypothetical protein 71.02 MEAN 4.11 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.