version 1.0
Silicibacter sp. TM1040, complete genome - 1..3200938 3030 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 703 60.12 0 752089..754533 + 814 99080544 - TM1040_0703 - RNA binding S1 704 63.85 +1 754656..756002 - 448 99080545 - TM1040_0704 - hypothetical protein 705 61.18 0 756188..756643 - 151 99080546 - TM1040_0705 - hypothetical protein 706 58.95 0 756633..759197 - 854 99080547 - TM1040_0706 - alanyl aminopeptidase 707 61.37 0 759629..761062 - 477 99080548 - TM1040_0707 - NAD(P) transhydrogenase, beta subunit 708 61.46 0 761076..762650 - 524 99080549 pntA TM1040_0708 - NAD(P) transhydrogenase subunit alpha 709 51.32 -2 762745..762972 + 75 99080550 - TM1040_0709 - hypothetical protein 710 61.36 0 762988..763779 - 263 99080551 - TM1040_0710 - peptidase C26 711 60.85 0 763923..766052 - 709 99080552 - TM1040_0711 - malate synthase G 712 61.75 0 766372..767652 + 426 99080553 - TM1040_0712 - hypothetical protein 713 62.74 0 767742..768734 - 330 99080554 - TM1040_0713 - binding-protein-dependent transport systems inner membrane component 714 58.73 0 768727..769734 - 335 99080555 - TM1040_0714 - binding-protein-dependent transport systems inner membrane component 715 60.54 0 769931..771628 - 565 99080556 - TM1040_0715 - extracellular solute-binding protein 716 59.47 0 771989..773809 + 606 99080557 - TM1040_0716 - ABC transporter related 717 61.01 0 773813..774979 + 388 99080558 - TM1040_0717 - acetylornithine deacetylase 718 60.87 0 775182..776354 + 390 99080559 - TM1040_0718 - peptidase M20D, amidohydrolase 719 59.97 0 776435..777598 + 387 99080560 - TM1040_0719 - peptidase M20D, amidohydrolase 720 54.69 -1 777706..778089 - 127 99080561 - TM1040_0720 - hypothetical protein 721 58.27 0 778374..778766 - 130 99080562 - TM1040_0721 - hypothetical protein 722 61.45 0 779020..780093 - 357 99080563 - TM1040_0722 - glycosyl transferase, group 1 723 63.52 0 780104..781408 - 434 99080564 - TM1040_0723 - three-deoxy-D-manno-octulosonic-acid transferase-like 724 59.82 0 781420..782427 - 335 99080565 moaA TM1040_0724 - molybdenum cofactor biosynthesis protein A 725 63.73 +1 782613..783122 + 169 99080566 - TM1040_0725 - hypothetical protein 726 60.32 0 783149..783826 - 225 99080567 - TM1040_0726 - hypothetical protein 727 61.36 0 783823..785631 - 602 99080568 - TM1040_0727 - D-fructose-6-phosphate amidotransferase 728 62.52 0 785636..786985 - 449 99080569 - TM1040_0728 - UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase 729 63.72 +1 787121..787798 + 225 99080570 - TM1040_0729 - HAD family hydrolase 730 61.00 0 787842..788300 - 152 99080571 - TM1040_0730 - hypothetical protein 731 61.66 0 788430..789647 + 405 99080572 - TM1040_0731 - DegT/DnrJ/EryC1/StrS aminotransferase 732 59.28 0 789814..790977 + 387 99080573 - TM1040_0732 - isovaleryl-CoA dehydrogenase 733 62.39 0 790985..791335 + 116 99080574 - TM1040_0733 - hypothetical protein 734 60.86 0 791464..792066 - 200 99080575 - TM1040_0734 - OmpW 735 62.75 0 792161..793741 + 526 99080576 - TM1040_0735 - AMP-dependent synthetase and ligase 736 55.31 -1 793741..794145 + 134 99080577 - TM1040_0736 - hypothetical protein 737 62.87 0 794142..795746 + 534 99080578 - TM1040_0737 - propionyl-CoA carboxylase 738 63.36 0 795827..797764 + 645 99080579 - TM1040_0738 - 3-methylcrotonoyl-CoA carboxylase, alpha subunit 739 61.94 0 797797..798663 + 288 99080580 - TM1040_0739 - hydroxymethylglutaryl-CoA lyase 740 63.99 +1 798693..799478 + 261 99080581 - TM1040_0740 - enoyl-CoA hydratase 741 53.55 -2 799720..800085 + 121 99080582 - TM1040_0741 - NADH dehydrogenase subunit A 742 60.95 0 800085..800609 + 174 99080583 - TM1040_0742 - NADH dehydrogenase subunit B 743 59.41 0 800625..801230 + 201 99080584 - TM1040_0743 - NADH dehydrogenase subunit C 744 59.65 0 801379..802590 + 403 99080585 - TM1040_0744 - NADH dehydrogenase subunit D 745 56.36 -1 802587..803081 + 164 99080586 - TM1040_0745 - hypothetical protein 746 60.65 0 803081..804277 + 398 99080587 - TM1040_0746 - NADH dehydrogenase subunit E 747 59.31 0 804336..804566 + 76 99080588 - TM1040_0747 - hypothetical protein 748 60.51 0 804573..805871 + 432 99080589 - TM1040_0748 - NADH dehydrogenase I subunit F 749 58.06 0 805880..806239 + 119 99080590 - TM1040_0749 - hypothetical protein 750 56.56 -1 806338..806802 + 154 99080591 - TM1040_0750 - hypothetical protein 751 61.88 0 806806..808788 + 660 99080592 - TM1040_0751 - NADH dehydrogenase subunit G 752 59.03 0 808785..809177 + 130 99080593 - TM1040_0752 - putative lipoprotein 753 58.86 0 809184..810221 + 345 99080594 - TM1040_0753 - NADH dehydrogenase subunit H 754 59.80 0 810223..810717 + 164 99080595 - TM1040_0754 - NADH dehydrogenase subunit I 755 60.27 0 810750..811124 + 124 99080596 - TM1040_0755 - carboxymuconolactone decarboxylase 756 58.87 0 811121..811723 + 200 99080597 - TM1040_0756 - NADH dehydrogenase subunit J 757 54.58 -1 811738..812043 + 101 99080598 - TM1040_0757 - NADH dehydrogenase subunit K 758 58.46 0 812049..814169 + 706 99080599 - TM1040_0758 - NADH dehydrogenase subunit L 759 57.85 0 814169..815734 + 521 99080600 - TM1040_0759 - NADH dehydrogenase subunit M 760 59.85 0 815747..817183 + 478 99080601 - TM1040_0760 - NADH dehydrogenase subunit N 761 64.00 +1 817272..818021 + 249 99080602 - TM1040_0761 - biotin--acetyl-CoA-carboxylase ligase 762 58.88 0 818036..818818 + 260 99080603 - TM1040_0762 - pantothenate kinase 763 60.67 0 818815..820482 + 555 99080604 - TM1040_0763 - beta-lactamase-like 764 64.24 +1 820756..821496 - 246 99080605 - TM1040_0764 - triosephosphate isomerase 765 58.76 0 821644..821997 - 117 99080606 - TM1040_0765 - HesB/YadR/YfhF 766 56.75 -1 822118..822480 - 120 99080607 - TM1040_0766 - hypothetical protein 767 60.44 0 822656..822928 - 90 99080608 - TM1040_0767 - hypothetical protein 768 58.33 0 822928..823815 - 295 99080609 - TM1040_0768 - SPFH domain-containing protein/band 7 family protein 769 61.79 0 823906..825321 - 471 99080610 - TM1040_0769 - SSU ribosomal protein S6P modification protein 770 60.30 0 825392..826522 + 376 99080611 - TM1040_0770 - queuine tRNA-ribosyltransferase 771 60.07 0 826781..827053 - 90 99080612 - TM1040_0771 - hypothetical protein 772 54.12 -1 827050..827559 - 169 99080613 - TM1040_0772 - hypothetical protein 773 61.33 0 827885..828559 + 224 99080614 - TM1040_0773 - NADH:flavin oxidoreductase/NADH oxidase 774 59.85 0 828617..828880 + 87 99080615 - TM1040_0774 - Oye family NADH-dependent flavin oxidoreductase 775 58.70 0 829194..831602 + 802 99080616 - TM1040_0775 - Lon-A peptidase 776 58.81 0 832173..833177 - 334 99080617 - TM1040_0776 - phage integrase 777 56.76 -1 833487..833819 - 110 99080618 - TM1040_0777 - hypothetical protein 778 58.20 0 833924..834868 - 314 99080619 - TM1040_0778 - hypothetical protein 779 61.21 0 834865..835524 - 219 99080620 - TM1040_0779 - hypothetical protein 780 53.23 -2 835670..836443 - 257 99080621 - TM1040_0780 - hypothetical protein 781 60.78 0 836465..836770 - 101 99080622 - TM1040_0781 - hypothetical protein 782 63.49 0 836839..837342 - 167 99080623 - TM1040_0782 - hypothetical protein 783 58.62 0 837342..837950 - 202 99080624 - TM1040_0783 - exonuclease 784 59.34 0 837950..838672 - 240 99080625 - TM1040_0784 - ERF 785 64.63 +1 838781..839026 - 81 99080626 - TM1040_0785 - hypothetical protein 786 57.78 0 839240..839599 - 119 99080627 - TM1040_0786 - hypothetical protein 787 51.91 -2 839907..840665 - 252 99080628 - TM1040_0787 - hypothetical protein 788 51.12 -2 840662..841195 - 177 99080629 - TM1040_0788 - hypothetical protein 789 56.62 -1 841219..841935 - 238 99080630 - TM1040_0789 - putative phage repressor 790 59.10 0 842213..842701 + 162 99080631 - TM1040_0790 - hypothetical protein 791 64.03 +1 842939..843241 + 100 99080632 - TM1040_0791 - hypothetical protein 792 57.66 0 843244..843765 + 173 99080633 - TM1040_0792 - hypothetical protein 793 61.90 0 843762..844118 + 118 99080634 - TM1040_0793 - endodeoxyribonuclease RusA 794 60.38 0 844130..844861 + 243 99080635 - TM1040_0794 - hypothetical protein 795 62.41 0 844851..845414 + 187 99080636 - TM1040_0795 - hypothetical protein 796 59.58 0 845629..846108 + 159 99080637 - TM1040_0796 - single-strand binding protein 797 60.00 0 846108..846362 + 84 99080638 - TM1040_0797 - hypothetical protein 798 57.90 0 846385..846966 + 193 99080639 - TM1040_0798 - hypothetical protein 799 58.06 0 847447..847725 - 92 99080640 - TM1040_0799 - hypothetical protein 800 58.03 0 847787..848365 + 192 99080641 - TM1040_0800 - terminase small subunit 801 60.91 0 848343..849593 + 416 99080642 - TM1040_0801 - hypothetical protein 802 61.09 0 849590..850969 + 459 99080643 - TM1040_0802 - hypothetical protein 60.41 MEAN 3.16 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0