version 1.0
Silicibacter sp. TM1040, complete genome - 1..3200938 3030 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1620 57.58 0 1727837..1728298 - 153 99081461 - TM1040_1620 - hypothetical protein 1621 64.07 +1 1728295..1728756 - 153 99081462 - TM1040_1621 - hypothetical protein 1622 61.89 0 1728820..1730139 - 439 99081463 - TM1040_1622 - hypothetical protein 1623 64.35 +1 1730142..1731089 - 315 99081464 - TM1040_1623 - serine peptidase 1624 58.28 0 1731086..1732372 - 428 99081465 - TM1040_1624 - Phage portal protein, HK97 1625 60.02 0 1732375..1734075 - 566 99081466 - TM1040_1625 - phage terminase 1626 57.69 0 1734086..1734631 - 181 99081467 - TM1040_1626 - hypothetical protein 1627 56.70 -1 1734735..1735055 + 106 99081468 - TM1040_1627 - hypothetical protein 1628 60.81 0 1735346..1735738 + 130 99081469 - TM1040_1628 - hypothetical protein 1629 60.11 0 1736144..1738018 - 624 99081470 - TM1040_1629 - hypothetical protein 1630 60.99 0 1738048..1738329 - 93 99081471 - TM1040_1630 - hypothetical protein 1631 60.02 0 1738333..1739175 - 280 99081472 - TM1040_1631 - hypothetical protein 1632 61.04 0 1739172..1739651 - 159 99081473 - TM1040_1632 - hypothetical protein 1633 58.16 0 1739641..1740522 - 293 99081474 - TM1040_1633 - hypothetical protein 1634 56.63 -1 1740519..1740797 - 92 99081475 - TM1040_1634 - hypothetical protein 1635 61.22 0 1740964..1741440 - 158 99081476 - TM1040_1635 - hypothetical protein 1636 54.24 -1 1741814..1742167 + 117 99081477 - TM1040_1636 - XRE family transcriptional regulator 1637 51.02 -2 1742333..1743016 + 227 99081478 - TM1040_1637 - hypothetical protein 1638 50.39 -2 1742974..1743864 - 296 99081479 - TM1040_1638 - hypothetical protein 1639 63.37 0 1744087..1744389 + 100 99081480 - TM1040_1639 - hypothetical protein 1640 57.02 -1 1744698..1745402 + 234 99081481 - TM1040_1640 - hypothetical protein 1641 59.10 0 1745594..1745950 + 118 99081482 - TM1040_1641 - hypothetical protein 1642 59.40 0 1745947..1747818 + 623 99081483 - TM1040_1642 - ParB-like nuclease 1643 55.16 -1 1748176..1748427 + 83 99081484 - TM1040_1643 - hypothetical protein 1644 56.61 -1 1748417..1749649 + 410 99081485 - TM1040_1644 - hypothetical protein 1645 63.55 0 1750371..1751012 - 213 99081486 - TM1040_1645 - resolvase-like protein 1646 55.43 -1 1751144..1751659 + 171 99081487 - TM1040_1646 - hypothetical protein 1647 58.39 0 1751638..1752096 - 152 99081488 - TM1040_1647 - hypothetical protein 1648 56.70 -1 1752165..1752485 - 106 99081489 - TM1040_1648 - hypothetical protein 1649 58.65 0 1752567..1752965 - 132 99081490 - TM1040_1649 - hypothetical protein 1650 61.23 0 1752962..1753771 - 269 99081491 - TM1040_1650 - hypothetical protein 1651 61.84 0 1753773..1754207 - 144 99081492 - TM1040_1651 - hypothetical protein 1652 59.30 0 1754204..1754461 - 85 99081493 - TM1040_1652 - hypothetical protein 1653 61.21 0 1754507..1754854 - 115 99081494 - TM1040_1653 - hypothetical protein 1654 58.77 0 1754832..1755464 - 210 99081495 - TM1040_1654 - hypothetical protein 1655 50.60 -2 1755461..1756456 - 331 99081496 - TM1040_1655 - hypothetical protein 1656 56.51 -1 1756975..1757919 - 314 99081497 - TM1040_1656 - hypothetical protein 1657 58.52 0 1757916..1762442 - 1508 99081498 - TM1040_1657 - hypothetical protein 1658 50.44 -2 1762471..1762809 + 112 99081499 - TM1040_1658 - hypothetical protein 1659 52.95 -2 1762850..1763731 - 293 99081500 - TM1040_1659 - hypothetical protein 1660 60.47 0 1763994..1764332 - 112 99081501 - TM1040_1660 - hypothetical protein 1661 54.22 -1 1764431..1764880 - 149 99081502 - TM1040_1661 - hypothetical protein 1662 59.11 0 1764979..1765428 - 149 99081503 - TM1040_1662 - hypothetical protein 1663 56.84 -1 1765489..1765773 - 94 99081504 - TM1040_1663 - hypothetical protein 1664 60.46 0 1765815..1766120 - 101 99081505 - TM1040_1664 - hypothetical protein 1665 59.65 0 1766168..1766623 - 151 99081506 - TM1040_1665 - hypothetical protein 1666 61.36 0 1766620..1766958 - 112 99081507 - TM1040_1666 - hypothetical protein 1667 67.36 +2 1766958..1767530 - 190 99081508 - TM1040_1667 - phiE125 gp8 hypothetical protein 1668 62.54 0 1767772..1768983 - 403 99081509 - TM1040_1668 - phage major capsid protein, HK97 1669 61.57 0 1769008..1769694 - 228 99081510 - TM1040_1669 - prohead peptidase 1670 58.91 0 1769678..1770901 - 407 99081511 - TM1040_1670 - Phage portal protein, HK97 1671 59.43 0 1770902..1772683 - 593 99081512 - TM1040_1671 - phage terminase 1672 62.75 0 1772661..1773068 - 135 99081513 - TM1040_1672 - hypothetical protein 1673 58.33 0 1773573..1773896 + 107 99081514 - TM1040_1673 - hypothetical protein 1674 61.40 0 1774102..1774671 - 189 99081515 - TM1040_1674 - hypothetical protein 1675 60.24 0 1774694..1774942 - 82 99081516 - TM1040_1675 - hypothetical protein 1676 58.07 0 1774948..1775424 - 158 99081517 - TM1040_1676 - single-strand binding protein 1677 61.29 0 1775642..1776403 - 253 99081518 - TM1040_1677 - hypothetical protein 1678 62.18 0 1776938..1777294 - 118 99081519 - TM1040_1678 - endodeoxyribonuclease RusA 1679 56.72 -1 1777291..1777863 - 190 99081520 - TM1040_1679 - MT-A70 1680 63.70 +1 1777863..1778165 - 100 99081521 - TM1040_1680 - hypothetical protein 1681 62.16 0 1778403..1778846 - 147 99081522 - TM1040_1681 - hypothetical protein 1682 57.60 0 1779272..1779922 + 216 99081523 - TM1040_1682 - hypothetical protein 1683 49.63 -2 1779945..1780214 + 89 99081524 - TM1040_1683 - hypothetical protein 1684 54.48 -1 1780207..1780608 + 133 99081525 - TM1040_1684 - hypothetical protein 1685 54.45 -1 1780907..1781299 + 130 99081526 - TM1040_1685 - hypothetical protein 1686 59.47 0 1781513..1781776 + 87 99081527 - TM1040_1686 - hypothetical protein 1687 55.42 -1 1781885..1782862 + 325 99081528 - TM1040_1687 - hypothetical protein 1688 56.31 -1 1782883..1783587 + 234 99081529 - TM1040_1688 - hypothetical protein 1689 57.97 0 1783760..1784104 + 114 99081530 - TM1040_1689 - hypothetical protein 1690 60.85 0 1784101..1784478 + 125 99081531 - TM1040_1690 - HNH nuclease 1691 61.13 0 1784602..1786695 + 697 99081532 - TM1040_1691 - C-5 cytosine-specific DNA methylase 1692 56.26 -1 1787053..1788099 + 348 99081533 - TM1040_1692 - phage integrase 1693 60.29 0 1788393..1789004 - 203 99081534 - TM1040_1693 - tetratricopeptide TPR_2 1694 59.96 0 1789014..1789490 - 158 99081535 - TM1040_1694 - AsnC family transcriptional regulator 1695 62.97 0 1789603..1793010 + 1135 99081536 - TM1040_1695 - bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 1696 59.40 0 1793112..1793882 + 256 99081537 - TM1040_1696 - rhomboid-like protein 1697 62.02 0 1793908..1794294 + 128 99081538 - TM1040_1697 - glutathione-dependent formaldehyde-activating, GFA 1698 60.56 0 1794466..1795251 - 261 99081539 - TM1040_1698 - inositol monophosphatase 1699 60.38 0 1795432..1796337 - 301 99081540 - TM1040_1699 - LysR family transcriptional regulator 1700 60.92 0 1796495..1797364 + 289 99081541 - TM1040_1700 - 5,10-methylenetetrahydrofolate reductase 1701 60.46 0 1797423..1797905 + 160 99081542 - TM1040_1701 - phenylacetic acid degradation-related protein 1702 62.79 0 1797922..1798926 - 334 99081543 - TM1040_1702 - hypothetical protein 1703 60.42 0 1798978..1799601 + 207 99081544 - TM1040_1703 - GCN5-related N-acetyltransferase 1704 61.69 0 1799623..1800708 - 361 99081545 - TM1040_1704 - hypothetical protein 1705 61.30 0 1800686..1802995 - 769 99081546 - TM1040_1705 - xanthine dehydrogenase, molybdenum binding subunit apoprotein 1706 59.69 0 1803784..1806879 + 1031 99081547 valS TM1040_1706 - valyl-tRNA synthetase 1707 57.48 0 1807090..1807383 + 97 99081548 - TM1040_1707 - hypothetical protein 1708 64.05 +1 1807406..1807864 + 152 99081549 - TM1040_1708 - hypothetical protein 1709 62.39 0 1807873..1808316 + 147 99081550 - TM1040_1709 - hypothetical protein 1710 64.59 +1 1808313..1809083 + 256 99081551 - TM1040_1710 - hypothetical protein 1711 59.10 0 1809264..1810043 + 259 99081552 - TM1040_1711 - ABC transporter related 1712 61.16 0 1810083..1810790 + 235 99081553 - TM1040_1712 - extracellular solute-binding protein 1713 61.06 0 1810884..1811792 + 302 99081554 - TM1040_1713 - binding-protein-dependent transport systems inner membrane component 1714 58.74 0 1811789..1812595 + 268 99081555 - TM1040_1714 - amino acid ABC transporter permease 1715 56.83 -1 1812653..1814482 - 609 99081556 - TM1040_1715 - Poly(R)-hydroxyalkanoic acid synthase, class I 1716 59.12 0 1814631..1815902 + 423 99081557 - TM1040_1716 - polyhydroxyalkanoate depolymerase, intracellular 1717 62.79 0 1815914..1816507 + 197 99081558 - TM1040_1717 - hypothetical protein 1718 61.69 0 1816511..1817314 - 267 99081559 - TM1040_1718 - alpha/beta fold family hydrolase/acetyltransferase 1719 60.33 0 1817526..1817951 - 141 99081560 - TM1040_1719 - glyoxalase/bleomycin resistance protein/dioxygenase 60.41 MEAN 3.16 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0