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Sinorhizobium medicae WSM419, complete genome - 1..3781904 3529 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 699 67.70 +2 758891..759859 - 322 150395927 - Smed_0703 - hypothetical protein 700 64.80 +1 759849..760385 - 178 150395928 - Smed_0704 - hypothetical protein 701 64.36 0 760388..760993 - 201 150395929 - Smed_0705 - hypothetical protein 702 63.84 0 760993..761841 - 282 150395930 - Smed_0706 - glycine cleavage T protein (aminomethyl transferase) 703 63.86 0 761951..762697 - 248 150395931 - Smed_0707 - hypothetical protein 704 60.00 0 762713..762982 - 89 150395932 - Smed_0708 - hypothetical protein 705 62.39 0 763140..763583 - 147 150395933 - Smed_0709 - putative signal peptide protein 706 65.38 +1 763580..764044 - 154 150395934 - Smed_0710 - NUDIX hydrolase 707 63.81 0 764103..764873 + 256 150395935 - Smed_0711 - hypothetical protein 708 58.67 -1 764912..765061 - 49 150395936 - Smed_0712 - hypothetical protein 709 62.03 0 765466..766866 + 466 150395937 cysS Smed_0713 - cysteinyl-tRNA synthetase 710 63.77 0 766903..767385 + 160 150395938 - Smed_0714 - glutathione-dependent formaldehyde-activating GFA 711 61.67 0 767382..767861 + 159 150395939 - Smed_0715 - glutathione-dependent formaldehyde-activating GFA 712 61.88 0 767858..768358 + 166 150395940 - Smed_0716 - glutathione-dependent formaldehyde-activating GFA 713 63.55 0 768355..769317 + 320 150395941 - Smed_0717 - proline iminopeptidase 714 60.48 0 769374..770990 + 538 150395942 - Smed_0718 - alpha-isopropylmalate/homocitrate synthase family transferase 715 59.87 0 771249..772190 + 313 150395943 - Smed_0719 - transporter DMT superfamily protein 716 61.33 0 772222..772839 - 205 150395944 - Smed_0720 - hypothetical protein 717 65.62 +1 773082..774800 + 572 150395945 - Smed_0721 - peptidoglycan-binding LysM 718 60.67 0 775094..776977 + 627 150395946 - Smed_0722 - ABC transporter related 719 62.80 0 777084..777782 + 232 150395947 - Smed_0723 - phosphatidylserine decarboxylase 720 63.51 0 777792..778679 + 295 150395948 - Smed_0724 - CDP-diacylglycerol--serine O-phosphatidyltransferase 721 64.44 0 778954..780300 + 448 150395949 - Smed_0725 - transposase IS4 family protein 722 62.42 0 780355..781107 - 250 150395950 - Smed_0726 - short-chain dehydrogenase/reductase SDR 723 62.24 0 781107..782597 - 496 150395951 - Smed_0727 - amidophosphoribosyltransferase 724 64.65 +1 782743..783387 - 214 150395952 - Smed_0728 - colicin V production protein 725 64.46 0 783420..784823 - 467 150395953 - Smed_0729 - DNA repair protein RadA 726 64.47 0 784944..786170 - 408 150395954 - Smed_0730 - alanine racemase 727 61.19 0 786214..787071 + 285 150395955 - Smed_0731 - AraC family transcriptional regulator 728 66.67 +1 787191..787844 + 217 150395956 - Smed_0732 - AzlC family protein 729 67.99 +2 787841..788143 + 100 150395957 - Smed_0733 - branched-chain amino acid transport 730 60.53 0 788168..789667 - 499 150395958 - Smed_0734 - replicative DNA helicase 731 62.03 0 789989..790441 + 150 150395959 - Smed_0735 - MarR family transcriptional regulator 732 61.14 0 790438..792048 + 536 150395960 - Smed_0736 - major facilitator transporter 733 63.76 0 792065..793132 + 355 150395961 - Smed_0737 - secretion protein HlyD family protein 734 60.76 0 793256..793831 - 191 150395962 rplI Smed_0738 - 50S ribosomal protein L9 735 62.58 0 793866..794819 - 317 150395963 - Smed_0739 - hypothetical protein 736 62.65 0 795009..795257 - 82 150395964 rpsR Smed_0740 - 30S ribosomal protein S18 737 64.16 0 795283..795720 - 145 150395965 rpsF Smed_0741 - 30S ribosomal protein S6 738 61.86 0 796066..796398 + 110 150395966 - Smed_0742 - hypothetical protein 739 62.64 0 796425..797468 - 347 150395967 - Smed_0743 - aldo/keto reductase 740 64.02 0 797820..798764 + 314 150395968 - Smed_0744 - malonyl CoA-acyl carrier protein transacylase 741 59.62 0 798789..799526 + 245 150395969 - Smed_0745 - 3-ketoacyl-(acyl-carrier-protein) reductase NodG 742 54.85 -2 799846..800082 + 78 150395970 acpP Smed_0746 - acyl carrier protein 743 62.24 0 800391..801656 + 421 150395971 - Smed_0747 - 3-oxoacyl-(acyl carrier protein) synthase II 744 59.83 0 801944..803143 + 399 150395972 - Smed_0748 - aminodeoxychorismate lyase 745 66.00 +1 803185..804825 - 546 150395973 - Smed_0749 - thiamine pyrophosphate binding domain-containing protein 746 64.17 0 804827..805789 - 320 150395974 - Smed_0750 - cobalamin synthesis protein P47K 747 64.58 +1 805783..807510 - 575 150395975 - Smed_0751 - amidohydrolase 3 748 62.63 0 807545..809128 - 527 150395976 - Smed_0752 - hypothetical protein 749 62.27 0 809248..810156 + 302 150395977 - Smed_0753 - LysR family transcriptional regulator 750 62.18 0 810258..811349 + 363 150395978 - Smed_0754 - ABC transporter related 751 60.13 0 811404..812519 + 371 150395979 - Smed_0755 - ABC transporter, binding protein 752 62.23 0 812527..813360 + 277 150395980 - Smed_0756 - binding-protein-dependent transport systems inner membrane component 753 58.90 0 813363..814160 + 265 150395981 - Smed_0757 - binding-protein-dependent transport systems inner membrane component 754 62.95 0 814327..815214 + 295 150395982 - Smed_0758 - hypothetical protein 755 61.21 0 815218..815877 + 219 150395983 gmk Smed_0759 - guanylate kinase 756 64.73 +1 815897..816721 - 274 150395984 ksgA Smed_0760 - dimethyladenosine transferase 757 66.67 +1 816721..817749 - 342 150395985 pdxA Smed_0761 - 4-hydroxythreonine-4-phosphate dehydrogenase 758 61.08 0 817759..818706 - 315 150395986 - Smed_0762 - SurA domain-containing protein 759 60.70 0 818890..821235 - 781 150395987 - Smed_0763 - organic solvent tolerance protein 760 57.34 -1 821235..822317 - 360 150395988 - Smed_0764 - permease YjgP/YjgQ family protein 761 61.13 0 822314..823486 - 390 150395989 - Smed_0765 - permease YjgP/YjgQ family protein 762 62.52 0 823801..825294 + 497 150395990 - Smed_0766 - leucyl aminopeptidase 763 60.67 0 825314..825763 + 149 150395991 - Smed_0767 - DNA polymerase III subunit chi 764 61.49 0 825863..826789 - 308 150395992 - Smed_0768 - galactose 1-dehydrogenase 765 61.27 0 826902..827828 + 308 150395993 - Smed_0769 - GCN5-related N-acetyltransferase 766 62.49 0 827883..829772 - 629 150395994 - Smed_0770 - ABC transporter related 767 64.86 +1 830084..830359 + 91 150395995 - Smed_0771 - hypothetical protein 768 60.40 0 830628..833291 + 887 150395996 - Smed_0772 - AMP-dependent synthetase and ligase 769 61.79 0 833232..833744 - 170 150395997 - Smed_0773 - DinB family protein 770 59.71 0 834066..834755 + 229 150395998 - Smed_0774 - glutathione S-transferase domain-containing protein 771 60.05 0 834856..835278 + 140 150395999 ndk Smed_0775 - nucleoside diphosphate kinase 772 59.13 0 835327..835830 - 167 150396000 - Smed_0776 - hypothetical protein 773 66.31 +1 835827..836387 - 186 150396001 - Smed_0777 - hypothetical protein 774 62.88 0 836577..837473 + 298 150396002 - Smed_0778 - inner-membrane translocator 775 64.54 +1 837511..837981 - 156 150396003 - Smed_0779 - molybdopterin biosynthesis MoaE protein 776 64.37 0 837986..838246 - 86 150396004 - Smed_0780 - molybdopterin converting factor, subunit 1 777 59.01 0 838243..838830 - 195 150396005 - Smed_0781 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 778 63.21 0 839083..841107 - 674 150396006 uvrC Smed_0782 - excinuclease ABC subunit C 779 62.22 0 841104..841868 - 254 150396007 - Smed_0783 - short chain dehydrogenase 780 64.95 +1 842231..842869 + 212 150396008 - Smed_0784 - porin 781 56.49 -1 842958..843566 - 202 150396009 - Smed_0785 - glutathione S-transferase domain-containing protein 782 61.26 0 843563..844321 - 252 150396010 - Smed_0786 - ribonuclease T2 783 61.26 0 844375..844818 - 147 150396011 - Smed_0787 - putative signal peptide protein 784 60.69 0 844870..845739 - 289 150396012 - Smed_0788 - hypothetical protein 785 63.34 0 845808..847940 + 710 150396013 - Smed_0789 - nitrate reductase 786 60.64 0 847968..848564 + 198 150396014 - Smed_0790 - NUDIX hydrolase 787 61.99 0 848625..849287 - 220 150396015 purN Smed_0791 - phosphoribosylglycinamide formyltransferase 788 63.31 0 849318..850388 - 356 150396016 - Smed_0792 - phosphoribosylaminoimidazole synthetase 789 59.12 0 850609..851748 + 379 150396017 - Smed_0793 - hypothetical protein 790 64.35 0 851983..852672 + 229 150396018 - Smed_0794 - hypothetical protein 791 60.33 0 852737..854947 + 736 150396019 - Smed_0795 - polyphosphate kinase 792 61.68 0 854958..856481 + 507 150396020 - Smed_0796 - Ppx/GppA phosphatase 793 61.22 0 856612..857970 - 452 150396021 - Smed_0797 - putative signal peptide protein 794 63.16 0 858040..859122 - 360 150396022 - Smed_0798 - putative adenylate/guanylate cyclase 795 61.46 0 859173..860324 - 383 150396023 - Smed_0799 - ribonuclease D 796 64.60 +1 860428..861828 - 466 150396024 - Smed_0800 - multicopper oxidase type 3 797 61.33 0 861962..863197 - 411 150396025 - Smed_0801 - major facilitator transporter 798 62.19 0 863504..865291 + 595 150396026 aspS Smed_0802 - aspartyl-tRNA synthetase 61.69 MEAN 2.82 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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