version 1.0
Sinorhizobium medicae WSM419, complete genome - 1..3781904 3529 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 627 62.91 0 676148..677533 + 461 150395855 - Smed_0631 - integral membrane sensor signal transduction histidine kinase 628 68.90 +2 677790..678236 + 148 150395856 - Smed_0632 - putative outer-membranne lipoprotein 629 64.96 +1 678344..679513 + 389 150395857 - Smed_0633 - cytochrome C-type biogenesis transmembrane protein 630 62.47 0 679510..679962 + 150 150395858 - Smed_0634 - cytochrome c-type biogenesis protein CcmE 631 64.09 0 679959..681941 + 660 150395859 - Smed_0635 - cytochrome c-type biogenesis protein CcmF 632 63.38 0 681938..682393 + 151 150395860 - Smed_0636 - cytochrome C biogenesis protein 633 62.74 0 682614..684167 + 517 150395861 - Smed_0637 - protease Do 634 59.83 0 684311..685012 + 233 150395862 - Smed_0638 - two component transcriptional regulator 635 62.37 0 685009..686406 + 465 150395863 - Smed_0639 - integral membrane sensor signal transduction histidine kinase 636 62.85 0 686506..689463 + 985 150395864 - Smed_0640 - (glutamate--ammonia-ligase) adenylyltransferase 637 63.09 0 689473..691791 - 772 150395865 - Smed_0641 - multi-sensor signal transduction histidine kinase 638 61.88 0 692088..694742 - 884 150395866 - Smed_0642 - aminopeptidase N 639 61.24 0 695208..696146 + 312 150395867 - Smed_0643 - hypothetical protein 640 63.02 0 696167..697456 - 429 150395868 - Smed_0644 - major facilitator transporter 641 63.46 0 697723..697878 - 51 150395869 - Smed_0645 - hypothetical protein 642 67.26 +1 697916..698083 - 55 150395870 - Smed_0646 - hypothetical protein 643 63.91 0 698202..699071 - 289 150395871 - Smed_0647 - phage SPO1 DNA polymerase-related protein 644 60.78 0 699160..700449 - 429 150395872 - Smed_0648 - putative heat shock protein 645 62.88 0 700717..702381 + 554 150395873 - Smed_0649 - electron-transferring-flavoprotein dehydrogenase 646 60.66 0 702769..703767 + 332 150395874 - Smed_0650 - substrate-binding region of ABC-type glycine betaine transport system 647 56.76 -1 703967..704854 + 295 150395875 - Smed_0651 - binding-protein-dependent transport systems inner membrane component 648 62.03 0 704948..705961 - 337 150395876 - Smed_0652 - zinc-binding alcohol dehydrogenase 649 61.44 0 706062..706463 + 133 150395877 - Smed_0653 - HxlR family transcriptional regulator 650 59.12 0 706579..707505 + 308 150395878 - Smed_0654 - diacylglycerol kinase catalytic region 651 61.54 0 707521..709002 - 493 150395879 - Smed_0655 - glycosyl transferase family protein 652 61.31 0 708995..709984 - 329 150395880 - Smed_0656 - glycosyl transferase family protein 653 63.30 0 710109..711059 + 316 150395881 - Smed_0657 - hypothetical protein 654 60.94 0 711165..712667 - 500 150395882 - Smed_0658 - AMP nucleosidase 655 64.17 0 712795..713115 - 106 150395883 - Smed_0659 - hypothetical protein 656 60.34 0 713190..713363 - 57 150395884 - Smed_0660 - hypothetical protein 657 58.05 -1 713377..713550 - 57 150395885 - Smed_0661 - hypothetical protein 658 59.40 0 713791..714492 + 233 150395886 - Smed_0662 - glutathione S-transferase domain-containing protein 659 62.87 0 714583..714924 - 113 150395887 - Smed_0663 - hypothetical protein 660 64.04 0 715521..715787 + 88 150395888 - Smed_0664 - Sel1 domain-containing protein 661 61.14 0 715869..716990 - 373 150395889 - Smed_0665 - histidinol-phosphate aminotransferase 662 54.13 -2 717375..717677 + 100 150395890 - Smed_0666 - hypothetical protein 663 55.31 -2 717880..718548 + 222 150395891 - Smed_0667 - hypothetical protein 664 60.21 0 719074..720111 + 345 150395892 - Smed_0668 - porin 665 57.27 -1 720394..721425 - 343 150395893 - Smed_0669 - phage integrase family protein 666 59.87 0 721501..722559 - 352 150395894 - Smed_0670 - porin 667 61.81 0 722770..723243 - 157 150395895 - Smed_0671 - BA14K family protein 668 64.33 0 723414..725471 - 685 150395896 - Smed_0672 - lytic transglycosylase catalytic 669 60.23 0 725763..726647 + 294 150395897 - Smed_0673 - dihydrodipicolinate synthase 670 60.00 0 726647..727126 + 159 150395898 smpB Smed_0674 - SsrA-binding protein 671 59.11 0 727344..727925 - 193 150395899 - Smed_0675 - hypothetical protein 672 62.25 0 728394..728801 + 135 150395900 - Smed_0676 - DNA-directed RNA polymerase subunit omega 673 60.65 0 728903..731128 + 741 150395901 - Smed_0677 - (p)ppGpp synthetase I, SpoT/RelA 674 52.94 -2 731343..731495 + 50 150395902 - Smed_0678 - hypothetical protein 675 61.77 0 731621..732253 + 210 150395903 - Smed_0679 - hypothetical protein 676 62.38 0 732250..732669 + 139 150395904 acpS Smed_0680 - 4'-phosphopantetheinyl transferase 677 58.20 -1 732830..733573 + 247 150395905 - Smed_0681 - signal peptidase I 678 60.95 0 733573..734289 + 238 150395906 - Smed_0682 - ribonuclease III 679 61.63 0 734298..735230 + 310 150395907 era Smed_0683 - GTP-binding protein Era 680 62.66 0 735437..736435 - 332 150395908 - Smed_0684 - glycerophosphoryl diester phosphodiesterase 681 56.72 -1 736931..738187 + 418 150395909 - Smed_0685 - cyclopropane-fatty-acyl-phospholipid synthase 682 64.46 0 738473..740779 + 768 150395910 - Smed_0686 - RNA-binding S1 domain-containing protein 683 60.47 0 740947..741333 + 128 150395911 - Smed_0687 - putative signal peptide protein 684 61.34 0 741511..742824 - 437 150395912 - Smed_0688 - UDP-glucose 6-dehydrogenase 685 60.33 0 742955..743980 - 341 150395913 - Smed_0689 - NAD-dependent epimerase/dehydratase 686 62.46 0 744051..744383 - 110 150395914 - Smed_0690 - regulatory protein ArsR 687 60.46 0 744435..744917 + 160 150395915 - Smed_0691 - activator of Hsp90 ATPase 1 family protein 688 59.50 0 744929..745291 + 120 150395916 - Smed_0692 - hypothetical protein 689 64.13 0 745518..746267 + 249 150395917 recO Smed_0693 - DNA repair protein RecO 690 61.98 0 746298..748301 - 667 150395918 - Smed_0694 - hypothetical protein 691 65.66 +1 748540..751320 + 926 150395919 - Smed_0695 - hypothetical protein 692 64.38 0 751317..751973 + 218 150395920 - Smed_0696 - metal dependent phosphohydrolase 693 64.55 +1 752052..752903 + 283 150395921 - Smed_0697 - MOSC domain-containing protein 694 62.79 0 753031..754269 + 412 150395922 - Smed_0698 - major facilitator transporter 695 59.63 0 754451..755530 + 359 150395923 - Smed_0699 - quinolinate synthetase 696 66.04 +1 755648..757246 + 532 150395924 - Smed_0700 - L-aspartate oxidase 697 64.33 0 757296..758195 + 299 150395925 - Smed_0701 - nicotinate-nucleotide pyrophosphorylase 698 62.24 0 758299..758817 + 172 150395926 - Smed_0702 - superoxide dismutase copper/zinc binding 699 67.70 +2 758891..759859 - 322 150395927 - Smed_0703 - hypothetical protein 700 64.80 +1 759849..760385 - 178 150395928 - Smed_0704 - hypothetical protein 701 64.36 0 760388..760993 - 201 150395929 - Smed_0705 - hypothetical protein 702 63.84 0 760993..761841 - 282 150395930 - Smed_0706 - glycine cleavage T protein (aminomethyl transferase) 703 63.86 0 761951..762697 - 248 150395931 - Smed_0707 - hypothetical protein 704 60.00 0 762713..762982 - 89 150395932 - Smed_0708 - hypothetical protein 705 62.39 0 763140..763583 - 147 150395933 - Smed_0709 - putative signal peptide protein 706 65.38 +1 763580..764044 - 154 150395934 - Smed_0710 - NUDIX hydrolase 707 63.81 0 764103..764873 + 256 150395935 - Smed_0711 - hypothetical protein 708 58.67 -1 764912..765061 - 49 150395936 - Smed_0712 - hypothetical protein 709 62.03 0 765466..766866 + 466 150395937 cysS Smed_0713 - cysteinyl-tRNA synthetase 710 63.77 0 766903..767385 + 160 150395938 - Smed_0714 - glutathione-dependent formaldehyde-activating GFA 711 61.67 0 767382..767861 + 159 150395939 - Smed_0715 - glutathione-dependent formaldehyde-activating GFA 712 61.88 0 767858..768358 + 166 150395940 - Smed_0716 - glutathione-dependent formaldehyde-activating GFA 713 63.55 0 768355..769317 + 320 150395941 - Smed_0717 - proline iminopeptidase 714 60.48 0 769374..770990 + 538 150395942 - Smed_0718 - alpha-isopropylmalate/homocitrate synthase family transferase 715 59.87 0 771249..772190 + 313 150395943 - Smed_0719 - transporter DMT superfamily protein 716 61.33 0 772222..772839 - 205 150395944 - Smed_0720 - hypothetical protein 717 65.62 +1 773082..774800 + 572 150395945 - Smed_0721 - peptidoglycan-binding LysM 718 60.67 0 775094..776977 + 627 150395946 - Smed_0722 - ABC transporter related 719 62.80 0 777084..777782 + 232 150395947 - Smed_0723 - phosphatidylserine decarboxylase 720 63.51 0 777792..778679 + 295 150395948 - Smed_0724 - CDP-diacylglycerol--serine O-phosphatidyltransferase 721 64.44 0 778954..780300 + 448 150395949 - Smed_0725 - transposase IS4 family protein 722 62.42 0 780355..781107 - 250 150395950 - Smed_0726 - short-chain dehydrogenase/reductase SDR 723 62.24 0 781107..782597 - 496 150395951 - Smed_0727 - amidophosphoribosyltransferase 724 64.65 +1 782743..783387 - 214 150395952 - Smed_0728 - colicin V production protein 725 64.46 0 783420..784823 - 467 150395953 - Smed_0729 - DNA repair protein RadA 726 64.47 0 784944..786170 - 408 150395954 - Smed_0730 - alanine racemase 61.69 MEAN 2.82 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0