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Sinorhizobium medicae WSM419, complete genome - 1..3781904 3529 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 580 64.65 +1 633195..634235 - 346 150395808 - Smed_0584 - alcohol dehydrogenase 581 63.27 0 634388..635269 + 293 150395809 - Smed_0585 - aminotransferase 582 63.02 0 635289..635699 - 136 150395810 - Smed_0586 - glyoxalase/bleomycin resistance protein/dioxygenase 583 56.22 -1 635936..636538 + 200 150395811 - Smed_0587 - superoxide dismutase 584 64.71 +1 636764..637477 - 237 150395812 - Smed_0588 - helix-turn-helix type 11 domain-containing protein 585 62.28 0 637606..638244 + 212 150395813 - Smed_0589 - lysine exporter protein LysE/YggA 586 60.40 0 638442..638888 + 148 150395814 - Smed_0590 - cytochrome c class II 587 63.60 0 639016..639960 + 314 150395815 - Smed_0591 - gluconate 2-dehydrogenase (acceptor) 588 65.28 +1 639980..640483 - 167 150395816 - Smed_0592 - GCN5-related N-acetyltransferase 589 61.84 0 640675..641088 - 137 150395817 - Smed_0593 - MerR family transcriptional regulator 590 63.64 0 641373..642263 + 296 150395818 - Smed_0594 - Beta-lactamase 591 62.72 0 642324..644654 - 776 150395819 - Smed_0595 - quinoprotein glucose dehydrogenase 592 62.36 0 644934..646487 - 517 150395820 - Smed_0596 - hypothetical protein 593 61.82 0 646566..647534 - 322 150395821 - Smed_0597 - homocysteine S-methyltransferase 594 63.65 0 647681..648211 - 176 150395822 - Smed_0598 - hypothetical protein 595 61.02 0 648224..650332 - 702 150395823 - Smed_0599 - oligopeptidase B 596 63.34 0 650504..651436 - 310 150395824 - Smed_0600 - LysR family transcriptional regulator 597 61.23 0 651566..651841 + 91 150395825 - Smed_0601 - hypothetical protein 598 63.08 0 651880..652770 - 296 150395826 - Smed_0602 - glyoxalase/bleomycin resistance protein/dioxygenase 599 57.17 -1 653060..653554 + 164 150395827 - Smed_0603 - UspA domain-containing protein 600 63.19 0 653610..653954 + 114 150395828 - Smed_0604 - TraR/DksA family transcriptional regulator 601 61.09 0 654254..654916 + 220 150395829 - Smed_0605 - Hly-III family protein 602 60.84 0 654993..655490 - 165 150395830 - Smed_0606 - hypothetical protein 603 62.42 0 655816..658191 + 791 150395831 - Smed_0607 - putative monovalent cation/H+ antiporter subunit A 604 61.67 0 658188..658607 + 139 150395832 - Smed_0608 - putative monovalent cation/H+ antiporter subunit B 605 60.85 0 658607..658984 + 125 150395833 - Smed_0609 - putative monovalent cation/H+ antiporter subunit C 606 62.12 0 658991..660553 + 520 150395834 - Smed_0610 - putative monovalent cation/H+ antiporter subunit D 607 59.33 0 660550..661026 + 158 150395835 - Smed_0611 - putative monovalent cation/H+ antiporter subunit E 608 66.67 +1 661023..661409 + 128 150395836 - Smed_0612 - putative monovalent cation/H+ antiporter subunit F 609 60.11 0 661409..661759 + 116 150395837 - Smed_0613 - putative monovalent cation/H+ antiporter subunit G 610 59.49 0 662165..662596 + 143 150395838 - Smed_0614 - MucR family transcriptional regulator 611 57.45 -1 662694..663116 - 140 150395839 - Smed_0615 - Fe-S metabolism associated SufE 612 61.43 0 663259..663678 - 139 150395840 - Smed_0616 - hypothetical protein 613 62.93 0 664192..665769 + 525 150395841 - Smed_0617 - histidine kinase 614 64.75 +1 665741..666679 + 312 150395842 - Smed_0618 - peptidoglycan binding domain-containing protein 615 62.64 0 666750..667097 + 115 150395843 - Smed_0619 - hypothetical protein 616 62.42 0 667251..668309 - 352 150395844 - Smed_0620 - hypothetical protein 617 64.25 0 668556..669218 + 220 150395845 - Smed_0621 - SH3 type 3 domain-containing protein 618 61.39 0 669352..669654 + 100 150395846 - Smed_0622 - hypothetical protein 619 61.05 0 669828..670112 + 94 150395847 - Smed_0623 - hypothetical protein 620 60.62 0 670199..670744 - 181 150395848 - Smed_0624 - hypothetical protein 621 67.01 +1 670737..671324 - 195 150395849 - Smed_0625 - hypothetical protein 622 61.67 0 671421..673622 - 733 150395850 - Smed_0626 - 1A family penicillin-binding protein 623 59.40 0 673774..674241 + 155 150395851 - Smed_0627 - hypothetical protein 624 61.90 0 674274..674609 - 111 150395852 - Smed_0628 - hypothetical protein 625 67.06 +1 675193..675444 + 83 150395853 - Smed_0629 - putative signal peptide protein 626 58.63 -1 675487..676158 + 223 150395854 - Smed_0630 - two component transcriptional regulator 627 62.91 0 676148..677533 + 461 150395855 - Smed_0631 - integral membrane sensor signal transduction histidine kinase 628 68.90 +2 677790..678236 + 148 150395856 - Smed_0632 - putative outer-membranne lipoprotein 629 64.96 +1 678344..679513 + 389 150395857 - Smed_0633 - cytochrome C-type biogenesis transmembrane protein 630 62.47 0 679510..679962 + 150 150395858 - Smed_0634 - cytochrome c-type biogenesis protein CcmE 631 64.09 0 679959..681941 + 660 150395859 - Smed_0635 - cytochrome c-type biogenesis protein CcmF 632 63.38 0 681938..682393 + 151 150395860 - Smed_0636 - cytochrome C biogenesis protein 633 62.74 0 682614..684167 + 517 150395861 - Smed_0637 - protease Do 634 59.83 0 684311..685012 + 233 150395862 - Smed_0638 - two component transcriptional regulator 635 62.37 0 685009..686406 + 465 150395863 - Smed_0639 - integral membrane sensor signal transduction histidine kinase 636 62.85 0 686506..689463 + 985 150395864 - Smed_0640 - (glutamate--ammonia-ligase) adenylyltransferase 637 63.09 0 689473..691791 - 772 150395865 - Smed_0641 - multi-sensor signal transduction histidine kinase 638 61.88 0 692088..694742 - 884 150395866 - Smed_0642 - aminopeptidase N 639 61.24 0 695208..696146 + 312 150395867 - Smed_0643 - hypothetical protein 640 63.02 0 696167..697456 - 429 150395868 - Smed_0644 - major facilitator transporter 641 63.46 0 697723..697878 - 51 150395869 - Smed_0645 - hypothetical protein 642 67.26 +1 697916..698083 - 55 150395870 - Smed_0646 - hypothetical protein 643 63.91 0 698202..699071 - 289 150395871 - Smed_0647 - phage SPO1 DNA polymerase-related protein 644 60.78 0 699160..700449 - 429 150395872 - Smed_0648 - putative heat shock protein 645 62.88 0 700717..702381 + 554 150395873 - Smed_0649 - electron-transferring-flavoprotein dehydrogenase 646 60.66 0 702769..703767 + 332 150395874 - Smed_0650 - substrate-binding region of ABC-type glycine betaine transport system 647 56.76 -1 703967..704854 + 295 150395875 - Smed_0651 - binding-protein-dependent transport systems inner membrane component 648 62.03 0 704948..705961 - 337 150395876 - Smed_0652 - zinc-binding alcohol dehydrogenase 649 61.44 0 706062..706463 + 133 150395877 - Smed_0653 - HxlR family transcriptional regulator 650 59.12 0 706579..707505 + 308 150395878 - Smed_0654 - diacylglycerol kinase catalytic region 651 61.54 0 707521..709002 - 493 150395879 - Smed_0655 - glycosyl transferase family protein 652 61.31 0 708995..709984 - 329 150395880 - Smed_0656 - glycosyl transferase family protein 653 63.30 0 710109..711059 + 316 150395881 - Smed_0657 - hypothetical protein 654 60.94 0 711165..712667 - 500 150395882 - Smed_0658 - AMP nucleosidase 655 64.17 0 712795..713115 - 106 150395883 - Smed_0659 - hypothetical protein 656 60.34 0 713190..713363 - 57 150395884 - Smed_0660 - hypothetical protein 657 58.05 -1 713377..713550 - 57 150395885 - Smed_0661 - hypothetical protein 658 59.40 0 713791..714492 + 233 150395886 - Smed_0662 - glutathione S-transferase domain-containing protein 659 62.87 0 714583..714924 - 113 150395887 - Smed_0663 - hypothetical protein 660 64.04 0 715521..715787 + 88 150395888 - Smed_0664 - Sel1 domain-containing protein 661 61.14 0 715869..716990 - 373 150395889 - Smed_0665 - histidinol-phosphate aminotransferase 662 54.13 -2 717375..717677 + 100 150395890 - Smed_0666 - hypothetical protein 663 55.31 -2 717880..718548 + 222 150395891 - Smed_0667 - hypothetical protein 664 60.21 0 719074..720111 + 345 150395892 - Smed_0668 - porin 665 57.27 -1 720394..721425 - 343 150395893 - Smed_0669 - phage integrase family protein 666 59.87 0 721501..722559 - 352 150395894 - Smed_0670 - porin 667 61.81 0 722770..723243 - 157 150395895 - Smed_0671 - BA14K family protein 668 64.33 0 723414..725471 - 685 150395896 - Smed_0672 - lytic transglycosylase catalytic 669 60.23 0 725763..726647 + 294 150395897 - Smed_0673 - dihydrodipicolinate synthase 670 60.00 0 726647..727126 + 159 150395898 smpB Smed_0674 - SsrA-binding protein 671 59.11 0 727344..727925 - 193 150395899 - Smed_0675 - hypothetical protein 672 62.25 0 728394..728801 + 135 150395900 - Smed_0676 - DNA-directed RNA polymerase subunit omega 673 60.65 0 728903..731128 + 741 150395901 - Smed_0677 - (p)ppGpp synthetase I, SpoT/RelA 674 52.94 -2 731343..731495 + 50 150395902 - Smed_0678 - hypothetical protein 675 61.77 0 731621..732253 + 210 150395903 - Smed_0679 - hypothetical protein 676 62.38 0 732250..732669 + 139 150395904 acpS Smed_0680 - 4'-phosphopantetheinyl transferase 677 58.20 -1 732830..733573 + 247 150395905 - Smed_0681 - signal peptidase I 678 60.95 0 733573..734289 + 238 150395906 - Smed_0682 - ribonuclease III 679 61.63 0 734298..735230 + 310 150395907 era Smed_0683 - GTP-binding protein Era 61.69 MEAN 2.82 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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