version 1.0
Sinorhizobium medicae WSM419, complete genome - 1..3781904 3529 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3430 64.75 +1 3680704..3681225 + 173 150398658 - Smed_3472 - GCN5-related N-acetyltransferase 3431 60.72 0 3681302..3681940 - 212 150398659 - Smed_3473 - exopolysaccharide synthesis ExoD 3432 58.67 -1 3681953..3682102 - 49 150398660 - Smed_3474 - hypothetical protein 3433 66.22 +1 3682204..3682869 + 221 150398661 - Smed_3475 - OmpA/MotB domain-containing protein 3434 65.91 +1 3683187..3684239 - 350 150398662 - Smed_3476 - lysine 2,3-aminomutase YodO family protein 3435 65.53 +1 3684236..3685288 - 350 150398663 - Smed_3477 - lysine--tRNA ligase 3436 62.98 0 3685448..3686017 + 189 150398664 - Smed_3478 - elongation factor P 3437 60.47 0 3686169..3687410 + 413 150398665 - Smed_3479 - cyclopropane-fatty-acyl-phospholipid synthase 3438 62.50 0 3687495..3688478 + 327 150398666 - Smed_3480 - rubrerythrin 3439 62.16 0 3688834..3689454 - 206 150398667 - Smed_3481 - transglutaminase family protein cysteine peptidase BTLCP 3440 62.64 0 3689739..3690557 - 272 150398668 - Smed_3482 - hypothetical protein 3441 56.64 -1 3690912..3691310 + 132 150398669 infC Smed_3483 - translation initiation factor IF-3 3442 54.90 -2 3691607..3691810 + 67 150398670 rpmI Smed_3484 - 50S ribosomal protein L35 3443 60.00 0 3691847..3692251 + 134 150398671 rplT Smed_3485 - 50S ribosomal protein L20 3444 62.23 0 3692417..3693499 + 360 150398672 pheS Smed_3486 - phenylalanyl-tRNA synthetase subunit alpha 3445 64.48 0 3693533..3695959 + 808 150398673 pheT Smed_3487 - phenylalanyl-tRNA synthetase subunit beta 3446 61.39 0 3696215..3696574 - 119 150398674 - Smed_3488 - hypothetical protein 3447 62.95 0 3696726..3697721 - 331 150398675 - Smed_3489 - aldo/keto reductase 3448 64.76 +1 3697899..3698789 + 296 150398676 - Smed_3490 - LysR family transcriptional regulator 3449 59.35 0 3698834..3699325 - 163 150398677 - Smed_3491 - hypothetical protein 3450 65.89 +1 3699548..3700318 + 256 150398678 - Smed_3492 - short chain dehydrogenase 3451 61.59 0 3700352..3700981 + 209 150398679 - Smed_3493 - hypothetical protein 3452 61.41 0 3700997..3701947 - 316 150398680 - Smed_3494 - aldo/keto reductase 3453 60.69 0 3702162..3703148 + 328 150398681 - Smed_3495 - oxidoreductase domain-containing protein 3454 62.99 0 3703194..3703655 - 153 150398682 - Smed_3496 - hypothetical protein 3455 63.38 0 3703732..3704523 + 263 150398683 - Smed_3497 - XRE family transcriptional regulator 3456 67.24 +1 3704633..3706213 + 526 150398684 xseA Smed_3498 - exodeoxyribonuclease VII large subunit 3457 61.59 0 3706213..3706803 + 196 150398685 - Smed_3499 - NAD(P)H dehydrogenase (quinone) 3458 64.85 +1 3706813..3707307 - 164 150398686 - Smed_3500 - MarR family transcriptional regulator 3459 66.10 +1 3707421..3708296 + 291 150398687 - Smed_3501 - hypothetical protein 3460 64.10 0 3708455..3709117 + 220 150398688 - Smed_3502 - ECF subfamily RNA polymerase sigma-24 factor 3461 58.90 0 3709107..3709505 + 132 150398689 - Smed_3503 - glyoxalase/bleomycin resistance protein/dioxygenase 3462 63.80 0 3709638..3710894 - 418 150398690 - Smed_3504 - peptidase M29 aminopeptidase II 3463 62.46 0 3710966..3711655 - 229 150398691 - Smed_3505 - glutathione S-transferase domain-containing protein 3464 61.76 0 3711677..3712186 + 169 150398692 - Smed_3506 - MarR family transcriptional regulator 3465 64.35 0 3712206..3712679 - 157 150398693 - Smed_3507 - ybaK/ebsC protein 3466 61.54 0 3712683..3713033 - 116 150398694 - Smed_3508 - arsenate reductase and related 3467 66.75 +1 3713117..3714286 - 389 150398695 - Smed_3509 - aromatic amino acid aminotransferase 3468 65.25 +1 3714384..3715445 - 353 150398696 - Smed_3510 - succinylglutamate desuccinylase/aspartoacylase 3469 60.19 0 3716016..3716432 - 138 150398697 - Smed_3511 - glutathione-dependent formaldehyde-activating GFA 3470 60.22 0 3716480..3716944 - 154 150398698 - Smed_3512 - activator of Hsp90 ATPase 1 family protein 3471 60.00 0 3716941..3717270 - 109 150398699 - Smed_3513 - regulatory protein ArsR 3472 61.69 0 3717420..3718565 + 381 150398700 - Smed_3514 - FMN-dependent alpha-hydroxy acid dehydrogenase 3473 63.85 0 3719416..3720978 - 520 150398701 guaA Smed_3517 - bifunctional GMP synthase/glutamine amidotransferase protein 3474 64.79 +1 3721085..3721723 - 212 150398702 - Smed_3518 - 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 3475 62.94 0 3721720..3722229 - 169 150398703 - Smed_3519 - thioesterase superfamily protein 3476 61.05 0 3722251..3722784 - 177 150398704 - Smed_3520 - TspO and MBR like protein 3477 62.48 0 3722866..3723414 + 182 150398705 - Smed_3521 - GCN5-related N-acetyltransferase 3478 62.96 0 3723366..3724499 - 377 150398706 - Smed_3522 - hypothetical protein 3479 63.87 0 3725274..3726920 + 548 150398707 - Smed_3523 - polypeptide-transport-associated domain-containing protein 3480 67.22 +1 3727030..3728475 + 481 150398708 - Smed_3524 - filamentous haemagglutinin outer membrane protein 3481 62.68 0 3728785..3733803 + 1672 150398709 - Smed_3525 - alpha beta-propellor repeat-containing integrin 3482 60.59 0 3733954..3734562 + 202 150398710 - Smed_3526 - invasion associated locus B family protein 3483 63.23 0 3734626..3735759 - 377 150398711 - Smed_3527 - putative signal peptide protein 3484 65.89 +1 3735759..3737312 - 517 150398712 - Smed_3528 - hypothetical protein 3485 62.45 0 3737358..3738638 - 426 150398713 - Smed_3529 - putative iron-regulated protein 3486 63.72 0 3738783..3740072 - 429 150398714 - Smed_3530 - Fmu (Sun) domain-containing protein 3487 61.07 0 3740205..3740579 - 124 150398715 - Smed_3531 - rare lipoprotein A 3488 47.70 -2 3740764..3740937 - 57 150398716 - Smed_3532 - hypothetical protein 3489 64.16 0 3741041..3741916 - 291 150398717 - Smed_3533 - NAD-dependent epimerase/dehydratase 3490 63.23 0 3741913..3743076 - 387 150398718 - Smed_3534 - hypothetical protein 3491 62.48 0 3743087..3743779 - 230 150398719 - Smed_3535 - glutathione S-transferase domain-containing protein 3492 61.96 0 3743936..3744742 + 268 150398720 - Smed_3536 - undecaprenyl pyrophosphate phosphatase 3493 61.11 0 3744854..3745015 - 53 150398721 - Smed_3537 - putative signal peptide protein 3494 62.39 0 3745261..3746241 - 326 150398722 - Smed_3538 - NADH dehydrogenase (ubiquinone) 3495 62.85 0 3746362..3746649 - 95 150398723 - Smed_3539 - hypothetical protein 3496 64.23 0 3746754..3747452 - 232 150398724 - Smed_3540 - orotidine 5'-phosphate decarboxylase 3497 64.67 +1 3747460..3748059 - 199 150398725 - Smed_3541 - phosphoglycerate mutase 3498 58.87 0 3748056..3748658 - 200 150398726 - Smed_3542 - hypothetical protein 3499 61.57 0 3748860..3749978 - 372 150398727 - Smed_3543 - DNA polymerase III subunit beta 3500 66.56 +1 3750240..3751202 + 320 150398728 - Smed_3544 - uroporphyrin-III C/tetrapyrrole methyltransferase 3501 62.60 0 3751192..3751560 + 122 150398729 - Smed_3545 - hypothetical protein 3502 62.87 0 3751749..3752696 + 315 150398730 - Smed_3546 - glutathione synthetase 3503 67.79 +2 3752813..3754411 + 532 150398731 - Smed_3547 - Mg chelatase, subunit ChlI 3504 59.73 0 3754428..3754802 + 124 150398732 - Smed_3548 - SH3 domain-containing protein 3505 62.54 0 3755212..3756180 - 322 150398733 - Smed_3549 - cysteine synthase A 3506 62.40 0 3757096..3757728 + 210 150398734 - Smed_3551 - lysine exporter protein LysE/YggA 3507 61.83 0 3757797..3758705 - 302 150398735 - Smed_3552 - hypothetical protein 3508 60.96 0 3758839..3759276 + 145 150398736 - Smed_3553 - AsnC family transcriptional regulator 3509 66.25 +1 3759269..3759751 - 160 150398737 dut Smed_3554 - deoxyuridine 5'-triphosphate nucleotidohydrolase 3510 63.19 0 3759850..3761433 + 527 150398738 - Smed_3555 - peptide chain release factor 3 3511 63.54 0 3761452..3762315 - 287 150398739 - Smed_3556 - hypothetical protein 3512 63.70 0 3762428..3763237 - 269 150398740 - Smed_3557 - AraC family transcriptional regulator 3513 61.98 0 3763359..3763763 - 134 150398741 - Smed_3558 - glutathione-dependent formaldehyde-activating GFA 3514 63.24 0 3764046..3764921 - 291 150398742 - Smed_3559 - myo-inositol catabolism IolB domain-containing protein 3515 60.13 0 3765010..3765912 - 300 150398743 - Smed_3560 - xylose isomerase domain-containing protein 3516 64.85 +1 3765994..3767862 - 622 150398744 - Smed_3561 - thiamine pyrophosphate protein central region 3517 62.35 0 3767908..3769875 - 655 150398745 - Smed_3562 - ribokinase-like domain-containing protein 3518 61.52 0 3769994..3770848 - 284 150398746 - Smed_3563 - RpiR family transcriptional regulator 3519 63.66 0 3770980..3772110 - 376 150398747 - Smed_3564 - oxidoreductase domain-containing protein 3520 64.00 0 3772354..3773178 + 274 150398748 - Smed_3565 - hypothetical protein 3521 66.09 +1 3773197..3774420 - 407 150398749 - Smed_3566 - bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 3522 62.09 0 3774565..3775023 + 152 150398750 - Smed_3567 - BadM/Rrf2 family transcriptional regulator 3523 64.13 0 3775013..3775918 + 301 150398751 - Smed_3568 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase 3524 64.18 0 3775971..3776654 - 227 150398752 - Smed_3569 - ankyrin 3525 66.67 +1 3776678..3777457 - 259 150398753 - Smed_3570 - short-chain dehydrogenase/reductase SDR 3526 64.70 +1 3777541..3779115 - 524 150398754 - Smed_3571 - 2-polyprenylphenol 6-hydroxylase 3527 61.90 0 3779120..3779896 - 258 150398755 ubiE Smed_3572 - ubiquinone/menaquinone biosynthesis methyltransferase 3528 64.17 0 3780080..3781000 + 306 150398756 - Smed_3573 - formamidopyrimidine-DNA glycosylase 3529 65.76 +1 3781073..3781846 + 257 150398757 - Smed_3574 - enoyl-CoA hydratase 61.69 MEAN 2.82 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0