version 1.0
Sinorhizobium medicae WSM419, complete genome - 1..3781904 3529 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3345 58.86 -1 3587713..3588660 + 315 150398573 - Smed_3384 - hypothetical protein 3346 59.96 0 3588712..3589203 - 163 150398574 - Smed_3385 - putative signal peptide protein 3347 63.06 0 3589318..3590205 - 295 150398575 - Smed_3386 - hypothetical protein 3348 65.51 +1 3590494..3590925 - 143 150398576 - Smed_3387 - pyrimidine dimer DNA glycosylase 3349 65.25 +1 3591205..3593457 + 750 150398577 - Smed_3388 - 1A family penicillin-binding protein 3350 60.38 0 3593690..3595615 + 641 150398578 - Smed_3389 - molecular chaperone DnaK 3351 62.59 0 3595879..3597006 + 375 150398579 - Smed_3390 - chaperone protein DnaJ 3352 63.21 0 3597180..3598046 - 288 150398580 - Smed_3391 - hypothetical protein 3353 62.74 0 3598050..3598685 - 211 150398581 - Smed_3392 - hypothetical protein 3354 61.79 0 3598801..3599805 - 334 150398582 - Smed_3393 - phosphate transporter 3355 61.09 0 3599805..3600449 - 214 150398583 - Smed_3394 - hypothetical protein 3356 66.34 +1 3600571..3601800 + 409 150398584 recF Smed_3395 - recombination protein F 3357 66.28 +1 3601840..3602616 + 258 150398585 - Smed_3396 - molybdopterin biosynthesis protein MoeB 3358 63.83 0 3602662..3603330 - 222 150398586 - Smed_3397 - TetR family transcriptional regulator 3359 63.36 0 3603392..3606538 - 1048 150398587 - Smed_3398 - hydrophobe/amphiphile efflux-1 (HAE1) family protein 3360 63.64 0 3606549..3607769 - 406 150398588 - Smed_3399 - RND family efflux transporter MFP subunit 3361 62.22 0 3608140..3609150 - 336 150398589 - Smed_3400 - ABC transporter related 3362 62.44 0 3609167..3610231 - 354 150398590 - Smed_3401 - oxidoreductase domain-containing protein 3363 61.19 0 3610228..3611067 - 279 150398591 - Smed_3402 - binding-protein-dependent transport systems inner membrane component 3364 60.23 0 3611080..3612027 - 315 150398592 - Smed_3403 - binding-protein-dependent transport systems inner membrane component 3365 67.69 +2 3612045..3612239 - 64 150398593 - Smed_3404 - hypothetical protein 3366 59.84 0 3612265..3613524 - 419 150398594 - Smed_3405 - extracellular solute-binding protein 3367 65.55 +1 3613582..3614478 - 298 150398595 murQ Smed_3406 - N-acetylmuramic acid-6-phosphate etherase 3368 64.75 +1 3614676..3615560 + 294 150398596 - Smed_3407 - ATPase BadF/BadG/BcrA/BcrD type 3369 64.18 0 3615557..3616321 + 254 150398597 - Smed_3408 - GntR family transcriptional regulator 3370 66.28 +1 3616361..3617386 + 341 150398598 - Smed_3409 - glutamine--fructose-6-phosphate transaminase (isomerizing) 3371 65.55 +1 3617383..3618543 + 386 150398599 - Smed_3410 - N-acetylglucosamine-6-phosphate deacetylase 3372 67.89 +2 3618646..3619383 - 245 150398600 - Smed_3411 - CutC family protein 3373 66.12 +1 3619380..3620291 - 303 150398601 - Smed_3412 - ROK family protein 3374 66.45 +1 3620288..3621649 - 453 150398602 - Smed_3413 - hypothetical protein 3375 62.55 0 3621988..3622740 + 250 150398603 - Smed_3414 - CysZ-like protein 3376 61.43 0 3622949..3623158 + 69 150398604 - Smed_3415 - hypothetical protein 3377 60.02 0 3623232..3624224 - 330 150398605 - Smed_3416 - basic membrane lipoprotein 3378 61.77 0 3624476..3625129 - 217 150398606 - Smed_3417 - methionine sulfoxide reductase A 3379 63.84 0 3625188..3625505 - 105 150398607 - Smed_3418 - putative signal peptide protein 3380 67.43 +2 3627958..3628872 + 304 150398608 - Smed_3422 - LysR family transcriptional regulator 3381 58.06 -1 3628907..3629266 - 119 150398609 - Smed_3423 - transport-associated 3382 64.34 0 3629371..3630315 + 314 150398610 - Smed_3424 - auxin efflux carrier 3383 63.48 0 3630346..3631443 - 365 150398611 - Smed_3425 - branched-chain amino acid aminotransferase 3384 66.04 +1 3631742..3632533 - 263 150398612 - Smed_3426 - cytochrome c class I 3385 64.94 +1 3632689..3633441 + 250 150398613 - Smed_3427 - 3-deoxy-manno-octulosonate cytidylyltransferase 3386 61.52 0 3633467..3634321 + 284 150398614 - Smed_3428 - prephenate dehydratase 3387 57.25 -1 3634672..3634809 + 45 150398615 - Smed_3429 - hypothetical protein 3388 64.83 +1 3634952..3635932 - 326 150398616 - Smed_3430 - NUDIX hydrolase 3389 62.72 0 3635935..3636339 - 134 150398617 - Smed_3431 - histidine triad (HIT) protein 3390 64.91 +1 3636635..3638512 + 625 150398618 - Smed_3432 - DNA polymerase III subunits gamma and tau 3391 59.57 0 3638629..3638952 + 107 150398619 - Smed_3433 - hypothetical protein 3392 64.71 +1 3639042..3639653 + 203 150398620 - Smed_3434 - lysine exporter protein LysE/YggA 3393 65.02 +1 3639751..3640356 + 201 150398621 recR Smed_3435 - recombination protein RecR 3394 64.57 +1 3640392..3641630 + 412 150398622 - Smed_3436 - lytic murein transglycosylase 3395 64.37 0 3641836..3643491 - 551 150398623 - Smed_3437 - protein of unknown function DUF894 DitE 3396 61.17 0 3643702..3644319 + 205 150398624 - Smed_3438 - hypothetical protein 3397 61.18 0 3644337..3645995 + 552 150398625 nusA Smed_3439 - transcription elongation factor NusA 3398 63.07 0 3646001..3646723 + 240 150398626 - Smed_3440 - hypothetical protein 3399 65.46 +1 3646829..3649486 + 885 150398627 infB Smed_3441 - translation initiation factor IF-2 3400 61.48 0 3649659..3650063 + 134 150398628 rbfA Smed_3442 - ribosome-binding factor A 3401 63.02 0 3650075..3651007 + 310 150398629 truB Smed_3443 - tRNA pseudouridine synthase B 3402 62.48 0 3651152..3652870 + 572 150398630 - Smed_3444 - signal transduction histidine kinase 3403 57.78 -1 3653110..3653379 + 89 150398631 rpsO Smed_3445 - 30S ribosomal protein S15 3404 61.82 0 3653754..3655898 + 714 150398632 - Smed_3446 - polynucleotide phosphorylase/polyadenylase 3405 64.01 0 3656090..3657106 + 338 150398633 - Smed_3447 - methyltransferase small 3406 63.57 0 3657262..3658068 - 268 150398634 - Smed_3448 - enoyl-(acyl carrier protein) reductase 3407 62.08 0 3658073..3659293 - 406 150398635 - Smed_3449 - 3-oxoacyl-(acyl carrier protein) synthase I 3408 62.02 0 3659342..3659857 - 171 150398636 - Smed_3450 - 3-hydroxydecanoyl-(acyl carrier protein) dehydratase 3409 59.34 0 3660338..3660760 + 140 150398637 - Smed_3451 - ferric uptake regulator family protein 3410 65.09 +1 3660796..3661431 - 211 150398638 - Smed_3452 - hypothetical protein 3411 64.01 0 3661523..3662311 - 262 150398639 - Smed_3453 - hypothetical protein 3412 59.72 0 3662448..3662591 + 47 150398640 - Smed_3454 - hypothetical protein 3413 58.72 -1 3662981..3663370 - 129 150398641 - Smed_3455 - hypothetical protein 3414 64.77 +1 3663656..3665026 + 456 150398642 - Smed_3456 - 3-phosphoshikimate 1-carboxyvinyltransferase 3415 64.79 +1 3665023..3665661 + 212 150398643 cmk Smed_3457 - cytidylate kinase 3416 60.75 0 3665828..3667534 + 568 150398644 rpsA Smed_3458 - 30S ribosomal protein S1 3417 67.43 +2 3667656..3669221 - 521 150398645 - Smed_3459 - hypothetical protein 3418 63.66 0 3669365..3669697 + 110 150398646 - Smed_3460 - hypothetical protein 3419 61.61 0 3669757..3670290 - 177 150398647 - Smed_3461 - hypothetical protein 3420 63.65 0 3670822..3672777 - 651 150398648 - Smed_3462 - putative adenylate/guanylate cyclase 3421 63.03 0 3672959..3673288 - 109 150398649 - Smed_3463 - hypothetical protein 3422 61.72 0 3673498..3674124 + 208 150398650 - Smed_3464 - 3'-5' exonuclease 3423 62.77 0 3674164..3674445 - 93 150398651 - Smed_3465 - putative selenoprotein 3424 64.46 0 3674651..3675103 + 150 150398652 - Smed_3466 - DoxX family protein 3425 62.01 0 3675192..3675599 - 135 150398653 - Smed_3467 - nucleoside diphosphate kinase regulator 3426 65.24 +1 3675974..3676465 + 163 150398654 - Smed_3468 - glutathione-dependent formaldehyde-activating GFA 3427 59.80 0 3676782..3678617 - 611 150398655 - Smed_3469 - GTP-binding protein LepA 3428 64.53 +1 3678667..3679932 - 421 150398656 - Smed_3470 - major facilitator transporter 3429 63.97 0 3680109..3680702 + 197 150398657 - Smed_3471 - XRE family transcriptional regulator 3430 64.75 +1 3680704..3681225 + 173 150398658 - Smed_3472 - GCN5-related N-acetyltransferase 3431 60.72 0 3681302..3681940 - 212 150398659 - Smed_3473 - exopolysaccharide synthesis ExoD 3432 58.67 -1 3681953..3682102 - 49 150398660 - Smed_3474 - hypothetical protein 3433 66.22 +1 3682204..3682869 + 221 150398661 - Smed_3475 - OmpA/MotB domain-containing protein 3434 65.91 +1 3683187..3684239 - 350 150398662 - Smed_3476 - lysine 2,3-aminomutase YodO family protein 3435 65.53 +1 3684236..3685288 - 350 150398663 - Smed_3477 - lysine--tRNA ligase 3436 62.98 0 3685448..3686017 + 189 150398664 - Smed_3478 - elongation factor P 3437 60.47 0 3686169..3687410 + 413 150398665 - Smed_3479 - cyclopropane-fatty-acyl-phospholipid synthase 3438 62.50 0 3687495..3688478 + 327 150398666 - Smed_3480 - rubrerythrin 3439 62.16 0 3688834..3689454 - 206 150398667 - Smed_3481 - transglutaminase family protein cysteine peptidase BTLCP 3440 62.64 0 3689739..3690557 - 272 150398668 - Smed_3482 - hypothetical protein 3441 56.64 -1 3690912..3691310 + 132 150398669 infC Smed_3483 - translation initiation factor IF-3 3442 54.90 -2 3691607..3691810 + 67 150398670 rpmI Smed_3484 - 50S ribosomal protein L35 3443 60.00 0 3691847..3692251 + 134 150398671 rplT Smed_3485 - 50S ribosomal protein L20 3444 62.23 0 3692417..3693499 + 360 150398672 pheS Smed_3486 - phenylalanyl-tRNA synthetase subunit alpha 61.69 MEAN 2.82 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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