version 1.0
Sinorhizobium medicae WSM419, complete genome - 1..3781904 3529 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3260 59.26 0 3490825..3490986 - 53 150398488 - Smed_3298 - hypothetical protein 3261 58.85 -1 3491066..3491449 - 127 150398489 - Smed_3299 - hypothetical protein 3262 57.55 -1 3491458..3491775 - 105 150398490 - Smed_3300 - hypothetical protein 3263 61.84 0 3492107..3492811 + 234 150398491 - Smed_3301 - XRE family transcriptional regulator 3264 63.71 0 3492854..3493834 - 326 150398492 - Smed_3302 - oligopeptide/dipeptide ABC transporter, ATPase subunit 3265 61.71 0 3493831..3494859 - 342 150398493 - Smed_3303 - oligopeptide/dipeptide ABC transporter, ATPase subunit 3266 60.98 0 3494864..3495865 - 333 150398494 - Smed_3304 - binding-protein-dependent transport systems inner membrane component 3267 62.88 0 3495875..3496720 - 281 150398495 - Smed_3305 - binding-protein-dependent transport systems inner membrane component 3268 62.51 0 3496870..3498555 - 561 150398496 - Smed_3306 - 5-oxoprolinase (ATP-hydrolyzing) 3269 63.11 0 3498596..3500617 - 673 150398497 - Smed_3307 - 5-oxoprolinase (ATP-hydrolyzing) 3270 58.92 0 3500639..3502225 - 528 150398498 - Smed_3308 - extracellular solute-binding protein 3271 58.73 -1 3502836..3503465 + 209 150398499 - Smed_3309 - XRE family transcriptional regulator 3272 60.23 0 3503641..3504525 + 294 150398500 purU Smed_3310 - formyltetrahydrofolate deformylase 3273 59.79 0 3504719..3505852 + 377 150398501 - Smed_3311 - glycine cleavage T protein (aminomethyl transferase) 3274 63.04 0 3505864..3506469 + 201 150398502 - Smed_3312 - hypothetical protein 3275 61.80 0 3506466..3507431 + 321 150398503 - Smed_3313 - ferredoxin 3276 59.17 0 3507542..3508582 + 346 150398504 - Smed_3314 - hypothetical protein 3277 57.77 -1 3508630..3509967 + 445 150398505 - Smed_3315 - flavin-containing monooxygenase FMO 3278 62.15 0 3510085..3512454 - 789 150398506 - Smed_3316 - glycine cleavage T protein (aminomethyl transferase) 3279 62.46 0 3512684..3514468 + 594 150398507 - Smed_3317 - amino acid permease-associated region 3280 62.98 0 3516048..3516833 - 261 150398508 - Smed_3319 - NAD-dependent epimerase/dehydratase 3281 63.65 0 3516894..3518618 - 574 150398509 - Smed_3320 - dihydroxy-acid dehydratase 3282 63.07 0 3518696..3519418 + 240 150398510 - Smed_3321 - GntR domain-containing protein 3283 65.99 +1 3519651..3520535 + 294 150398511 - Smed_3322 - SMP-30/gluconolaconase/LRE domain-containing protein 3284 62.46 0 3520556..3521197 - 213 150398512 - Smed_3323 - glutathione S-transferase domain-containing protein 3285 61.94 0 3521222..3522301 - 359 150398513 - Smed_3324 - ABC transporter related 3286 61.36 0 3522324..3523397 - 357 150398514 - Smed_3325 - oxidoreductase domain-containing protein 3287 64.60 +1 3523399..3524415 - 338 150398515 - Smed_3326 - oxidoreductase domain-containing protein 3288 62.05 0 3524435..3525322 - 295 150398516 - Smed_3327 - binding-protein-dependent transport systems inner membrane component 3289 61.86 0 3525315..3526271 - 318 150398517 - Smed_3328 - binding-protein-dependent transport systems inner membrane component 3290 64.57 +1 3526276..3527562 - 428 150398518 - Smed_3329 - extracellular solute-binding protein 3291 60.77 0 3527751..3528428 + 225 150398519 - Smed_3330 - TetR family transcriptional regulator 3292 62.32 0 3528552..3529700 + 382 150398520 - Smed_3331 - oxidoreductase domain-containing protein 3293 64.52 +1 3529704..3530867 + 387 150398521 - Smed_3332 - hypothetical protein 3294 63.36 0 3530877..3532298 + 473 150398522 - Smed_3333 - hypothetical protein 3295 65.83 +1 3532318..3533151 + 277 150398523 - Smed_3334 - xylose isomerase domain-containing protein 3296 61.09 0 3533307..3534596 + 429 150398524 - Smed_3335 - oxidoreductase domain-containing protein 3297 66.13 +1 3534676..3536910 + 744 150398525 - Smed_3336 - heavy metal translocating P-type ATPase 3298 62.30 0 3537182..3538717 + 511 150398526 - Smed_3337 - ABC transporter related 3299 61.99 0 3538714..3539847 + 377 150398527 - Smed_3338 - inner-membrane translocator 3300 63.48 0 3539850..3540821 + 323 150398528 - Smed_3339 - inner-membrane translocator 3301 63.18 0 3540825..3541283 + 152 150398529 - Smed_3340 - cytidine deaminase 3302 65.04 +1 3541280..3542077 + 265 150398530 - Smed_3341 - purine nucleoside phosphorylase 3303 66.89 +1 3542078..3543394 + 438 150398531 deoA Smed_3342 - thymidine phosphorylase 3304 60.95 0 3543425..3544054 - 209 150398532 upp Smed_3343 - uracil phosphoribosyltransferase 3305 64.21 0 3544217..3545191 - 324 150398533 - Smed_3344 - adenosine deaminase 3306 65.68 +1 3545188..3546408 - 406 150398534 - Smed_3345 - phosphopentomutase 3307 61.88 0 3546580..3547164 - 194 150398535 - Smed_3346 - hypothetical protein 3308 61.95 0 3547172..3547786 - 204 150398536 - Smed_3347 - TadE family protein 3309 61.70 0 3547955..3548377 - 140 150398537 - Smed_3348 - hypothetical protein 3310 57.53 -1 3548629..3548814 + 61 150398538 - Smed_3349 - Flp/Fap pilin component 3311 54.97 -2 3548902..3549414 + 170 150398539 - Smed_3350 - peptidase A24A prepilin type IV 3312 64.69 +1 3549564..3550373 + 269 150398540 - Smed_3351 - SAF domain-containing protein 3313 62.98 0 3550348..3551922 + 524 150398541 - Smed_3352 - type II and III secretion system protein 3314 65.16 +1 3551931..3552659 + 242 150398542 - Smed_3353 - pilus biogenesis lipoprotein CpaD 3315 63.71 0 3552684..3553970 + 428 150398543 - Smed_3354 - response regulator receiver protein 3316 63.46 0 3554032..3555498 + 488 150398544 - Smed_3355 - type II secretion system protein E 3317 60.93 0 3555560..3556570 + 336 150398545 - Smed_3356 - type II secretion system protein 3318 61.89 0 3556584..3557567 + 327 150398546 - Smed_3357 - type II secretion system protein 3319 67.03 +1 3557846..3558661 - 271 150398547 - Smed_3358 - tetratricopeptide TPR_4 3320 64.16 0 3558798..3560195 + 465 150398548 - Smed_3359 - leucyl aminopeptidase 3321 60.00 0 3560268..3560612 + 114 150398549 - Smed_3360 - MarR family transcriptional regulator 3322 65.17 +1 3560609..3561475 + 288 150398550 - Smed_3361 - NLP/P60 protein 3323 64.06 0 3561585..3562544 - 319 150398551 - Smed_3362 - D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding 3324 63.54 0 3562556..3564184 - 542 150398552 - Smed_3363 - ABC transporter related 3325 62.07 0 3564193..3565323 - 376 150398553 - Smed_3364 - binding-protein-dependent transport systems inner membrane component 3326 58.45 -1 3565323..3566405 - 360 150398554 - Smed_3365 - binding-protein-dependent transport systems inner membrane component 3327 58.60 -1 3566586..3568445 - 619 150398555 - Smed_3366 - extracellular solute-binding protein 3328 65.17 +1 3568690..3569757 + 355 150398556 mepA Smed_3367 - penicillin-insensitive murein endopeptidase 3329 61.42 0 3570002..3570382 + 126 150398557 mgsA Smed_3368 - methylglyoxal synthase 3330 64.51 0 3570692..3571711 + 339 150398558 glk Smed_3369 - glucokinase 3331 63.62 0 3571820..3573625 + 601 150398559 - Smed_3370 - ABC transporter related 3332 66.54 +1 3573660..3574478 + 272 150398560 - Smed_3371 - dihydrodipicolinate reductase 3333 62.89 0 3574506..3575141 + 211 150398561 - Smed_3372 - phosphoglyceromutase 3334 64.15 0 3575288..3576160 - 290 150398562 - Smed_3373 - methylated-DNA--protein-cysteine methyltransferase 3335 60.64 0 3576240..3576737 - 165 150398563 - Smed_3374 - hypothetical protein 3336 64.28 0 3576850..3577560 + 236 150398564 - Smed_3375 - endonuclease III 3337 65.82 +1 3577621..3578214 - 197 150398565 - Smed_3376 - TetR family transcriptional regulator 3338 58.22 -1 3578283..3578708 + 141 150398566 - Smed_3377 - glyoxalase/bleomycin resistance protein/dioxygenase 3339 62.94 0 3578835..3579827 + 330 150398567 - Smed_3378 - ribokinase-like domain-containing protein 3340 64.31 0 3579975..3580526 - 183 150398568 - Smed_3379 - hypothetical protein 3341 63.04 0 3580661..3581734 + 357 150398569 - Smed_3380 - glyoxylate reductase 3342 62.45 0 3581962..3584976 - 1004 150398570 - Smed_3381 - DNA polymerase I 3343 61.04 0 3585430..3585873 + 147 150398571 - Smed_3382 - MarR family transcriptional regulator 3344 63.36 0 3585956..3587347 + 463 150398572 - Smed_3383 - hypothetical protein 3345 58.86 -1 3587713..3588660 + 315 150398573 - Smed_3384 - hypothetical protein 3346 59.96 0 3588712..3589203 - 163 150398574 - Smed_3385 - putative signal peptide protein 3347 63.06 0 3589318..3590205 - 295 150398575 - Smed_3386 - hypothetical protein 3348 65.51 +1 3590494..3590925 - 143 150398576 - Smed_3387 - pyrimidine dimer DNA glycosylase 3349 65.25 +1 3591205..3593457 + 750 150398577 - Smed_3388 - 1A family penicillin-binding protein 3350 60.38 0 3593690..3595615 + 641 150398578 - Smed_3389 - molecular chaperone DnaK 3351 62.59 0 3595879..3597006 + 375 150398579 - Smed_3390 - chaperone protein DnaJ 3352 63.21 0 3597180..3598046 - 288 150398580 - Smed_3391 - hypothetical protein 3353 62.74 0 3598050..3598685 - 211 150398581 - Smed_3392 - hypothetical protein 3354 61.79 0 3598801..3599805 - 334 150398582 - Smed_3393 - phosphate transporter 3355 61.09 0 3599805..3600449 - 214 150398583 - Smed_3394 - hypothetical protein 3356 66.34 +1 3600571..3601800 + 409 150398584 recF Smed_3395 - recombination protein F 3357 66.28 +1 3601840..3602616 + 258 150398585 - Smed_3396 - molybdopterin biosynthesis protein MoeB 3358 63.83 0 3602662..3603330 - 222 150398586 - Smed_3397 - TetR family transcriptional regulator 3359 63.36 0 3603392..3606538 - 1048 150398587 - Smed_3398 - hydrophobe/amphiphile efflux-1 (HAE1) family protein 61.69 MEAN 2.82 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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