version 1.0
Sinorhizobium medicae WSM419, complete genome - 1..3781904 3529 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3211 61.24 0 3428654..3430054 - 466 150398439 - Smed_3247 - S-adenosyl-L-homocysteine hydrolase 3212 61.56 0 3430211..3430504 - 97 150398440 - Smed_3248 - phosphotransferase system, phosphocarrier protein HPr 3213 59.45 0 3430501..3430902 - 133 150398441 - Smed_3249 - PTS system fructose subfamily IIA component 3214 63.99 0 3431067..3431552 - 161 150398442 - Smed_3250 - HPr kinase 3215 63.27 0 3431549..3433285 - 578 150398443 - Smed_3251 - integral membrane sensor signal transduction histidine kinase 3216 61.55 0 3433476..3434198 - 240 150398444 - Smed_3252 - two component transcriptional regulator 3217 62.20 0 3434539..3436149 + 536 150398445 - Smed_3253 - phosphoenolpyruvate carboxykinase 3218 64.37 0 3436255..3436689 + 144 150398446 - Smed_3254 - hypothetical protein 3219 60.34 0 3436779..3437252 + 157 150398447 - Smed_3255 - hypothetical protein 3220 66.01 +1 3437367..3437978 + 203 150398448 - Smed_3256 - 2OG-Fe(II) oxygenase 3221 61.35 0 3438155..3439150 - 331 150398449 - Smed_3257 - pantothenate kinase 3222 59.57 0 3439147..3439470 - 107 150398450 hisE Smed_3258 - phosphoribosyl-ATP pyrophosphatase 3223 63.58 0 3439495..3440271 - 258 150398451 - Smed_3259 - imidazole glycerol phosphate synthase subunit HisF 3224 63.86 0 3440268..3441014 - 248 150398452 - Smed_3260 - 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 3225 63.44 0 3441048..3441698 - 216 150398453 hisH Smed_3261 - imidazole glycerol phosphate synthase subunit HisH 3226 63.31 0 3441698..3442174 - 158 150398454 - Smed_3262 - hypothetical protein 3227 62.40 0 3442201..3442809 - 202 150398455 hisB Smed_3263 - imidazoleglycerol-phosphate dehydratase 3228 62.19 0 3443126..3443683 + 185 150398456 - Smed_3264 - ATP-dependent protease peptidase subunit 3229 61.85 0 3443673..3444191 + 172 150398457 - Smed_3265 - GCN5-related N-acetyltransferase 3230 62.69 0 3444191..3445498 + 435 150398458 hslU Smed_3266 - ATP-dependent protease ATP-binding subunit 3231 62.04 0 3445687..3446637 + 316 150398459 - Smed_3267 - hypothetical protein 3232 63.88 0 3446902..3448302 + 466 150398460 - Smed_3268 - cytochrome P450 3233 66.32 +1 3448396..3450399 + 667 150398461 - Smed_3269 - hydantoinase/oxoprolinase 3234 62.44 0 3450562..3452736 + 724 150398462 - Smed_3270 - malate synthase G 3235 62.07 0 3452834..3453508 - 224 150398463 - Smed_3271 - ErfK/YbiS/YcfS/YnhG family protein 3236 62.29 0 3453704..3454228 + 174 150398464 - Smed_3272 - hypothetical protein 3237 62.56 0 3454265..3454849 - 194 150398465 - Smed_3273 - two component Fis family transcriptional regulator 3238 63.75 0 3455027..3456328 - 433 150398466 - Smed_3274 - integral membrane sensor signal transduction histidine kinase 3239 66.10 +1 3456417..3458882 - 821 150398467 - Smed_3275 - ATP-dependent helicase HrpB 3240 62.72 0 3458879..3459562 - 227 150398468 - Smed_3276 - ABC transporter related 3241 64.66 +1 3459563..3461260 - 565 150398469 - Smed_3277 - putative permease ABC transporter protein 3242 60.96 0 3461244..3462470 - 408 150398470 - Smed_3278 - hypothetical protein 3243 58.96 0 3469459..3471963 - 834 150398471 - Smed_3279 - multi-sensor hybrid histidine kinase 3244 56.06 -1 3471960..3472685 - 241 150398472 - Smed_3280 - two component transcriptional regulator 3245 55.43 -2 3472941..3473972 + 343 150398473 - Smed_3281 - extracellular solute-binding protein 3246 59.54 0 3476195..3477247 + 350 150398474 - Smed_3284 - ABC transporter related 3247 60.26 0 3477266..3477499 - 77 150398475 - Smed_3285 - hypothetical protein 3248 64.42 0 3477527..3478060 - 177 150398476 - Smed_3286 - sarcosine oxidase gamma subunit 3249 63.60 0 3478053..3481016 - 987 150398477 - Smed_3287 - sarcosine oxidase alpha subunit family protein 3250 61.29 0 3481013..3481291 - 92 150398478 - Smed_3288 - sarcosine oxidase delta subunit family protein 3251 62.19 0 3481318..3482568 - 416 150398479 - Smed_3289 - sarcosine oxidase beta subunit family protein 3252 65.13 +1 3482663..3483637 + 324 150398480 - Smed_3290 - AraC family transcriptional regulator 3253 61.70 0 3483737..3484642 + 301 150398481 - Smed_3291 - glutamine amidotransferase class-II 3254 61.43 0 3484678..3485364 + 228 150398482 - Smed_3292 - glutamate synthase alpha subunit 3255 64.03 0 3485380..3486708 + 442 150398483 - Smed_3293 - ferredoxin-dependent glutamate synthase 3256 59.81 0 3486709..3488094 + 461 150398484 - Smed_3294 - glutamine synthetase catalytic region 3257 61.36 0 3488252..3488515 - 87 150398485 - Smed_3295 - hypothetical protein 3258 64.63 +1 3488550..3489287 - 245 150398486 - Smed_3296 - putative signal peptide protein 3259 62.23 0 3489413..3490810 - 465 150398487 - Smed_3297 - amino acid permease-associated region 3260 59.26 0 3490825..3490986 - 53 150398488 - Smed_3298 - hypothetical protein 3261 58.85 -1 3491066..3491449 - 127 150398489 - Smed_3299 - hypothetical protein 3262 57.55 -1 3491458..3491775 - 105 150398490 - Smed_3300 - hypothetical protein 3263 61.84 0 3492107..3492811 + 234 150398491 - Smed_3301 - XRE family transcriptional regulator 3264 63.71 0 3492854..3493834 - 326 150398492 - Smed_3302 - oligopeptide/dipeptide ABC transporter, ATPase subunit 3265 61.71 0 3493831..3494859 - 342 150398493 - Smed_3303 - oligopeptide/dipeptide ABC transporter, ATPase subunit 3266 60.98 0 3494864..3495865 - 333 150398494 - Smed_3304 - binding-protein-dependent transport systems inner membrane component 3267 62.88 0 3495875..3496720 - 281 150398495 - Smed_3305 - binding-protein-dependent transport systems inner membrane component 3268 62.51 0 3496870..3498555 - 561 150398496 - Smed_3306 - 5-oxoprolinase (ATP-hydrolyzing) 3269 63.11 0 3498596..3500617 - 673 150398497 - Smed_3307 - 5-oxoprolinase (ATP-hydrolyzing) 3270 58.92 0 3500639..3502225 - 528 150398498 - Smed_3308 - extracellular solute-binding protein 3271 58.73 -1 3502836..3503465 + 209 150398499 - Smed_3309 - XRE family transcriptional regulator 3272 60.23 0 3503641..3504525 + 294 150398500 purU Smed_3310 - formyltetrahydrofolate deformylase 3273 59.79 0 3504719..3505852 + 377 150398501 - Smed_3311 - glycine cleavage T protein (aminomethyl transferase) 3274 63.04 0 3505864..3506469 + 201 150398502 - Smed_3312 - hypothetical protein 3275 61.80 0 3506466..3507431 + 321 150398503 - Smed_3313 - ferredoxin 3276 59.17 0 3507542..3508582 + 346 150398504 - Smed_3314 - hypothetical protein 3277 57.77 -1 3508630..3509967 + 445 150398505 - Smed_3315 - flavin-containing monooxygenase FMO 3278 62.15 0 3510085..3512454 - 789 150398506 - Smed_3316 - glycine cleavage T protein (aminomethyl transferase) 3279 62.46 0 3512684..3514468 + 594 150398507 - Smed_3317 - amino acid permease-associated region 3280 62.98 0 3516048..3516833 - 261 150398508 - Smed_3319 - NAD-dependent epimerase/dehydratase 3281 63.65 0 3516894..3518618 - 574 150398509 - Smed_3320 - dihydroxy-acid dehydratase 3282 63.07 0 3518696..3519418 + 240 150398510 - Smed_3321 - GntR domain-containing protein 3283 65.99 +1 3519651..3520535 + 294 150398511 - Smed_3322 - SMP-30/gluconolaconase/LRE domain-containing protein 3284 62.46 0 3520556..3521197 - 213 150398512 - Smed_3323 - glutathione S-transferase domain-containing protein 3285 61.94 0 3521222..3522301 - 359 150398513 - Smed_3324 - ABC transporter related 3286 61.36 0 3522324..3523397 - 357 150398514 - Smed_3325 - oxidoreductase domain-containing protein 3287 64.60 +1 3523399..3524415 - 338 150398515 - Smed_3326 - oxidoreductase domain-containing protein 3288 62.05 0 3524435..3525322 - 295 150398516 - Smed_3327 - binding-protein-dependent transport systems inner membrane component 3289 61.86 0 3525315..3526271 - 318 150398517 - Smed_3328 - binding-protein-dependent transport systems inner membrane component 3290 64.57 +1 3526276..3527562 - 428 150398518 - Smed_3329 - extracellular solute-binding protein 3291 60.77 0 3527751..3528428 + 225 150398519 - Smed_3330 - TetR family transcriptional regulator 3292 62.32 0 3528552..3529700 + 382 150398520 - Smed_3331 - oxidoreductase domain-containing protein 3293 64.52 +1 3529704..3530867 + 387 150398521 - Smed_3332 - hypothetical protein 3294 63.36 0 3530877..3532298 + 473 150398522 - Smed_3333 - hypothetical protein 3295 65.83 +1 3532318..3533151 + 277 150398523 - Smed_3334 - xylose isomerase domain-containing protein 3296 61.09 0 3533307..3534596 + 429 150398524 - Smed_3335 - oxidoreductase domain-containing protein 3297 66.13 +1 3534676..3536910 + 744 150398525 - Smed_3336 - heavy metal translocating P-type ATPase 3298 62.30 0 3537182..3538717 + 511 150398526 - Smed_3337 - ABC transporter related 3299 61.99 0 3538714..3539847 + 377 150398527 - Smed_3338 - inner-membrane translocator 3300 63.48 0 3539850..3540821 + 323 150398528 - Smed_3339 - inner-membrane translocator 3301 63.18 0 3540825..3541283 + 152 150398529 - Smed_3340 - cytidine deaminase 3302 65.04 +1 3541280..3542077 + 265 150398530 - Smed_3341 - purine nucleoside phosphorylase 3303 66.89 +1 3542078..3543394 + 438 150398531 deoA Smed_3342 - thymidine phosphorylase 3304 60.95 0 3543425..3544054 - 209 150398532 upp Smed_3343 - uracil phosphoribosyltransferase 3305 64.21 0 3544217..3545191 - 324 150398533 - Smed_3344 - adenosine deaminase 3306 65.68 +1 3545188..3546408 - 406 150398534 - Smed_3345 - phosphopentomutase 3307 61.88 0 3546580..3547164 - 194 150398535 - Smed_3346 - hypothetical protein 3308 61.95 0 3547172..3547786 - 204 150398536 - Smed_3347 - TadE family protein 3309 61.70 0 3547955..3548377 - 140 150398537 - Smed_3348 - hypothetical protein 3310 57.53 -1 3548629..3548814 + 61 150398538 - Smed_3349 - Flp/Fap pilin component 61.69 MEAN 2.82 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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