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Sinorhizobium medicae WSM419, complete genome - 1..3781904 3529 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2766 60.20 0 2917751..2918446 + 231 150397994 - Smed_2796 - TetR family transcriptional regulator 2767 60.60 0 2918560..2919399 + 279 150397995 - Smed_2797 - transcription activator effector binding 2768 58.60 -1 2919565..2920320 + 251 150397996 - Smed_2798 - integral membrane protein TerC 2769 60.77 0 2920720..2922177 + 485 150397997 gltX Smed_2799 - glutamyl-tRNA synthetase 2770 60.25 0 2922188..2923684 + 498 150397998 - Smed_2800 - lysyl-tRNA synthetase 2771 64.56 +1 2923767..2924384 - 205 150397999 - Smed_2801 - hypothetical protein 2772 63.42 0 2924595..2925548 + 317 150398000 - Smed_2802 - inosine/uridine-preferring nucleoside hydrolase 2773 63.91 0 2925710..2926726 + 338 150398001 - Smed_2803 - putative mRNA 3-end processing factor 2774 63.32 0 2926730..2928343 + 537 150398002 - Smed_2804 - ATP-dependent DNA ligase 2775 62.15 0 2928501..2931137 + 878 150398003 - Smed_2805 - diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(s) 2776 62.09 0 2931286..2934279 + 997 150398004 - Smed_2806 - putative monovalent cation/H+ antiporter subunit A 2777 61.49 0 2934281..2934628 + 115 150398005 - Smed_2807 - putative monovalent cation/H+ antiporter subunit C 2778 62.65 0 2934621..2936240 + 539 150398006 - Smed_2808 - putative monovalent cation/H+ antiporter subunit D 2779 61.11 0 2936243..2936728 + 161 150398007 - Smed_2809 - cation antiporter 2780 59.22 0 2936725..2937006 + 93 150398008 - Smed_2810 - putative monovalent cation/H+ antiporter subunit F 2781 63.98 0 2937003..2937374 + 123 150398009 - Smed_2811 - monovalent cation/proton antiporter, MnhG/PhaG subunit 2782 67.17 +1 2937405..2938205 - 266 150398010 - Smed_2812 - precorrin-4 C11-methyltransferase 2783 66.99 +1 2938202..2939443 - 413 150398011 - Smed_2813 - precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit 2784 67.67 +2 2939412..2940212 + 266 150398012 - Smed_2814 - cobalt-precorrin-6x reductase 2785 66.67 +1 2940176..2940940 - 254 150398013 - Smed_2815 - precorrin-3B C17-methyltransferase 2786 65.12 +1 2940937..2941710 - 257 150398014 - Smed_2816 - precorrin-2 C(20)-methyltransferase 2787 65.09 +1 2941707..2942339 - 210 150398015 cobH Smed_2817 - precorrin-8X methylmutase 2788 66.74 +1 2942342..2943673 - 443 150398016 - Smed_2818 - precorrin-3B synthase 2789 61.35 0 2943849..2944619 - 256 150398017 - Smed_2819 - precorrin 6A synthase 2790 63.22 0 2944719..2945444 - 241 150398018 - Smed_2820 - uracil-DNA glycosylase 2791 62.85 0 2945643..2946428 + 261 150398019 - Smed_2821 - molybdenum ABC transporter, periplasmic molybdate-binding protein 2792 65.95 +1 2946480..2947181 + 233 150398020 modB Smed_2822 - molybdate ABC transporter permease protein 2793 64.80 +1 2947178..2948251 + 357 150398021 - Smed_2823 - molybdate ABC transporter, ATPase subunit 2794 64.92 +1 2948284..2948742 - 152 150398022 - Smed_2824 - ModE family transcriptional regulator 2795 66.82 +1 2948831..2950162 + 443 150398023 - Smed_2825 - FAD dependent oxidoreductase 2796 63.75 0 2950501..2951733 + 410 150398024 - Smed_2826 - 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) 2797 64.79 +1 2951735..2952748 + 337 150398025 - Smed_2827 - transketolase central region 2798 66.67 +1 2952752..2954032 + 426 150398026 - Smed_2828 - branched-chain alpha-keto acid dehydrogenase subunit E2 2799 65.09 +1 2954038..2955432 + 464 150398027 - Smed_2829 - dihydrolipoamide dehydrogenase 2800 61.02 0 2955462..2956346 - 294 150398028 - Smed_2830 - formyltetrahydrofolate deformylase 2801 62.77 0 2956507..2957148 - 213 150398029 - Smed_2831 - maleylacetoacetate isomerase 2802 64.01 0 2957165..2958181 - 338 150398030 - Smed_2832 - fumarylacetoacetate (FAA) hydrolase 2803 61.82 0 2958275..2959636 - 453 150398031 - Smed_2833 - homogentisate 1,2-dioxygenase 2804 62.96 0 2959713..2960171 + 152 150398032 - Smed_2834 - MarR family transcriptional regulator 2805 61.08 0 2960158..2960676 - 172 150398033 - Smed_2835 - AsnC family transcriptional regulator 2806 59.39 0 2960806..2961918 + 370 150398034 - Smed_2836 - 4-hydroxyphenylpyruvate dioxygenase 2807 57.79 -1 2961997..2962785 - 262 150398035 - Smed_2837 - response regulator receiver protein 2808 56.70 -1 2963705..2964226 + 173 150398036 - Smed_2838 - hypothetical protein 2809 56.97 -1 2964420..2964914 + 164 150398037 - Smed_2839 - hypothetical protein 2810 60.33 0 2965056..2966318 + 420 150398038 - Smed_2840 - tetratricopeptide TPR_4 2811 55.36 -2 2966343..2967386 - 347 150398039 - Smed_2841 - hypothetical protein 2812 59.21 0 2967709..2969694 + 661 150398040 - Smed_2842 - diguanylate cyclase/phosphodiesterase 2813 60.93 0 2969759..2970490 - 243 150398041 - Smed_2843 - GntR family transcriptional regulator 2814 61.14 0 2970719..2971732 + 337 150398042 - Smed_2844 - sugar isomerase (SIS) 2815 65.07 +1 2971817..2972629 + 270 150398043 - Smed_2845 - ribokinase-like domain-containing protein 2816 62.04 0 2972988..2973743 - 251 150398044 - Smed_2846 - ABC transporter related 2817 65.31 +1 2973759..2974640 - 293 150398045 - Smed_2847 - hypothetical protein 2818 59.05 0 2974630..2975601 - 323 150398046 - Smed_2848 - polar amino acid ABC transporter, inner membrane subunit 2819 62.53 0 2975619..2976899 - 426 150398047 - Smed_2849 - FAD dependent oxidoreductase 2820 60.75 0 2976966..2977793 - 275 150398048 - Smed_2850 - extracellular solute-binding protein 2821 61.62 0 2978142..2979092 - 316 150398049 - Smed_2851 - xylose isomerase domain-containing protein 2822 61.98 0 2979125..2979892 - 255 150398050 - Smed_2852 - glycerophosphoryl diester phosphodiesterase 2823 63.15 0 2979899..2980780 - 293 150398051 - Smed_2853 - binding-protein-dependent transport systems inner membrane component 2824 62.24 0 2980900..2981826 - 308 150398052 - Smed_2854 - binding-protein-dependent transport systems inner membrane component 2825 65.37 +1 2981823..2982821 - 332 150398053 - Smed_2855 - oligopeptide/dipeptide ABC transporter, ATPase subunit 2826 64.11 0 2982818..2983834 - 338 150398054 - Smed_2856 - oligopeptide/dipeptide ABC transporter, ATPase subunit 2827 62.12 0 2983926..2985554 - 542 150398055 - Smed_2857 - extracellular solute-binding protein 2828 61.52 0 2985871..2986803 + 310 150398056 - Smed_2858 - DeoR family transcriptional regulator 2829 55.72 -2 2986873..2987283 - 136 150398057 - Smed_2859 - PilT domain-containing protein 2830 62.90 0 2987370..2988299 - 309 150398058 - Smed_2860 - integrase catalytic region 2831 55.81 -2 2988293..2988559 - 88 150398059 - Smed_2861 - transposase IS3/IS911 family protein 2832 59.55 0 2988713..2988979 - 88 150398060 - Smed_2862 - hypothetical protein 2833 61.39 0 2995617..2996564 - 315 150398061 - Smed_2863 - LysR family transcriptional regulator 2834 60.86 0 2996806..2998011 + 401 150398062 - Smed_2864 - putative periplasmic binding ABC transporter protein 2835 65.14 +1 2998023..2998808 + 261 150398063 - Smed_2865 - ABC transporter related 2836 62.82 0 2998808..2999509 + 233 150398064 - Smed_2866 - ABC transporter related 2837 61.04 0 2999513..3000400 + 295 150398065 - Smed_2867 - inner-membrane translocator 2838 60.02 0 3000402..3001394 + 330 150398066 - Smed_2868 - inner-membrane translocator 2839 63.78 0 3001539..3003134 + 531 150398067 - Smed_2869 - glucose-methanol-choline oxidoreductase 2840 62.98 0 3003180..3006953 - 1257 150398068 metH Smed_2870 - B12-dependent methionine synthase 2841 64.66 +1 3007133..3008281 - 382 150398069 - Smed_2871 - mannose-6-phosphate isomerase 2842 61.41 0 3008298..3008792 - 164 150398070 - Smed_2872 - hypothetical protein 2843 63.21 0 3008857..3009753 - 298 150398071 - Smed_2873 - ROK family protein 2844 56.52 -1 3010234..3010440 - 68 150398072 - Smed_2874 - cold-shock DNA-binding domain-containing protein 2845 58.78 -1 3010605..3010883 - 92 150398073 - Smed_2875 - hypothetical protein 2846 55.28 -2 3011121..3011489 + 122 150398074 - Smed_2876 - PRC-barrel domain-containing protein 2847 56.41 -1 3011621..3011815 - 64 150398075 - Smed_2877 - putative transmembrane protein 2848 61.71 0 3011926..3012651 - 241 150398076 - Smed_2878 - protein of unknown function DUF306 Meta and HslJ 2849 65.48 +1 3012811..3013986 + 391 150398077 - Smed_2879 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase 2850 61.34 0 3014115..3015335 - 406 150398078 - Smed_2880 - 5-aminolevulinate synthase 2851 63.41 0 3015678..3016475 - 265 150398079 - Smed_2881 - carbon-monoxide dehydrogenase (acceptor) 2852 62.92 0 3016491..3018836 - 781 150398080 - Smed_2882 - aldehyde oxidase and xanthine dehydrogenase molybdopterin binding 2853 63.19 0 3018936..3019424 - 162 150398081 - Smed_2883 - 2Fe-2S iron-sulfur cluster binding domain-containing protein 2854 61.80 0 3019690..3020100 + 136 150398082 - Smed_2884 - 17 kDa surface antigen 2855 60.84 0 3020272..3022038 - 588 150398083 - Smed_2885 - adenylyl cyclase class-3/4/guanylyl cyclase 2856 60.60 0 3022256..3023128 + 290 150398084 - Smed_2886 - alpha/beta hydrolase fold 2857 63.74 0 3023390..3025303 + 637 150398085 - Smed_2887 - surface antigen (D15) 2858 64.92 +1 3025440..3031049 + 1869 150398086 - Smed_2888 - hypothetical protein 2859 65.42 +1 3031174..3031653 - 159 150398087 - Smed_2889 - glyoxalase/bleomycin resistance protein/dioxygenase 2860 62.07 0 3031856..3032290 - 144 150398088 - Smed_2890 - AsnC family transcriptional regulator 2861 64.07 0 3032444..3033367 + 307 150398089 - Smed_2891 - arginase 2862 60.00 0 3033587..3034066 + 159 150398090 - Smed_2892 - putative CheW protein 2863 62.54 0 3034164..3035933 + 589 150398091 - Smed_2893 - methyl-accepting chemotaxis sensory transducer 2864 60.02 0 3036010..3036942 - 310 150398092 - Smed_2894 - transposase IS116/IS110/IS902 family protein 2865 57.58 -1 3037230..3037460 - 76 150398093 - Smed_2895 - putative NAD-dependent formate dehydrogenase delta subunit protein 61.69 MEAN 2.82 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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