version 1.0
Sinorhizobium medicae WSM419, complete genome - 1..3781904 3529 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2700 63.24 0 2842057..2842581 - 174 150397928 - Smed_2730 - ECF subfamily RNA polymerase sigma-24 factor 2701 65.32 +1 2842761..2843207 - 148 150397929 - Smed_2731 - MarR family transcriptional regulator 2702 58.65 -1 2843353..2843826 + 157 150397930 - Smed_2732 - hypothetical protein 2703 61.55 0 2844055..2844816 + 253 150397931 - Smed_2733 - glyoxalase/bleomycin resistance protein/dioxygenase 2704 66.34 +1 2844864..2845775 - 303 150397932 - Smed_2734 - LysR family transcriptional regulator 2705 63.29 0 2845880..2846914 + 344 150397933 - Smed_2735 - aldo/keto reductase 2706 63.55 0 2847135..2849543 + 802 150397934 - Smed_2736 - hypothetical protein 2707 63.37 0 2849558..2850436 + 292 150397935 - Smed_2737 - transglutaminase domain-containing protein 2708 62.14 0 2850614..2851873 + 419 150397936 - Smed_2738 - von Willebrand factor type A 2709 61.23 0 2852081..2854546 + 821 150397937 - Smed_2739 - glycogen/starch/alpha-glucan phosphorylase 2710 62.10 0 2854543..2856753 + 736 150397938 - Smed_2740 - glycogen branching enzyme 2711 61.27 0 2856865..2858124 + 419 150397939 glgC Smed_2741 - glucose-1-phosphate adenylyltransferase 2712 62.65 0 2858131..2859573 + 480 150397940 glgA Smed_2742 - glycogen synthase 2713 62.12 0 2859579..2861207 + 542 150397941 - Smed_2743 - phosphoglucomutase 2714 63.82 0 2861322..2863286 + 654 150397942 - Smed_2744 - glycogen debranching enzyme GlgX 2715 58.49 -1 2863361..2863849 + 162 150397943 - Smed_2745 - dehydratase 2716 64.89 +1 2863842..2864909 + 355 150397944 - Smed_2746 - hypothetical protein 2717 64.69 +1 2864933..2866144 - 403 150397945 - Smed_2747 - alcohol dehydrogenase 2718 53.27 -2 2866281..2866952 + 223 150397946 - Smed_2748 - hypothetical protein 2719 68.29 +2 2867095..2867649 - 184 150397947 - Smed_2749 - sarcosine oxidase gamma subunit family protein 2720 63.89 0 2867642..2870635 - 997 150397948 - Smed_2750 - sarcosine oxidase alpha subunit family protein 2721 57.02 -1 2870632..2870973 - 113 150397949 - Smed_2751 - sarcosine oxidase delta subunit family protein 2722 62.28 0 2871093..2872346 - 417 150397950 - Smed_2752 - sarcosine oxidase beta subunit family protein 2723 60.65 0 2872653..2872868 + 71 150397951 rpsU Smed_2753 - 30S ribosomal protein S21 2724 62.73 0 2873062..2873949 + 295 150397952 - Smed_2754 - TPR repeat-containing protein 2725 62.66 0 2874085..2874558 + 157 150397953 - Smed_2755 - hypothetical protein 2726 60.03 0 2874835..2876055 + 406 150397954 - Smed_2756 - putative adenylate/guanylate cyclase 2727 61.75 0 2876187..2877590 - 467 150397955 - Smed_2757 - NAD(P)(+) transhydrogenase (AB-specific) 2728 62.53 0 2877600..2878010 - 136 150397956 - Smed_2758 - putative NAD(P) transhydrogenase subunit alpha PART 2 transmembrane protein 2729 64.23 0 2878011..2879159 - 382 150397957 - Smed_2759 - NAD(P) transhydrogenase subunit alpha 2730 52.00 -2 2879471..2879695 - 74 150397958 - Smed_2760 - aa3 type cytochrome c oxidase subunit IV 2731 60.12 0 2879906..2882272 - 788 150397959 - Smed_2761 - diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) 2732 64.95 +1 2882653..2883408 + 251 150397960 - Smed_2762 - peptidase C26 2733 63.15 0 2883405..2884370 - 321 150397961 - Smed_2763 - D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding 2734 62.66 0 2884444..2885466 - 340 150397962 - Smed_2764 - alanine racemase 2735 64.29 0 2885558..2886061 - 167 150397963 - Smed_2765 - MarR family transcriptional regulator 2736 63.76 0 2886175..2886966 + 263 150397964 - Smed_2766 - creatininase 2737 60.36 0 2887097..2888206 + 369 150397965 - Smed_2767 - cobalamin synthesis protein P47K 2738 65.96 +1 2888271..2889260 + 329 150397966 - Smed_2768 - WD-40 repeat-containing protein 2739 59.96 0 2889341..2889787 - 148 150397967 - Smed_2769 - hypothetical protein 2740 62.68 0 2889978..2890679 + 233 150397968 - Smed_2770 - lysine exporter protein LysE/YggA 2741 67.85 +2 2890698..2891288 - 196 150397969 - Smed_2771 - GCN5-related N-acetyltransferase 2742 62.79 0 2891376..2892509 - 377 150397970 - Smed_2772 - Orn/DAP/Arg decarboxylase 2 2743 60.00 0 2893045..2893959 + 304 150397971 - Smed_2773 - LysR family transcriptional regulator 2744 58.60 -1 2894081..2894725 + 214 150397972 - Smed_2774 - hypothetical protein 2745 64.10 0 2894719..2895732 + 337 150397973 - Smed_2775 - high-affinity nickel-transporter 2746 58.69 -1 2895844..2896056 - 70 150397974 - Smed_2776 - hypothetical protein 2747 60.09 0 2896053..2896751 - 232 150397975 - Smed_2777 - GCN5-related N-acetyltransferase 2748 65.11 +1 2896867..2897571 - 234 150397976 - Smed_2778 - hypothetical protein 2749 66.51 +1 2897734..2898372 - 212 150397977 - Smed_2779 - keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase 2750 62.87 0 2898599..2899072 + 157 150397978 - Smed_2780 - adenylate cyclase 2751 62.90 0 2899069..2899971 + 300 150397979 - Smed_2781 - CHAD domain-containing protein 2752 61.08 0 2900053..2901000 + 315 150397980 - Smed_2782 - rhodanese domain-containing protein 2753 60.10 0 2901116..2901892 - 258 150397981 - Smed_2783 - YaeC family lipoprotein 2754 64.26 0 2901931..2902596 - 221 150397982 - Smed_2784 - binding-protein-dependent transport systems inner membrane component 2755 64.35 0 2902586..2903665 - 359 150397983 - Smed_2785 - ABC transporter related 2756 60.98 0 2903962..2905368 - 468 150397984 - Smed_2786 - Beta-glucosidase 2757 62.70 0 2905673..2906857 - 394 150397985 - Smed_2787 - oxidoreductase domain-containing protein 2758 61.73 0 2907028..2908080 - 350 150397986 - Smed_2788 - xylose isomerase domain-containing protein 2759 60.34 0 2908274..2909584 - 436 150397987 - Smed_2789 - xylose isomerase 2760 64.43 0 2909717..2910073 + 118 150397988 - Smed_2790 - hypothetical protein 2761 66.53 +1 2910112..2911566 - 484 150397989 - Smed_2791 - xylulokinase 2762 65.03 +1 2911576..2912613 - 345 150397990 - Smed_2792 - regulatory protein LacI 2763 61.00 0 2913150..2914526 + 458 150397991 - Smed_2793 - peptidase S41 2764 61.89 0 2914672..2916261 - 529 150397992 - Smed_2794 - EmrB/QacA family drug resistance transporter 2765 63.85 0 2916292..2917500 - 402 150397993 - Smed_2795 - secretion protein HlyD family protein 2766 60.20 0 2917751..2918446 + 231 150397994 - Smed_2796 - TetR family transcriptional regulator 2767 60.60 0 2918560..2919399 + 279 150397995 - Smed_2797 - transcription activator effector binding 2768 58.60 -1 2919565..2920320 + 251 150397996 - Smed_2798 - integral membrane protein TerC 2769 60.77 0 2920720..2922177 + 485 150397997 gltX Smed_2799 - glutamyl-tRNA synthetase 2770 60.25 0 2922188..2923684 + 498 150397998 - Smed_2800 - lysyl-tRNA synthetase 2771 64.56 +1 2923767..2924384 - 205 150397999 - Smed_2801 - hypothetical protein 2772 63.42 0 2924595..2925548 + 317 150398000 - Smed_2802 - inosine/uridine-preferring nucleoside hydrolase 2773 63.91 0 2925710..2926726 + 338 150398001 - Smed_2803 - putative mRNA 3-end processing factor 2774 63.32 0 2926730..2928343 + 537 150398002 - Smed_2804 - ATP-dependent DNA ligase 2775 62.15 0 2928501..2931137 + 878 150398003 - Smed_2805 - diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(s) 2776 62.09 0 2931286..2934279 + 997 150398004 - Smed_2806 - putative monovalent cation/H+ antiporter subunit A 2777 61.49 0 2934281..2934628 + 115 150398005 - Smed_2807 - putative monovalent cation/H+ antiporter subunit C 2778 62.65 0 2934621..2936240 + 539 150398006 - Smed_2808 - putative monovalent cation/H+ antiporter subunit D 2779 61.11 0 2936243..2936728 + 161 150398007 - Smed_2809 - cation antiporter 2780 59.22 0 2936725..2937006 + 93 150398008 - Smed_2810 - putative monovalent cation/H+ antiporter subunit F 2781 63.98 0 2937003..2937374 + 123 150398009 - Smed_2811 - monovalent cation/proton antiporter, MnhG/PhaG subunit 2782 67.17 +1 2937405..2938205 - 266 150398010 - Smed_2812 - precorrin-4 C11-methyltransferase 2783 66.99 +1 2938202..2939443 - 413 150398011 - Smed_2813 - precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit 2784 67.67 +2 2939412..2940212 + 266 150398012 - Smed_2814 - cobalt-precorrin-6x reductase 2785 66.67 +1 2940176..2940940 - 254 150398013 - Smed_2815 - precorrin-3B C17-methyltransferase 2786 65.12 +1 2940937..2941710 - 257 150398014 - Smed_2816 - precorrin-2 C(20)-methyltransferase 2787 65.09 +1 2941707..2942339 - 210 150398015 cobH Smed_2817 - precorrin-8X methylmutase 2788 66.74 +1 2942342..2943673 - 443 150398016 - Smed_2818 - precorrin-3B synthase 2789 61.35 0 2943849..2944619 - 256 150398017 - Smed_2819 - precorrin 6A synthase 2790 63.22 0 2944719..2945444 - 241 150398018 - Smed_2820 - uracil-DNA glycosylase 2791 62.85 0 2945643..2946428 + 261 150398019 - Smed_2821 - molybdenum ABC transporter, periplasmic molybdate-binding protein 2792 65.95 +1 2946480..2947181 + 233 150398020 modB Smed_2822 - molybdate ABC transporter permease protein 2793 64.80 +1 2947178..2948251 + 357 150398021 - Smed_2823 - molybdate ABC transporter, ATPase subunit 2794 64.92 +1 2948284..2948742 - 152 150398022 - Smed_2824 - ModE family transcriptional regulator 2795 66.82 +1 2948831..2950162 + 443 150398023 - Smed_2825 - FAD dependent oxidoreductase 2796 63.75 0 2950501..2951733 + 410 150398024 - Smed_2826 - 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) 2797 64.79 +1 2951735..2952748 + 337 150398025 - Smed_2827 - transketolase central region 2798 66.67 +1 2952752..2954032 + 426 150398026 - Smed_2828 - branched-chain alpha-keto acid dehydrogenase subunit E2 2799 65.09 +1 2954038..2955432 + 464 150398027 - Smed_2829 - dihydrolipoamide dehydrogenase 61.69 MEAN 2.82 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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