version 1.0
Sinorhizobium medicae WSM419, complete genome - 1..3781904 3529 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2666 61.99 0 2802494..2803990 - 498 150397894 - Smed_2696 - extracellular solute-binding protein 2667 61.56 0 2804060..2804941 - 293 150397895 - Smed_2697 - binding-protein-dependent transport systems inner membrane component 2668 61.15 0 2804943..2805830 - 295 150397896 - Smed_2698 - binding-protein-dependent transport systems inner membrane component 2669 64.26 0 2805966..2807501 - 511 150397897 glpD Smed_2699 - glycerol-3-phosphate dehydrogenase 2670 64.33 0 2807498..2808310 - 270 150397898 - Smed_2700 - HAD family hydrolase 2671 64.09 0 2808315..2809670 - 451 150397899 - Smed_2701 - 3-dehydroquinate synthase 2672 62.28 0 2809744..2810769 + 341 150397900 - Smed_2702 - DeoR family transcriptional regulator 2673 65.39 +1 2810824..2812389 + 521 150397901 - Smed_2703 - carbohydrate kinase FGGY 2674 61.26 0 2812499..2813497 + 332 150397902 - Smed_2704 - band 7 protein 2675 67.54 +2 2813494..2813949 + 151 150397903 - Smed_2705 - hypothetical protein 2676 65.03 +1 2814057..2815460 + 467 150397904 - Smed_2706 - hypothetical protein 2677 61.49 0 2815524..2816411 - 295 150397905 - Smed_2707 - UTP-glucose-1-phosphate uridylyltransferase 2678 60.43 0 2816713..2817930 + 405 150397906 - Smed_2708 - lytic murein transglycosylase 2679 62.83 0 2818041..2819291 + 416 150397907 - Smed_2709 - hypothetical protein 2680 63.37 0 2819477..2820934 - 485 150397908 gltD Smed_2710 - glutamate synthase subunit beta 2681 62.90 0 2821036..2825760 - 1574 150397909 - Smed_2711 - glutamate synthase (ferredoxin) 2682 64.37 0 2826338..2827384 + 348 150397910 - Smed_2712 - threonine aldolase 2683 63.95 0 2827417..2828262 - 281 150397911 - Smed_2713 - LysR family transcriptional regulator 2684 62.95 0 2828354..2829349 + 331 150397912 - Smed_2714 - bile acid:sodium symporter 2685 58.23 -1 2829411..2829872 - 153 150397913 - Smed_2715 - heat shock protein Hsp20 2686 64.10 0 2830247..2831260 + 337 150397914 - Smed_2716 - alpha/beta hydrolase fold 2687 62.86 0 2831287..2832153 - 288 150397915 - Smed_2717 - histidinol-phosphate phosphatase, putative 2688 62.24 0 2832368..2833249 - 293 150397916 - Smed_2718 - N-formylglutamate amidohydrolase 2689 58.40 -1 2833438..2833800 + 120 150397917 - Smed_2719 - response regulator receiver protein 2690 60.42 0 2834218..2834457 - 79 150397918 - Smed_2720 - HicB family protein 2691 60.72 0 2835011..2835397 + 128 150397919 - Smed_2721 - Sel1 domain-containing protein 2692 61.82 0 2835699..2835863 + 54 150397920 - Smed_2722 - hypothetical protein 2693 64.17 0 2835974..2837812 + 612 150397921 - Smed_2723 - dihydroxy-acid dehydratase 2694 57.78 -1 2837880..2838284 - 134 150397922 - Smed_2724 - glutathione-dependent formaldehyde-activating GFA 2695 63.25 0 2838386..2838853 + 155 150397923 - Smed_2725 - MarR family transcriptional regulator 2696 58.11 -1 2839003..2839446 - 147 150397924 - Smed_2726 - pseudoazurin 2697 61.99 0 2839490..2839831 - 113 150397925 - Smed_2727 - putative cytochrome c protein 2698 61.38 0 2839910..2841139 - 409 150397926 - Smed_2728 - oxidoreductase molybdopterin binding 2699 65.49 +1 2841299..2842060 - 253 150397927 - Smed_2729 - putative transmembrane anti-sigma factor 2700 63.24 0 2842057..2842581 - 174 150397928 - Smed_2730 - ECF subfamily RNA polymerase sigma-24 factor 2701 65.32 +1 2842761..2843207 - 148 150397929 - Smed_2731 - MarR family transcriptional regulator 2702 58.65 -1 2843353..2843826 + 157 150397930 - Smed_2732 - hypothetical protein 2703 61.55 0 2844055..2844816 + 253 150397931 - Smed_2733 - glyoxalase/bleomycin resistance protein/dioxygenase 2704 66.34 +1 2844864..2845775 - 303 150397932 - Smed_2734 - LysR family transcriptional regulator 2705 63.29 0 2845880..2846914 + 344 150397933 - Smed_2735 - aldo/keto reductase 2706 63.55 0 2847135..2849543 + 802 150397934 - Smed_2736 - hypothetical protein 2707 63.37 0 2849558..2850436 + 292 150397935 - Smed_2737 - transglutaminase domain-containing protein 2708 62.14 0 2850614..2851873 + 419 150397936 - Smed_2738 - von Willebrand factor type A 2709 61.23 0 2852081..2854546 + 821 150397937 - Smed_2739 - glycogen/starch/alpha-glucan phosphorylase 2710 62.10 0 2854543..2856753 + 736 150397938 - Smed_2740 - glycogen branching enzyme 2711 61.27 0 2856865..2858124 + 419 150397939 glgC Smed_2741 - glucose-1-phosphate adenylyltransferase 2712 62.65 0 2858131..2859573 + 480 150397940 glgA Smed_2742 - glycogen synthase 2713 62.12 0 2859579..2861207 + 542 150397941 - Smed_2743 - phosphoglucomutase 2714 63.82 0 2861322..2863286 + 654 150397942 - Smed_2744 - glycogen debranching enzyme GlgX 2715 58.49 -1 2863361..2863849 + 162 150397943 - Smed_2745 - dehydratase 2716 64.89 +1 2863842..2864909 + 355 150397944 - Smed_2746 - hypothetical protein 2717 64.69 +1 2864933..2866144 - 403 150397945 - Smed_2747 - alcohol dehydrogenase 2718 53.27 -2 2866281..2866952 + 223 150397946 - Smed_2748 - hypothetical protein 2719 68.29 +2 2867095..2867649 - 184 150397947 - Smed_2749 - sarcosine oxidase gamma subunit family protein 2720 63.89 0 2867642..2870635 - 997 150397948 - Smed_2750 - sarcosine oxidase alpha subunit family protein 2721 57.02 -1 2870632..2870973 - 113 150397949 - Smed_2751 - sarcosine oxidase delta subunit family protein 2722 62.28 0 2871093..2872346 - 417 150397950 - Smed_2752 - sarcosine oxidase beta subunit family protein 2723 60.65 0 2872653..2872868 + 71 150397951 rpsU Smed_2753 - 30S ribosomal protein S21 2724 62.73 0 2873062..2873949 + 295 150397952 - Smed_2754 - TPR repeat-containing protein 2725 62.66 0 2874085..2874558 + 157 150397953 - Smed_2755 - hypothetical protein 2726 60.03 0 2874835..2876055 + 406 150397954 - Smed_2756 - putative adenylate/guanylate cyclase 2727 61.75 0 2876187..2877590 - 467 150397955 - Smed_2757 - NAD(P)(+) transhydrogenase (AB-specific) 2728 62.53 0 2877600..2878010 - 136 150397956 - Smed_2758 - putative NAD(P) transhydrogenase subunit alpha PART 2 transmembrane protein 2729 64.23 0 2878011..2879159 - 382 150397957 - Smed_2759 - NAD(P) transhydrogenase subunit alpha 2730 52.00 -2 2879471..2879695 - 74 150397958 - Smed_2760 - aa3 type cytochrome c oxidase subunit IV 2731 60.12 0 2879906..2882272 - 788 150397959 - Smed_2761 - diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) 2732 64.95 +1 2882653..2883408 + 251 150397960 - Smed_2762 - peptidase C26 2733 63.15 0 2883405..2884370 - 321 150397961 - Smed_2763 - D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding 2734 62.66 0 2884444..2885466 - 340 150397962 - Smed_2764 - alanine racemase 2735 64.29 0 2885558..2886061 - 167 150397963 - Smed_2765 - MarR family transcriptional regulator 2736 63.76 0 2886175..2886966 + 263 150397964 - Smed_2766 - creatininase 2737 60.36 0 2887097..2888206 + 369 150397965 - Smed_2767 - cobalamin synthesis protein P47K 2738 65.96 +1 2888271..2889260 + 329 150397966 - Smed_2768 - WD-40 repeat-containing protein 2739 59.96 0 2889341..2889787 - 148 150397967 - Smed_2769 - hypothetical protein 2740 62.68 0 2889978..2890679 + 233 150397968 - Smed_2770 - lysine exporter protein LysE/YggA 2741 67.85 +2 2890698..2891288 - 196 150397969 - Smed_2771 - GCN5-related N-acetyltransferase 2742 62.79 0 2891376..2892509 - 377 150397970 - Smed_2772 - Orn/DAP/Arg decarboxylase 2 2743 60.00 0 2893045..2893959 + 304 150397971 - Smed_2773 - LysR family transcriptional regulator 2744 58.60 -1 2894081..2894725 + 214 150397972 - Smed_2774 - hypothetical protein 2745 64.10 0 2894719..2895732 + 337 150397973 - Smed_2775 - high-affinity nickel-transporter 2746 58.69 -1 2895844..2896056 - 70 150397974 - Smed_2776 - hypothetical protein 2747 60.09 0 2896053..2896751 - 232 150397975 - Smed_2777 - GCN5-related N-acetyltransferase 2748 65.11 +1 2896867..2897571 - 234 150397976 - Smed_2778 - hypothetical protein 2749 66.51 +1 2897734..2898372 - 212 150397977 - Smed_2779 - keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase 2750 62.87 0 2898599..2899072 + 157 150397978 - Smed_2780 - adenylate cyclase 2751 62.90 0 2899069..2899971 + 300 150397979 - Smed_2781 - CHAD domain-containing protein 2752 61.08 0 2900053..2901000 + 315 150397980 - Smed_2782 - rhodanese domain-containing protein 2753 60.10 0 2901116..2901892 - 258 150397981 - Smed_2783 - YaeC family lipoprotein 2754 64.26 0 2901931..2902596 - 221 150397982 - Smed_2784 - binding-protein-dependent transport systems inner membrane component 2755 64.35 0 2902586..2903665 - 359 150397983 - Smed_2785 - ABC transporter related 2756 60.98 0 2903962..2905368 - 468 150397984 - Smed_2786 - Beta-glucosidase 2757 62.70 0 2905673..2906857 - 394 150397985 - Smed_2787 - oxidoreductase domain-containing protein 2758 61.73 0 2907028..2908080 - 350 150397986 - Smed_2788 - xylose isomerase domain-containing protein 2759 60.34 0 2908274..2909584 - 436 150397987 - Smed_2789 - xylose isomerase 2760 64.43 0 2909717..2910073 + 118 150397988 - Smed_2790 - hypothetical protein 2761 66.53 +1 2910112..2911566 - 484 150397989 - Smed_2791 - xylulokinase 2762 65.03 +1 2911576..2912613 - 345 150397990 - Smed_2792 - regulatory protein LacI 2763 61.00 0 2913150..2914526 + 458 150397991 - Smed_2793 - peptidase S41 2764 61.89 0 2914672..2916261 - 529 150397992 - Smed_2794 - EmrB/QacA family drug resistance transporter 2765 63.85 0 2916292..2917500 - 402 150397993 - Smed_2795 - secretion protein HlyD family protein 61.69 MEAN 2.82 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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