version 1.0
Sinorhizobium medicae WSM419, complete genome - 1..3781904 3529 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2171 62.05 0 2277553..2280000 - 815 150397399 - Smed_2198 - FAD dependent oxidoreductase 2172 62.17 0 2280123..2280968 + 281 150397400 - Smed_2199 - LysR family transcriptional regulator 2173 63.51 0 2281006..2282685 - 559 150397401 - Smed_2200 - hypothetical protein 2174 62.23 0 2282883..2284166 + 427 150397402 - Smed_2201 - methionine gamma-lyase 2175 62.29 0 2284287..2284583 - 98 150397403 - Smed_2202 - helix-turn-helix domain-containing protein 2176 59.72 0 2285035..2285394 - 119 150397404 - Smed_2204 - glyoxalase/bleomycin resistance protein/dioxygenase 2177 61.08 0 2285391..2285999 - 202 150397405 - Smed_2205 - TetR family transcriptional regulator 2178 64.27 0 2286083..2286874 + 263 150397406 - Smed_2206 - enoyl-CoA hydratase 2179 62.92 0 2286888..2287367 - 159 150397407 - Smed_2207 - hypothetical protein 2180 64.84 +1 2287417..2288730 - 437 150397408 - Smed_2208 - hypothetical protein 2181 62.39 0 2288962..2289756 + 264 150397409 - Smed_2209 - hypothetical protein 2182 56.76 -1 2289863..2290084 - 73 150397410 - Smed_2210 - hypothetical protein 2183 65.35 +1 2290220..2291434 - 404 150397411 - Smed_2211 - hypothetical protein 2184 57.69 -1 2291431..2291664 - 77 150397412 - Smed_2212 - hypothetical protein 2185 63.02 0 2291664..2293502 - 612 150397413 - Smed_2213 - SARP family transcriptional regulator 2186 61.87 0 2293869..2294660 + 263 150397414 - Smed_2214 - aminoglycoside N(3')-acetyltransferase 2187 58.33 -1 2294701..2294976 - 91 150397415 - Smed_2215 - XRE family transcriptional regulator 2188 62.89 0 2295456..2296250 + 264 150397416 - Smed_2216 - hypothetical protein 2189 68.36 +2 2296443..2296796 - 117 150397417 - Smed_2217 - putative signal peptide protein 2190 62.96 0 2296935..2297339 - 134 150397418 - Smed_2218 - hypothetical protein 2191 62.88 0 2297433..2297855 - 140 150397419 - Smed_2219 - hypothetical protein 2192 60.45 0 2297891..2298244 - 117 150397420 - Smed_2220 - hypothetical protein 2193 61.58 0 2298358..2298927 - 189 150397421 - Smed_2221 - putative transmembrane protein 2194 60.88 0 2299152..2299445 - 97 150397422 - Smed_2222 - GYD family protein 2195 60.49 0 2299716..2301770 - 684 150397423 - Smed_2223 - RNA polymerase sigma factor RpoD 2196 60.10 0 2302218..2303252 - 344 150397424 tdh Smed_2224 - L-threonine 3-dehydrogenase 2197 62.12 0 2303293..2304480 - 395 150397425 - Smed_2225 - 2-amino-3-ketobutyrate coenzyme A ligase 2198 64.09 0 2304702..2306645 - 647 150397426 - Smed_2226 - ATP-dependent DNA helicase RecQ 2199 64.43 0 2306655..2308670 - 671 150397427 dnaG Smed_2227 - DNA primase 2200 60.00 0 2308865..2309314 - 149 150397428 - Smed_2228 - GatB/Yqey domain-containing protein 2201 63.76 0 2309639..2310844 + 401 150397429 - Smed_2229 - carbamoyl phosphate synthase small subunit 2202 62.74 0 2310883..2311773 - 296 150397430 - Smed_2230 - LysR family transcriptional regulator 2203 64.96 +1 2311887..2312648 + 253 150397431 - Smed_2231 - short-chain dehydrogenase/reductase SDR 2204 63.21 0 2312675..2313541 + 288 150397432 - Smed_2232 - 6-phosphogluconate dehydrogenase NAD-binding 2205 62.76 0 2313662..2314864 - 400 150397433 - Smed_2233 - aspartate aminotransferase 2206 59.09 0 2315185..2315382 + 65 150397434 - Smed_2234 - hypothetical protein 2207 57.24 -1 2315351..2315647 + 98 150397435 - Smed_2235 - hypothetical protein 2208 62.89 0 2315788..2316978 + 396 150397436 - Smed_2236 - glucose sorbosone dehydrogenase 2209 62.35 0 2317161..2318063 + 300 150397437 - Smed_2237 - hypothetical protein 2210 56.02 -2 2318728..2318943 + 71 150397438 - Smed_2238 - cold-shock DNA-binding domain-containing protein 2211 64.99 +1 2319088..2319504 + 138 150397439 - Smed_2239 - hypothetical protein 2212 60.90 0 2319581..2320222 - 213 150397440 - Smed_2240 - beta-lactamase domain-containing protein 2213 59.62 0 2320331..2320486 - 51 150397441 - Smed_2241 - hypothetical protein 2214 64.30 0 2320673..2321305 + 210 150397442 - Smed_2242 - hypothetical protein 2215 64.79 +1 2321626..2321892 + 88 150397443 - Smed_2243 - hypothetical protein 2216 60.04 0 2322086..2322568 + 160 150397444 - Smed_2244 - MarR family transcriptional regulator 2217 60.68 0 2322842..2323543 + 233 150397445 - Smed_2245 - two component transcriptional regulator 2218 61.52 0 2323543..2324961 + 472 150397446 - Smed_2246 - integral membrane sensor signal transduction histidine kinase 2219 56.73 -1 2325063..2325404 - 113 150397447 - Smed_2247 - export-related chaperone CsaA 2220 62.72 0 2325437..2326399 - 320 150397448 - Smed_2248 - LysR family transcriptional regulator 2221 66.18 +1 2326652..2327476 - 274 150397449 - Smed_2249 - pyrroline-5-carboxylate reductase 2222 58.08 -1 2327478..2327978 - 166 150397450 - Smed_2250 - hypothetical protein 2223 64.60 +1 2328434..2328724 - 96 150397451 - Smed_2251 - hypothetical protein 2224 62.87 0 2328999..2329841 + 280 150397452 - Smed_2252 - prolipoprotein diacylglyceryl transferase 2225 63.32 0 2329853..2330956 + 367 150397453 - Smed_2253 - hypothetical protein 2226 63.77 0 2331084..2331878 + 264 150397454 - Smed_2254 - hypothetical protein 2227 61.89 0 2331880..2333031 + 383 150397455 - Smed_2255 - peptidase M24 2228 65.87 +1 2333289..2334167 + 292 150397456 - Smed_2256 - hypothetical protein 2229 61.31 0 2334452..2335384 + 310 150397457 - Smed_2257 - ribose-phosphate pyrophosphokinase 2230 64.50 0 2335436..2336266 - 276 150397458 - Smed_2258 - hypothetical protein 2231 63.25 0 2336339..2336719 - 126 150397459 - Smed_2259 - hypothetical protein 2232 62.09 0 2336801..2338309 - 502 150397460 - Smed_2260 - aldehyde dehydrogenase 2233 66.88 +1 2338448..2339404 - 318 150397461 - Smed_2261 - Fis family transcriptional regulator 2234 65.45 +1 2339662..2340894 + 410 150397462 - Smed_2262 - benzoate transporter 2235 60.10 0 2341107..2341730 + 207 150397463 - Smed_2263 - 50S ribosomal protein L25/general stress protein Ctc 2236 59.84 0 2342028..2342774 + 248 150397464 - Smed_2264 - peptidyl-tRNA hydrolase 2237 58.82 -1 2342797..2343102 - 101 150397465 clpS Smed_2265 - ATP-dependent Clp protease adaptor 2238 61.87 0 2343331..2344434 + 367 150397466 - Smed_2266 - translation-associated GTPase 2239 61.28 0 2344465..2345523 - 352 150397467 - Smed_2267 - hypothetical protein 2240 60.09 0 2345792..2346247 + 151 150397468 - Smed_2268 - dehydratase 2241 63.06 0 2346244..2346714 + 156 150397469 - Smed_2269 - dehydratase 2242 60.22 0 2346736..2347278 - 180 150397470 - Smed_2270 - adenine phosphoribosyltransferase 2243 60.22 0 2347452..2347637 + 61 150397471 - Smed_2271 - hypothetical protein 2244 64.05 0 2347670..2348929 - 419 150397472 - Smed_2272 - polynucleotide adenylyltransferase region 2245 60.66 0 2348926..2349558 - 210 150397473 - Smed_2273 - NUDIX hydrolase 2246 62.98 0 2349555..2350178 - 207 150397474 - Smed_2274 - hypothetical protein 2247 65.38 +1 2350541..2351554 + 337 150397475 - Smed_2275 - ATPase 2248 64.93 +1 2351558..2352478 + 306 150397476 - Smed_2276 - hypothetical protein 2249 65.46 +1 2352475..2355288 + 937 150397477 - Smed_2277 - hypothetical protein 2250 64.54 +1 2355299..2357368 + 689 150397478 - Smed_2278 - hypothetical protein 2251 64.43 0 2357347..2357838 + 163 150397479 - Smed_2279 - GCN5-related N-acetyltransferase 2252 65.95 +1 2357839..2358399 - 186 150397480 - Smed_2280 - GCN5-related N-acetyltransferase 2253 59.42 0 2358655..2359647 + 330 150397481 - Smed_2281 - putative glutathione S-transferase 2254 65.65 +1 2359658..2360149 - 163 150397482 - Smed_2282 - NUDIX hydrolase 2255 63.01 0 2360230..2361132 + 300 150397483 - Smed_2283 - metallophosphoesterase 2256 59.65 0 2361258..2361827 + 189 150397484 - Smed_2284 - ECF subfamily RNA polymerase sigma-24 factor 2257 62.32 0 2361831..2362658 + 275 150397485 - Smed_2285 - putative transmembrane anti-sigma factor 2258 61.11 0 2363011..2363262 - 83 150397486 - Smed_2286 - transcription factor 2259 59.56 0 2363312..2365042 - 576 150397487 - Smed_2287 - 2-isopropylmalate synthase 2260 63.51 0 2365059..2365280 - 73 150397488 - Smed_2288 - hypothetical protein 2261 59.18 0 2365456..2366043 - 195 150397489 - Smed_2289 - ATP-dependent Clp protease proteolytic subunit 2262 63.04 0 2366234..2366812 + 192 150397490 - Smed_2290 - HupE/UreJ protein 2263 60.95 0 2366812..2367318 + 168 150397491 - Smed_2291 - GCN5-related N-acetyltransferase 2264 64.11 0 2367285..2368106 - 273 150397492 - Smed_2292 - aminoglycoside phosphotransferase 2265 61.94 0 2368135..2368599 - 154 150397493 - Smed_2293 - 7-cyano-7-deazaguanine reductase 2266 63.30 0 2368596..2369516 - 306 150397494 - Smed_2294 - cation diffusion facilitator family transporter 2267 61.96 0 2369676..2371865 - 729 150397495 - Smed_2295 - anthranilate synthase 2268 61.22 0 2372143..2374347 - 734 150397496 - Smed_2296 - TonB-dependent hemoglobin/transferrin/lactoferrin family receptor 2269 63.70 0 2374629..2375471 + 280 150397497 - Smed_2297 - extensin family protein 2270 61.33 0 2375519..2377222 - 567 150397498 - Smed_2298 - formate--tetrahydrofolate ligase 61.69 MEAN 2.82 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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