version 1.0
Sinorhizobium medicae WSM419, complete genome - 1..3781904 3529 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2030 61.81 0 2108947..2109255 - 102 150397258 - Smed_2057 - branched-chain amino acid transport 2031 60.39 0 2109259..2109975 - 238 150397259 - Smed_2058 - AzlC family protein 2032 63.50 0 2110193..2111014 - 273 150397260 panB Smed_2059 - 3-methyl-2-oxobutanoate hydroxymethyltransferase 2033 62.44 0 2111017..2111892 - 291 150397261 panC Smed_2060 - pantoate--beta-alanine ligase 2034 58.77 -1 2112254..2112658 + 134 150397262 - Smed_2061 - glyoxalase/bleomycin resistance protein/dioxygenase 2035 56.36 -1 2112943..2113854 + 303 150397263 - Smed_2062 - binding-protein-dependent transport systems inner membrane component 2036 59.64 0 2113851..2114732 + 293 150397264 - Smed_2063 - binding-protein-dependent transport systems inner membrane component 2037 61.11 0 2114764..2116113 + 449 150397265 - Smed_2064 - extracellular solute-binding protein 2038 60.47 0 2116263..2117891 + 542 150397266 - Smed_2065 - sulfatase 2039 58.95 0 2117962..2119011 + 349 150397267 - Smed_2066 - ABC transporter related 2040 59.70 0 2118992..2119393 + 133 150397268 - Smed_2067 - RpiR family transcriptional regulator 2041 56.64 -1 2119512..2120987 - 491 150397269 - Smed_2068 - sulfatase 2042 56.88 -1 2121042..2122022 + 326 150397270 - Smed_2069 - LysR family transcriptional regulator 2043 63.56 0 2122076..2124229 - 717 150397271 ligA Smed_2070 - NAD-dependent DNA ligase LigA 2044 64.46 0 2124395..2126068 - 557 150397272 - Smed_2071 - DNA repair protein RecN 2045 58.59 -1 2126104..2126970 - 288 150397273 - Smed_2072 - hypothetical protein 2046 59.96 0 2127249..2128202 - 317 150397274 lpxC Smed_2073 - UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2047 65.43 +1 2128628..2130400 - 590 150397275 - Smed_2074 - cell division protein FtsZ 2048 64.79 +1 2130495..2131823 - 442 150397276 - Smed_2075 - cell division protein FtsA 2049 63.55 0 2131820..2132749 - 309 150397277 - Smed_2076 - cell division protein FtsQ 2050 59.44 0 2132737..2133663 - 308 150397278 ddl Smed_2077 - D-alanine--D-alanine ligase 2051 64.05 0 2133977..2134663 - 228 150397279 - Smed_2078 - aquaporin Z 2052 62.93 0 2135064..2136374 + 436 150397280 - Smed_2079 - major facilitator superfamily metabolite/H(+) symporter 2053 60.82 0 2136445..2137419 - 324 150397281 murB Smed_2080 - UDP-N-acetylenolpyruvoylglucosamine reductase 2054 60.88 0 2137416..2138831 - 471 150397282 murC Smed_2081 - UDP-N-acetylmuramate--L-alanine ligase 2055 64.27 0 2138828..2139952 - 374 150397283 murG Smed_2082 - N-acetylglucosaminyl transferase 2056 61.56 0 2139970..2141124 - 384 150397284 - Smed_2083 - cell division protein FtsW 2057 64.08 0 2141181..2142572 - 463 150397285 murD Smed_2084 - UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 2058 59.95 0 2142578..2143678 - 366 150397286 mraY Smed_2085 - phospho-N-acetylmuramoyl-pentapeptide-transferase 2059 63.46 0 2143909..2145342 - 477 150397287 - Smed_2086 - UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase 2060 64.89 +1 2145344..2146804 - 486 150397288 murE Smed_2087 - UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase 2061 61.46 0 2146974..2148722 - 582 150397289 - Smed_2088 - peptidoglycan glycosyltransferase 2062 59.90 0 2148722..2149120 - 132 150397290 - Smed_2089 - hypothetical protein 2063 62.17 0 2149127..2150215 - 362 150397291 mraW Smed_2090 - S-adenosyl-methyltransferase MraW 2064 61.90 0 2150269..2150709 - 146 150397292 - Smed_2091 - cell division protein MraZ 2065 61.32 0 2151601..2152929 - 442 150397293 - Smed_2092 - D-serine dehydratase 2066 64.51 0 2152980..2154230 - 416 150397294 - Smed_2093 - D-amino acid dehydrogenase small subunit 2067 59.75 0 2154290..2155186 - 298 150397295 purU Smed_2094 - formyltetrahydrofolate deformylase 2068 62.64 0 2155208..2156101 - 297 150397296 - Smed_2095 - methenyltetrahydrofolate cyclohydrolase 2069 61.42 0 2156225..2157502 - 425 150397297 - Smed_2096 - glycine hydroxymethyltransferase 2070 60.48 0 2157638..2158558 + 306 150397298 - Smed_2097 - LysR family transcriptional regulator 2071 59.69 0 2158833..2159864 + 343 150397299 - Smed_2098 - extracellular solute-binding protein 2072 60.38 0 2159934..2161142 + 402 150397300 - Smed_2099 - binding-protein-dependent transport systems inner membrane component 2073 61.27 0 2161142..2162272 + 376 150397301 - Smed_2100 - polar amino acid ABC transporter, inner membrane subunit 2074 58.50 -1 2162302..2163060 + 252 150397302 - Smed_2101 - ABC transporter related 2075 64.73 +1 2163188..2164375 - 395 150397303 - Smed_2102 - FAD dependent oxidoreductase 2076 56.67 -1 2164510..2165049 - 179 150397304 - Smed_2103 - lytic transglycosylase catalytic 2077 61.05 0 2165276..2166040 - 254 150397305 - Smed_2104 - N-acetylmuramoyl-L-alanine amidase 2078 59.32 0 2166037..2166744 - 235 150397306 - Smed_2105 - heat shock protein DnaJ domain-containing protein 2079 62.30 0 2167101..2168315 + 404 150397307 - Smed_2106 - pyrophosphate--fructose-6-phosphate 1-phosphotransferase 2080 61.77 0 2168451..2169083 + 210 150397308 - Smed_2107 - lysine exporter protein LysE/YggA 2081 61.78 0 2169202..2170203 + 333 150397309 - Smed_2108 - lytic transglycosylase catalytic 2082 63.22 0 2170245..2171606 - 453 150397310 - Smed_2109 - beta-lactamase 2083 61.92 0 2171811..2173073 + 420 150397311 - Smed_2110 - hypothetical protein 2084 62.37 0 2173070..2173744 + 224 150397312 - Smed_2111 - methyltransferase type 11 2085 59.54 0 2173945..2174730 + 261 150397313 - Smed_2112 - glycoside hydrolase family protein 2086 64.45 0 2174863..2176080 + 405 150397314 - Smed_2113 - lytic murein transglycosylase 2087 63.07 0 2176299..2177243 + 314 150397315 - Smed_2114 - hypothetical protein 2088 62.10 0 2177773..2178714 - 313 150397316 - Smed_2115 - 5,10-methylenetetrahydrofolate reductase 2089 63.54 0 2178717..2179739 - 340 150397317 - Smed_2116 - methyltransferase type 11 2090 61.39 0 2180219..2181868 - 549 150397318 - Smed_2117 - putative ABC transporter ATP-binding protein 2091 62.26 0 2181993..2182763 - 256 150397319 - Smed_2118 - putative ribonuclease protein 2092 64.23 0 2182964..2183908 + 314 150397320 - Smed_2119 - hypothetical protein 2093 61.22 0 2183905..2184858 + 317 150397321 - Smed_2120 - hypothetical protein 2094 65.63 +1 2184895..2186541 + 548 150397322 - Smed_2121 - acetolactate synthase 2 catalytic subunit 2095 59.91 0 2186879..2187811 + 310 150397323 - Smed_2122 - transposase IS116/IS110/IS902 family protein 2096 63.42 0 2187984..2188322 - 112 150397324 - Smed_2123 - hypothetical protein 2097 65.70 +1 2188394..2189323 - 309 150397325 - Smed_2124 - hypothetical protein 2098 62.50 0 2189393..2190784 + 463 150397326 - Smed_2125 - ErfK/YbiS/YcfS/YnhG family protein 2099 64.81 +1 2190938..2192227 + 429 150397327 - Smed_2126 - FAD dependent oxidoreductase 2100 63.74 0 2192252..2192968 - 238 150397328 - Smed_2127 - cobyrinic acid ac-diamide synthase 2101 64.14 0 2193177..2194322 - 381 150397329 - Smed_2128 - iron-containing alcohol dehydrogenase 2102 62.70 0 2194319..2195704 - 461 150397330 - Smed_2129 - aldehyde dehydrogenase 2103 60.73 0 2195785..2197149 - 454 150397331 - Smed_2130 - glutamine synthetase catalytic region 2104 60.40 0 2197238..2198785 - 515 150397332 - Smed_2131 - amino acid permease-associated region 2105 60.72 0 2198892..2199665 - 257 150397333 - Smed_2132 - N-formylglutamate amidohydrolase 2106 61.21 0 2199873..2200751 + 292 150397334 - Smed_2133 - RpiR family transcriptional regulator 2107 63.01 0 2200942..2202036 + 364 150397335 - Smed_2134 - extracellular solute-binding protein 2108 59.75 0 2202112..2202993 + 293 150397336 - Smed_2135 - binding-protein-dependent transport systems inner membrane component 2109 59.32 0 2202990..2203778 + 262 150397337 - Smed_2136 - binding-protein-dependent transport systems inner membrane component 2110 60.64 0 2203783..2204844 + 353 150397338 - Smed_2137 - ABC transporter related 2111 60.61 0 2205159..2205686 + 175 150397339 - Smed_2138 - riboflavin synthase subunit beta 2112 61.69 0 2205851..2206735 + 294 150397340 - Smed_2139 - helix-turn-helix domain-containing protein 2113 59.38 0 2206897..2209119 + 740 150397341 - Smed_2140 - TonB-dependent siderophore receptor 2114 61.46 0 2209241..2210374 + 377 150397342 - Smed_2141 - peptidase M24 2115 58.74 -1 2210400..2211497 - 365 150397343 - Smed_2142 - ABC transporter related 2116 58.55 -1 2211507..2213453 - 648 150397344 - Smed_2143 - hypothetical protein 2117 56.98 -1 2213481..2214347 - 288 150397345 - Smed_2144 - binding-protein-dependent transport systems inner membrane component 2118 61.16 0 2214344..2215432 - 362 150397346 - Smed_2145 - binding-protein-dependent transport systems inner membrane component 2119 57.99 -1 2215395..2216639 - 414 150397347 - Smed_2146 - extracellular solute-binding protein 2120 58.36 -1 2216810..2217832 + 340 150397348 - Smed_2147 - periplasmic binding protein/LacI transcriptional regulator 2121 61.27 0 2217863..2218510 + 215 150397349 - Smed_2148 - hypothetical protein 2122 61.19 0 2218647..2219084 - 145 150397350 - Smed_2149 - ribose-5-phosphate isomerase B 2123 63.80 0 2219125..2219892 - 255 150397351 tpiA Smed_2150 - triosephosphate isomerase 2124 60.69 0 2219889..2220674 - 261 150397352 - Smed_2151 - DeoR family transcriptional regulator 2125 59.89 0 2220779..2221708 - 309 150397353 - Smed_2152 - xylose isomerase domain-containing protein 2126 63.48 0 2221722..2222567 - 281 150397354 - Smed_2153 - HAD family hydrolase 2127 67.29 +1 2222564..2223847 - 427 150397355 - Smed_2154 - carbohydrate kinase FGGY 2128 64.30 0 2223844..2224899 - 351 150397356 - Smed_2155 - class II aldolase/adducin family protein 2129 63.00 0 2224913..2226466 - 517 150397357 - Smed_2156 - glycerol-3-phosphate dehydrogenase 61.69 MEAN 2.82 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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