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Sinorhizobium medicae WSM419, complete genome - 1..3781904 3529 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1969 63.36 0 2048687..2049775 + 362 150397197 - Smed_1995 - putative ammonia monooxygenase 1970 61.33 0 2049948..2050322 + 124 150397198 - Smed_1996 - hypothetical protein 1971 61.98 0 2050306..2050860 + 184 150397199 - Smed_1997 - ECF subfamily RNA polymerase sigma-24 factor 1972 63.46 0 2050857..2051666 + 269 150397200 - Smed_1998 - putative transmembrane anti-sigma factor 1973 65.00 +1 2052047..2052706 - 219 150397201 - Smed_2000 - nitrile hydratase 1974 63.24 0 2052703..2053344 - 213 150397202 - Smed_2001 - nitrile hydratase, alpha subunit 1975 60.77 0 2053427..2054020 - 197 150397203 - Smed_2002 - lysine exporter protein LysE/YggA 1976 61.63 0 2054300..2055034 + 244 150397204 - Smed_2003 - methyltransferase type 11 1977 56.89 -1 2055060..2055284 - 74 150397205 - Smed_2004 - hypothetical protein 1978 60.95 0 2055442..2055651 - 69 150397206 - Smed_2005 - cold-shock DNA-binding domain-containing protein 1979 64.30 0 2055970..2056815 + 281 150397207 - Smed_2006 - aldo/keto reductase 1980 61.43 0 2056900..2057472 - 190 150397208 ilvH Smed_2007 - acetolactate synthase 3 regulatory subunit 1981 61.21 0 2057495..2059273 - 592 150397209 - Smed_2008 - acetolactate synthase 3 catalytic subunit 1982 61.79 0 2059571..2061559 + 662 150397210 - Smed_2009 - hypothetical protein 1983 61.71 0 2061670..2062032 + 120 150397211 - Smed_2010 - hypothetical protein 1984 63.62 0 2062086..2063003 - 305 150397212 miaA Smed_2011 - tRNA delta(2)-isopentenylpyrophosphate transferase 1985 62.50 0 2063005..2063892 + 295 150397213 - Smed_2012 - phosphoserine phosphatase SerB 1986 60.76 0 2063889..2064464 + 191 150397214 - Smed_2013 - GCN5-related N-acetyltransferase 1987 61.37 0 2064642..2066150 - 502 150397215 - Smed_2014 - protease Do 1988 59.95 0 2066358..2066744 - 128 150397216 - Smed_2015 - amino acid-binding ACT domain-containing protein 1989 54.30 -2 2066751..2066936 - 61 150397217 - Smed_2016 - hypothetical protein 1990 60.45 0 2066944..2067876 - 310 150397218 - Smed_2017 - HflC protein 1991 61.43 0 2067873..2068961 - 362 150397219 - Smed_2018 - HflK protein 1992 64.89 +1 2069156..2069719 - 187 150397220 - Smed_2019 - dihydrofolate reductase 1993 61.88 0 2069712..2070317 - 201 150397221 - Smed_2020 - glutathione S-transferase domain-containing protein 1994 57.61 -1 2070435..2071229 - 264 150397222 thyA Smed_2021 - thymidylate synthase 1995 59.82 0 2071333..2071551 - 72 150397223 - Smed_2022 - hypothetical protein 1996 58.85 -1 2071601..2071843 - 80 150397224 - Smed_2023 - hypothetical protein 1997 60.87 0 2071854..2072060 - 68 150397225 - Smed_2024 - hypothetical protein 1998 61.22 0 2072252..2072563 - 103 150397226 - Smed_2025 - hypothetical protein 1999 56.63 -1 2072580..2072888 - 102 150397227 - Smed_2026 - hypothetical protein 2000 58.14 -1 2073606..2074121 + 171 150397228 - Smed_2027 - hypothetical protein 2001 61.57 0 2074161..2074376 + 71 150397229 - Smed_2028 - hypothetical protein 2002 60.39 0 2074447..2074701 + 84 150397230 - Smed_2029 - hypothetical protein 2003 64.50 0 2074733..2078473 - 1246 150397231 - Smed_2030 - hypothetical protein 2004 61.93 0 2078538..2080016 - 492 150397232 - Smed_2031 - D-lactate dehydrogenase (cytochrome) 2005 63.45 0 2080474..2080908 + 144 150397233 - Smed_2032 - hypothetical protein 2006 62.87 0 2080945..2084079 - 1044 150397234 - Smed_2033 - acriflavin resistance protein 2007 65.10 +1 2084076..2085287 - 403 150397235 - Smed_2034 - RND family efflux transporter MFP subunit 2008 64.36 0 2085609..2086430 + 273 150397236 - Smed_2035 - cyclase family protein 2009 59.03 0 2086450..2086881 + 143 150397237 - Smed_2036 - alkylhydroperoxidase 2010 63.34 0 2086986..2089538 + 850 150397238 - Smed_2037 - UvrD/REP helicase 2011 60.72 0 2089642..2090751 - 369 150397239 - Smed_2038 - oxidoreductase domain-containing protein 2012 64.84 +1 2091126..2092163 + 345 150397240 - Smed_2039 - regulatory protein LacI 2013 63.70 0 2092186..2093262 + 358 150397241 - Smed_2040 - hypothetical protein 2014 58.20 -1 2093525..2094469 + 314 150397242 - Smed_2041 - ABC transporter binding protein 2015 58.66 -1 2094538..2095524 + 328 150397243 - Smed_2042 - monosaccharide-transporting ATPase 2016 59.51 0 2095527..2096294 + 255 150397244 - Smed_2043 - ABC transporter related 2017 59.52 0 2096440..2096901 - 153 150397245 - Smed_2044 - GCN5-related N-acetyltransferase 2018 63.24 0 2096979..2097650 - 223 150397246 - Smed_2045 - phosphoribosyltransferase 2019 63.10 0 2097741..2099057 + 438 150397247 - Smed_2046 - diguanylate cyclase 2020 57.43 -1 2099167..2099664 + 165 150397248 - Smed_2047 - CreA family protein 2021 58.06 -1 2099865..2100224 - 119 150397249 - Smed_2048 - putative signal peptide protein 2022 60.90 0 2100466..2100864 - 132 150397250 - Smed_2049 - putative signal peptide protein 2023 59.35 0 2101188..2101652 - 154 150397251 - Smed_2050 - putative CheW protein 2024 63.32 0 2101655..2103808 - 717 150397252 - Smed_2051 - methyl-accepting chemotaxis sensory transducer 2025 59.75 0 2103990..2104148 + 52 150397253 - Smed_2052 - putative signal peptide protein 2026 57.83 -1 2104296..2104895 + 199 150397254 - Smed_2053 - electron transport protein SCO1/SenC 2027 61.52 0 2105039..2105932 + 297 150397255 prmA Smed_2054 - ribosomal protein L11 methyltransferase 2028 64.54 +1 2106475..2108310 + 611 150397256 - Smed_2055 - peptidase M24 2029 60.00 0 2108593..2108832 - 79 150397257 - Smed_2056 - putative signal peptide protein 2030 61.81 0 2108947..2109255 - 102 150397258 - Smed_2057 - branched-chain amino acid transport 2031 60.39 0 2109259..2109975 - 238 150397259 - Smed_2058 - AzlC family protein 2032 63.50 0 2110193..2111014 - 273 150397260 panB Smed_2059 - 3-methyl-2-oxobutanoate hydroxymethyltransferase 2033 62.44 0 2111017..2111892 - 291 150397261 panC Smed_2060 - pantoate--beta-alanine ligase 2034 58.77 -1 2112254..2112658 + 134 150397262 - Smed_2061 - glyoxalase/bleomycin resistance protein/dioxygenase 2035 56.36 -1 2112943..2113854 + 303 150397263 - Smed_2062 - binding-protein-dependent transport systems inner membrane component 2036 59.64 0 2113851..2114732 + 293 150397264 - Smed_2063 - binding-protein-dependent transport systems inner membrane component 2037 61.11 0 2114764..2116113 + 449 150397265 - Smed_2064 - extracellular solute-binding protein 2038 60.47 0 2116263..2117891 + 542 150397266 - Smed_2065 - sulfatase 2039 58.95 0 2117962..2119011 + 349 150397267 - Smed_2066 - ABC transporter related 2040 59.70 0 2118992..2119393 + 133 150397268 - Smed_2067 - RpiR family transcriptional regulator 2041 56.64 -1 2119512..2120987 - 491 150397269 - Smed_2068 - sulfatase 2042 56.88 -1 2121042..2122022 + 326 150397270 - Smed_2069 - LysR family transcriptional regulator 2043 63.56 0 2122076..2124229 - 717 150397271 ligA Smed_2070 - NAD-dependent DNA ligase LigA 2044 64.46 0 2124395..2126068 - 557 150397272 - Smed_2071 - DNA repair protein RecN 2045 58.59 -1 2126104..2126970 - 288 150397273 - Smed_2072 - hypothetical protein 2046 59.96 0 2127249..2128202 - 317 150397274 lpxC Smed_2073 - UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2047 65.43 +1 2128628..2130400 - 590 150397275 - Smed_2074 - cell division protein FtsZ 2048 64.79 +1 2130495..2131823 - 442 150397276 - Smed_2075 - cell division protein FtsA 2049 63.55 0 2131820..2132749 - 309 150397277 - Smed_2076 - cell division protein FtsQ 2050 59.44 0 2132737..2133663 - 308 150397278 ddl Smed_2077 - D-alanine--D-alanine ligase 2051 64.05 0 2133977..2134663 - 228 150397279 - Smed_2078 - aquaporin Z 2052 62.93 0 2135064..2136374 + 436 150397280 - Smed_2079 - major facilitator superfamily metabolite/H(+) symporter 2053 60.82 0 2136445..2137419 - 324 150397281 murB Smed_2080 - UDP-N-acetylenolpyruvoylglucosamine reductase 2054 60.88 0 2137416..2138831 - 471 150397282 murC Smed_2081 - UDP-N-acetylmuramate--L-alanine ligase 2055 64.27 0 2138828..2139952 - 374 150397283 murG Smed_2082 - N-acetylglucosaminyl transferase 2056 61.56 0 2139970..2141124 - 384 150397284 - Smed_2083 - cell division protein FtsW 2057 64.08 0 2141181..2142572 - 463 150397285 murD Smed_2084 - UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 2058 59.95 0 2142578..2143678 - 366 150397286 mraY Smed_2085 - phospho-N-acetylmuramoyl-pentapeptide-transferase 2059 63.46 0 2143909..2145342 - 477 150397287 - Smed_2086 - UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase 2060 64.89 +1 2145344..2146804 - 486 150397288 murE Smed_2087 - UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase 2061 61.46 0 2146974..2148722 - 582 150397289 - Smed_2088 - peptidoglycan glycosyltransferase 2062 59.90 0 2148722..2149120 - 132 150397290 - Smed_2089 - hypothetical protein 2063 62.17 0 2149127..2150215 - 362 150397291 mraW Smed_2090 - S-adenosyl-methyltransferase MraW 2064 61.90 0 2150269..2150709 - 146 150397292 - Smed_2091 - cell division protein MraZ 2065 61.32 0 2151601..2152929 - 442 150397293 - Smed_2092 - D-serine dehydratase 2066 64.51 0 2152980..2154230 - 416 150397294 - Smed_2093 - D-amino acid dehydrogenase small subunit 2067 59.75 0 2154290..2155186 - 298 150397295 purU Smed_2094 - formyltetrahydrofolate deformylase 2068 62.64 0 2155208..2156101 - 297 150397296 - Smed_2095 - methenyltetrahydrofolate cyclohydrolase 61.69 MEAN 2.82 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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