version 1.0
Sinorhizobium medicae WSM419, complete genome - 1..3781904 3529 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1698 62.47 0 1802441..1803202 - 253 150396926 - Smed_1723 - xylose isomerase domain-containing protein 1699 61.90 0 1803252..1805726 - 824 150396927 - Smed_1724 - Beta-mannosidase 1700 60.31 0 1805817..1806902 - 361 150396928 - Smed_1725 - ABC transporter related 1701 59.55 0 1806909..1807850 - 313 150396929 - Smed_1726 - binding-protein-dependent transport systems inner membrane component 1702 58.31 -1 1807843..1808751 - 302 150396930 - Smed_1727 - binding-protein-dependent transport systems inner membrane component 1703 61.73 0 1808944..1810179 - 411 150396931 - Smed_1728 - extracellular solute-binding protein 1704 50.98 -2 1810284..1810538 + 84 150396932 - Smed_1729 - hypothetical protein 1705 61.68 0 1810668..1811729 + 353 150396933 - Smed_1730 - periplasmic binding protein/LacI transcriptional regulator 1706 59.47 0 1811793..1812056 - 87 150396934 - Smed_1731 - hypothetical protein 1707 62.61 0 1812163..1813593 - 476 150396935 - Smed_1732 - 6-phosphogluconate dehydrogenase 1708 64.60 +1 1813960..1814877 + 305 150396936 - Smed_1733 - helix-turn-helix domain-containing protein 1709 59.73 0 1814996..1815442 + 148 150396937 - Smed_1734 - hypothetical protein 1710 59.89 0 1815423..1815776 + 117 150396938 - Smed_1735 - glyoxalase/bleomycin resistance protein/dioxygenase 1711 61.58 0 1816048..1816971 - 307 150396939 - Smed_1736 - lipid A biosynthesis lauroyl acyltransferase 1712 63.75 0 1816982..1818010 - 342 150396940 - Smed_1737 - alcohol dehydrogenase 1713 63.63 0 1818054..1819337 - 427 150396941 - Smed_1738 - 3-oxoacyl-(acyl carrier protein) synthase II 1714 63.76 0 1819350..1820552 - 400 150396942 - Smed_1739 - 3-oxoacyl-(acyl carrier protein) synthase II 1715 60.59 0 1820555..1821031 - 158 150396943 - Smed_1740 - Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ 1716 52.08 -2 1821248..1821535 - 95 150396944 - Smed_1741 - acyl carrier protein 1717 61.18 0 1822067..1822795 + 242 150396945 - Smed_1742 - CRP/FNR family transcriptional regulator 1718 61.43 0 1822851..1823804 - 317 150396946 - Smed_1743 - cobalamin biosynthesis protein CobD 1719 63.67 0 1823835..1824836 - 333 150396947 - Smed_1744 - aminotransferase class I and II 1720 64.96 +1 1824839..1826128 - 429 150396948 - Smed_1745 - cobyrinic acid a,c-diamide synthase 1721 62.62 0 1826125..1826964 - 279 150396949 - Smed_1746 - uroporphyrin-III C-methyltransferase 1722 65.07 +1 1827095..1827532 - 145 150396950 - Smed_1747 - putative cobalamin biosynthesis protein 1723 61.20 0 1827860..1828645 + 261 150396951 - Smed_1748 - hypothetical protein 1724 61.50 0 1828694..1830493 - 599 150396952 - Smed_1749 - ABC transporter related 1725 61.59 0 1830537..1831481 - 314 150396953 - Smed_1750 - acetamidase/formamidase 1726 59.55 0 1831471..1833087 - 538 150396954 - Smed_1751 - extracellular solute-binding protein 1727 61.13 0 1833128..1834048 - 306 150396955 - Smed_1752 - binding-protein-dependent transport systems inner membrane component 1728 62.16 0 1834048..1834890 - 280 150396956 - Smed_1753 - binding-protein-dependent transport systems inner membrane component 1729 63.90 0 1834925..1835539 - 204 150396957 - Smed_1754 - response regulator receiver/ANTAR domain-containing protein 1730 61.18 0 1835536..1836702 - 388 150396958 - Smed_1755 - putative regulator protein 1731 62.07 0 1836977..1837150 + 57 150396959 - Smed_1756 - hypothetical protein 1732 61.74 0 1837198..1837623 - 141 150396960 - Smed_1757 - hypothetical protein 1733 58.29 -1 1837623..1838267 - 214 150396961 - Smed_1758 - cob(I)yrinic acid a,c-diamide adenosyltransferase 1734 63.66 0 1838278..1842099 - 1273 150396962 cobN Smed_1759 - cobaltochelatase 1735 60.66 0 1842139..1843203 - 354 150396963 - Smed_1760 - cobalamin biosynthesis protein CobW 1736 62.12 0 1843207..1843734 - 175 150396964 cobU Smed_1761 - adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase 1737 61.13 0 1844498..1845382 + 294 150396965 - Smed_1762 - hypothetical protein 1738 62.35 0 1845410..1847587 - 725 150396966 - Smed_1763 - putative Chase2 sensor protein 1739 61.64 0 1847812..1848627 - 271 150396967 - Smed_1764 - alpha/beta hydrolase fold 1740 63.37 0 1848719..1850173 - 484 150396968 - Smed_1765 - cobyric acid synthase 1741 61.81 0 1850419..1850562 + 47 150396969 - Smed_1766 - hypothetical protein 1742 60.16 0 1851013..1852011 + 332 150396970 - Smed_1767 - substrate-binding region of ABC-type glycine betaine transport system 1743 59.03 0 1852183..1853229 + 348 150396971 - Smed_1768 - glycine betaine/L-proline ABC transporter, ATPase subunit 1744 55.39 -2 1853294..1853701 - 135 150396972 - Smed_1769 - 4-oxalocrotonate tautomerase 1745 64.74 +1 1853804..1854685 + 293 150396973 - Smed_1770 - LysR family transcriptional regulator 1746 62.92 0 1854761..1855774 + 337 150396974 - Smed_1771 - methionine synthase I 1747 60.53 0 1855817..1857868 - 683 150396975 - Smed_1772 - acyltransferase 3 1748 61.75 0 1858023..1858775 - 250 150396976 - Smed_1773 - lipoprotein signal peptide 1749 65.25 +1 1858856..1859560 - 234 150396977 - Smed_1774 - hypothetical protein 1750 62.53 0 1859668..1861239 - 523 150396978 - Smed_1775 - trimethylamine methyltransferase 1751 57.80 -1 1861761..1862459 + 232 150396979 - Smed_1776 - methionine synthase 1752 59.74 0 1862764..1863384 + 206 150396980 - Smed_1777 - hypothetical protein 1753 64.05 0 1863405..1863557 - 50 150396981 - Smed_1778 - entericidin EcnAB 1754 66.11 +1 1863804..1863983 + 59 150396982 - Smed_1779 - lipoprotein transmembrane 1755 63.69 0 1864052..1864522 - 156 150396983 - Smed_1780 - BA14K family protein 1756 64.03 0 1864921..1865223 + 100 150396984 - Smed_1781 - hypothetical protein 1757 62.24 0 1865216..1865803 + 195 150396985 - Smed_1782 - hypothetical protein 1758 62.41 0 1865800..1866903 + 367 150396986 - Smed_1783 - methylenetetrahydrofolate reductase 1759 64.69 +1 1867049..1868008 + 319 150396987 - Smed_1784 - methyltetrahydrofolate:corrinoid/iron-sulfur protein methyltransferase 1760 64.01 0 1868010..1868348 + 112 150396988 - Smed_1785 - hypothetical protein 1761 60.38 0 1868368..1870419 + 683 150396989 - Smed_1786 - ferredoxin 1762 64.10 0 1870513..1871175 + 220 150396990 - Smed_1787 - chloramphenicol phosphotransferase family protein 1763 61.76 0 1871206..1872102 - 298 150396991 - Smed_1788 - LysR family transcriptional regulator 1764 59.20 0 1872678..1872878 + 66 150396992 - Smed_1789 - hypothetical protein 1765 59.14 0 1872998..1873861 - 287 150396993 - Smed_1790 - alpha/beta hydrolase fold 1766 61.67 0 1874077..1874676 + 199 150396994 - Smed_1791 - hypothetical protein 1767 61.32 0 1874699..1875670 - 323 150396995 - Smed_1792 - cation diffusion facilitator family transporter 1768 58.97 0 1875667..1875939 - 90 150396996 - Smed_1793 - hypothetical protein 1769 60.18 0 1876418..1877434 + 338 150396997 - Smed_1794 - AraC family transcriptional regulator 1770 56.24 -1 1877988..1878812 - 274 150396998 - Smed_1795 - response regulator receiver protein 1771 59.98 0 1878987..1880600 - 537 150396999 - Smed_1796 - hemolysin-type calcium-binding region 1772 58.94 0 1880912..1881571 + 219 150397000 - Smed_1797 - deaminase-reductase domain-containing protein 1773 59.85 0 1881683..1881946 - 87 150397001 - Smed_1798 - putative signal peptide protein 1774 61.19 0 1882263..1882901 + 212 150397002 - Smed_1799 - integral membrane protein TerC 1775 60.62 0 1883047..1885626 - 859 150397003 - Smed_1800 - MscS mechanosensitive ion channel 1776 58.44 -1 1885756..1886217 - 153 150397004 - Smed_1801 - glutathione-dependent formaldehyde-activating GFA 1777 59.04 0 1886411..1886974 - 187 150397005 - Smed_1802 - hypothetical protein 1778 62.73 0 1887117..1888892 - 591 150397006 - Smed_1803 - TrkA domain-containing protein 1779 58.87 0 1889425..1889706 + 93 150397007 - Smed_1804 - putative transmembrane protein 1780 63.86 0 1889744..1890028 + 94 150397008 - Smed_1805 - putative transmembrane protein 1781 62.24 0 1890139..1890477 - 112 150397009 - Smed_1806 - hypothetical protein 1782 62.93 0 1890470..1890763 - 97 150397010 - Smed_1807 - hypothetical protein 1783 64.81 +1 1890841..1891650 - 269 150397011 - Smed_1808 - putative transmembrane protein 1784 49.72 -2 1892013..1892714 - 233 150397012 - Smed_1809 - FkbM family methyltransferase 1785 58.51 -1 1892794..1893345 - 183 150397013 - Smed_1810 - hypothetical protein 1786 53.09 -2 1893332..1893493 - 53 150397014 - Smed_1811 - hypothetical protein 1787 55.28 -2 1893940..1894554 + 204 150397015 - Smed_1812 - hypothetical protein 1788 55.04 -2 1894543..1895058 - 171 150397016 - Smed_1813 - hypothetical protein 1789 60.73 0 1895059..1896558 - 499 150397017 - Smed_1814 - hypothetical protein 1790 67.21 +1 1896639..1897745 - 368 150397018 - Smed_1815 - hypothetical protein 1791 65.54 +1 1897745..1898098 - 117 150397019 - Smed_1816 - hypothetical protein 1792 61.10 0 1898095..1899693 - 532 150397020 - Smed_1817 - hypothetical protein 1793 62.12 0 1899697..1900158 - 153 150397021 - Smed_1818 - hypothetical protein 1794 63.57 0 1900158..1901774 - 538 150397022 - Smed_1819 - hypothetical protein 1795 63.18 0 1901771..1902373 - 200 150397023 - Smed_1820 - hypothetical protein 1796 60.35 0 1902370..1903731 - 453 150397024 - Smed_1821 - hypothetical protein 1797 64.01 0 1903728..1904330 - 200 150397025 - Smed_1822 - hypothetical protein 61.69 MEAN 2.82 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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