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Sinorhizobium medicae WSM419, complete genome - 1..3781904 3529 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1484 62.65 0 1582340..1583011 + 223 150396712 - Smed_1500 - phosphoribosylformylglycinamidine synthase subunit I 1485 67.65 +2 1583137..1583544 + 135 150396713 - Smed_1501 - hypothetical protein 1486 59.26 0 1583644..1583886 - 80 150396714 - Smed_1502 - hypothetical protein 1487 63.78 0 1583967..1585385 + 472 150396715 - Smed_1503 - GntR family transcriptional regulator 1488 60.20 0 1585481..1586068 + 195 150396716 - Smed_1504 - hypothetical protein 1489 62.77 0 1586239..1588470 + 743 150396717 - Smed_1505 - phosphoribosylformylglycinamidine synthase II 1490 60.68 0 1588595..1588828 + 77 150396718 - Smed_1506 - BolA family protein 1491 59.26 0 1588834..1589076 + 80 150396719 - Smed_1507 - hypothetical protein 1492 57.44 -1 1589239..1589574 + 111 150396720 - Smed_1508 - glutaredoxin-like protein 1493 59.97 0 1589918..1591156 + 412 150396721 - Smed_1509 - Bcr/CflA subfamily drug resistance transporter 1494 60.43 0 1591199..1592512 + 437 150396722 - Smed_1510 - major facilitator transporter 1495 62.91 0 1592570..1593394 - 274 150396723 - Smed_1511 - inositol monophosphatase 1496 59.18 0 1593397..1594278 - 293 150396724 - Smed_1512 - PP-loop domain-containing protein 1497 60.86 0 1594420..1595367 - 315 150396725 - Smed_1513 - glutaminase 1498 59.22 0 1595463..1596080 - 205 150396726 rpsD Smed_1514 - 30S ribosomal protein S4 1499 64.62 +1 1596333..1597847 - 504 150396727 - Smed_1515 - AAA ATPase 1500 62.13 0 1597976..1598791 - 271 150396728 - Smed_1516 - glutamate racemase 1501 61.49 0 1598778..1599608 - 276 150396729 - Smed_1517 - RNA methyltransferase 1502 62.52 0 1599659..1601659 - 666 150396730 - Smed_1518 - hypothetical protein 1503 60.00 0 1601963..1603177 + 404 150396731 - Smed_1519 - isocitrate dehydrogenase 1504 63.44 0 1604020..1606683 - 887 150396732 alaS Smed_1521 - alanyl-tRNA synthetase 1505 59.02 0 1606902..1607987 - 361 150396733 recA Smed_1522 - recombinase A 1506 62.69 0 1609421..1610350 + 309 150396734 - Smed_1524 - indigoidine synthase A family protein 1507 62.05 0 1610442..1613060 - 872 150396735 - Smed_1525 - multi-sensor hybrid histidine kinase 1508 66.47 +1 1613425..1614417 + 330 150396736 - Smed_1526 - putative CheA signal transduction histidine kinase 1509 58.57 -1 1614545..1614964 - 139 150396737 - Smed_1527 - TraR/DksA family transcriptional regulator 1510 63.52 0 1615370..1615909 + 179 150396738 - Smed_1528 - putative phosphohistidine phosphatase, SixA 1511 63.47 0 1616076..1617575 + 499 150396739 - Smed_1529 - protein of unknown function DUF463 YcjX family protein 1512 65.38 +1 1617572..1618657 + 361 150396740 - Smed_1530 - hypothetical protein 1513 60.69 0 1618777..1619328 + 183 150396741 - Smed_1531 - putative signal peptide protein 1514 60.57 0 1619378..1619902 - 174 150396742 - Smed_1532 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 1515 60.22 0 1619889..1620260 - 123 150396743 - Smed_1533 - dihydroneopterin aldolase 1516 62.53 0 1620257..1621126 - 289 150396744 - Smed_1534 - dihydropteroate synthase 1517 60.06 0 1621269..1621949 + 226 150396745 - Smed_1535 - hypothetical protein 1518 59.81 0 1622486..1622806 - 106 150396746 - Smed_1536 - ferredoxin 1519 60.70 0 1623096..1623464 - 122 150396747 - Smed_1537 - Hpt domain-containing protein 1520 64.43 0 1623967..1630125 + 2052 150396748 - Smed_1538 - chemotaxis sensory transducer 1521 60.34 0 1630779..1631648 - 289 150396749 - Smed_1539 - cytochrome c1 1522 58.39 -1 1631680..1632960 - 426 150396750 - Smed_1540 - cytochrome b/b6 domain-containing protein 1523 62.00 0 1632975..1633553 - 192 150396751 - Smed_1541 - ubiquinol-cytochrome c reductase, iron-sulfur subunit 1524 61.58 0 1633870..1635735 - 621 150396752 - Smed_1542 - ABC transporter related 1525 59.60 0 1635852..1637705 - 617 150396753 - Smed_1543 - ABC transporter related 1526 61.04 0 1638184..1638645 + 153 150396754 - Smed_1544 - tRNA/rRNA methyltransferase (SpoU) 1527 60.46 0 1638701..1639312 - 203 150396755 - Smed_1545 - NADPH-dependent FMN reductase 1528 62.76 0 1639352..1639837 + 161 150396756 - Smed_1546 - MerR family transcriptional regulator 1529 63.38 0 1639842..1641026 - 394 150396757 - Smed_1547 - major facilitator transporter 1530 65.90 +1 1641173..1641433 - 86 150396758 - Smed_1548 - hypothetical protein 1531 61.18 0 1641637..1642548 + 303 150396759 - Smed_1549 - coproporphyrinogen III oxidase 1532 62.72 0 1642633..1642911 + 92 150396760 - Smed_1550 - transport-associated 1533 60.98 0 1643085..1643699 - 204 150396761 - Smed_1551 - hypothetical protein 1534 57.08 -1 1643779..1645155 - 458 150396762 - Smed_1552 - hypothetical protein 1535 60.35 0 1645242..1646048 - 268 150396763 - Smed_1553 - ABC transporter related 1536 62.37 0 1646059..1647198 - 379 150396764 - Smed_1554 - hypothetical protein 1537 63.52 0 1647384..1648367 + 327 150396765 - Smed_1555 - mandelate racemase/muconate lactonizing protein 1538 60.95 0 1648319..1649542 - 407 150396766 - Smed_1556 - major facilitator transporter 1539 59.95 0 1649680..1650513 - 277 150396767 - Smed_1557 - metallophosphoesterase 1540 62.26 0 1650759..1653071 + 770 150396768 - Smed_1558 - malic enzyme 1541 59.78 0 1653276..1654016 + 246 150396769 - Smed_1559 - regulatory protein LuxR 1542 60.47 0 1654170..1654814 + 214 150396770 - Smed_1560 - autoinducer synthesis protein 1543 64.64 +1 1655000..1656133 + 377 150396771 - Smed_1561 - putative signal peptide protein 1544 61.35 0 1656248..1656943 - 231 150396772 - Smed_1562 - cob(II)yrinic acid a,c-diamide reductase 1545 62.77 0 1657242..1658063 - 273 150396773 - Smed_1563 - short chain dehydrogenase 1546 62.46 0 1658206..1659939 - 577 150396774 - Smed_1564 - ankyrin 1547 61.50 0 1660932..1662614 - 560 150396775 nadE Smed_1566 - NAD synthetase 1548 58.36 -1 1662853..1664790 + 645 150396776 - Smed_1567 - sulfatase 1549 63.03 0 1665165..1666127 + 320 150396777 - Smed_1568 - hypothetical protein 1550 60.54 0 1666193..1666600 - 135 150396778 - Smed_1569 - glutathione-dependent formaldehyde-activating GFA 1551 62.30 0 1666800..1668173 - 457 150396779 - Smed_1570 - phospho-2-dehydro-3-deoxyheptonate aldolase 1552 60.92 0 1668407..1669798 - 463 150396780 - Smed_1571 - glutathione reductase 1553 59.48 0 1669977..1670519 - 180 150396781 - Smed_1572 - hypothetical protein 1554 61.35 0 1670631..1671326 - 231 150396782 - Smed_1573 - ribose-5-phosphate isomerase A 1555 62.57 0 1671545..1672228 + 227 150396783 - Smed_1574 - phosphoglycolate phosphatase 1556 62.39 0 1672262..1674157 - 631 150396784 - Smed_1575 - hypothetical protein 1557 61.28 0 1674597..1676045 + 482 150396785 fumC Smed_1576 - fumarate hydratase 1558 62.56 0 1676091..1676699 - 202 150396786 - Smed_1577 - pyridoxamine 5'-phosphate oxidase-related FMN-binding 1559 64.27 0 1676793..1677710 - 305 150396787 - Smed_1578 - hypothetical protein 1560 59.39 0 1677725..1678246 + 173 150396788 - Smed_1579 - MarR family transcriptional regulator 1561 62.13 0 1678289..1678663 - 124 150396789 - Smed_1580 - hypothetical protein 1562 47.80 -2 1678660..1678818 - 52 150396790 - Smed_1581 - hypothetical protein 1563 60.48 0 1678822..1679871 + 349 150396791 moaA Smed_1582 - molybdenum cofactor biosynthesis protein A 1564 63.48 0 1680111..1681019 + 302 150396792 - Smed_1583 - hypothetical protein 1565 63.48 0 1681033..1681692 + 219 150396793 mobA Smed_1584 - molybdopterin-guanine dinucleotide biosynthesis protein A 1566 63.43 0 1681689..1682213 + 174 150396794 - Smed_1585 - molybdopterin-guanine dinucleotide biosynthesis protein B 1567 61.59 0 1682346..1683488 - 380 150396795 - Smed_1586 - Sel1 domain-containing protein 1568 63.66 0 1683609..1685771 - 720 150396796 - Smed_1587 - OmpA/MotB domain-containing protein 1569 58.24 -1 1686274..1687056 + 260 150396797 - Smed_1588 - extracellular solute-binding protein 1570 60.57 0 1687251..1688054 + 267 150396798 - Smed_1589 - polar amino acid ABC transporter, inner membrane subunit 1571 61.61 0 1688051..1688881 + 276 150396799 - Smed_1590 - polar amino acid ABC transporter, inner membrane subunit 1572 55.06 -2 1689052..1689318 + 88 150396800 - Smed_1591 - Usg family protein 1573 62.55 0 1689350..1690054 - 234 150396801 - Smed_1592 - short-chain dehydrogenase/reductase SDR 1574 62.15 0 1690167..1690853 - 228 150396802 - Smed_1593 - hypothetical protein 1575 61.45 0 1691161..1691985 + 274 150396803 - Smed_1594 - methyltransferase type 12 1576 61.15 0 1692037..1692906 + 289 150396804 - Smed_1595 - 6-phosphogluconate dehydrogenase NAD-binding 1577 64.38 0 1692903..1693601 + 232 150396805 - Smed_1596 - hypothetical protein 1578 57.46 -1 1693695..1694183 - 162 150396806 - Smed_1597 - AsnC family transcriptional regulator 1579 62.84 0 1694250..1694903 - 217 150396807 - Smed_1598 - uracil-DNA glycosylase superfamily protein 1580 65.14 +1 1694872..1695459 - 195 150396808 - Smed_1599 - nuclease 1581 60.61 0 1695735..1697270 + 511 150396809 - Smed_1600 - integral membrane sensor signal transduction histidine kinase 1582 60.13 0 1697549..1698481 + 310 150396810 - Smed_1601 - transposase IS116/IS110/IS902 family protein 1583 59.63 0 1698534..1699016 - 160 150396811 - Smed_1602 - diacylglycerol kinase 61.69 MEAN 2.82 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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