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Sinorhizobium medicae WSM419, complete genome - 1..3781904 3529 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1441 60.68 0 1537766..1539601 + 611 150396669 - Smed_1456 - poly(R)-hydroxyalkanoic acid synthase, class I 1442 59.44 0 1539645..1540364 + 239 150396670 - Smed_1457 - sugar fermentation stimulation protein A 1443 60.71 0 1540394..1541233 + 279 150396671 - Smed_1458 - methionine aminopeptidase 1444 61.69 0 1541230..1542012 + 260 150396672 radC Smed_1459 - DNA repair protein RadC 1445 60.50 0 1542215..1543219 - 334 150396673 - Smed_1460 - Beta-lactamase 1446 59.04 0 1543281..1544303 + 340 150396674 - Smed_1461 - LysR family transcriptional regulator 1447 60.04 0 1544468..1545976 + 502 150396675 - Smed_1462 - soluble pyridine nucleotide transhydrogenase 1448 61.07 0 1546098..1546490 - 130 150396676 - Smed_1463 - FeS assembly scaffold SufA 1449 58.53 -1 1546594..1546974 - 126 150396677 - Smed_1464 - FeS assembly SUF system protein 1450 59.66 0 1546985..1548226 - 413 150396678 - Smed_1465 - SufS subfamily cysteine desulfurase 1451 61.11 0 1548239..1549516 - 425 150396679 - Smed_1466 - FeS assembly protein SufD 1452 59.13 0 1549539..1550294 - 251 150396680 - Smed_1467 - FeS assembly ATPase SufC 1453 58.03 -1 1550403..1551872 - 489 150396681 - Smed_1468 - cysteine desulfurase activator complex subunit SufB 1454 65.01 +1 1552027..1553235 - 402 150396682 - Smed_1469 - aminotransferase class V 1455 60.03 0 1553414..1554091 + 225 150396683 - Smed_1470 - hypothetical protein 1456 62.49 0 1554179..1555375 - 398 150396684 - Smed_1471 - diguanylate cyclase 1457 60.75 0 1555466..1556614 - 382 150396685 anmK Smed_1472 - anhydro-N-acetylmuramic acid kinase 1458 60.37 0 1556778..1558031 + 417 150396686 - Smed_1473 - tyrosyl-tRNA synthetase 1459 62.86 0 1558074..1561460 - 1128 150396687 - Smed_1474 - hypothetical protein 1460 58.97 0 1561879..1562346 + 155 150396688 - Smed_1475 - alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 1461 63.65 0 1562364..1563191 + 275 150396689 - Smed_1476 - hypothetical protein 1462 61.85 0 1563333..1564661 + 442 150396690 - Smed_1477 - peptidase M23B 1463 59.67 0 1564858..1566357 + 499 150396691 - Smed_1478 - DEAD/DEAH box helicase domain-containing protein 1464 62.75 0 1566368..1566775 + 135 150396692 - Smed_1479 - NUDIX hydrolase 1465 60.38 0 1566823..1567140 - 105 150396693 - Smed_1480 - TfoX domain-containing protein 1466 65.31 +1 1567144..1568760 - 538 150396694 - Smed_1481 - 4-diphosphocytidyl-2C-methyl-D-erythritol synthase 1467 65.11 +1 1568757..1569464 - 235 150396695 - Smed_1482 - xanthine dehydrogenase accessory factor 1468 64.56 +1 1569468..1569800 - 110 150396696 - Smed_1483 - hypothetical protein 1469 63.95 0 1569857..1571146 - 429 150396697 - Smed_1484 - VWA containing CoxE family protein 1470 59.68 0 1571152..1572081 - 309 150396698 - Smed_1485 - ATPase 1471 60.88 0 1572105..1572605 - 166 150396699 - Smed_1486 - flavin reductase domain-containing protein 1472 61.71 0 1572796..1573884 + 362 150396700 - Smed_1487 - extracellular ligand-binding receptor 1473 65.97 +1 1573881..1574888 + 335 150396701 - Smed_1488 - peptidase S58 DmpA 1474 60.94 0 1575045..1575725 + 226 150396702 - Smed_1489 - ribulose-phosphate 3-epimerase 1475 61.38 0 1575722..1576477 + 251 150396703 - Smed_1490 - hypothetical protein 1476 62.90 0 1576477..1577034 + 185 150396704 - Smed_1491 - hypothetical protein 1477 59.48 0 1577099..1578406 + 435 150396705 - Smed_1492 - adenylosuccinate lyase 1478 56.86 -1 1578537..1578842 + 101 150396706 - Smed_1493 - type IV pilus assembly PilZ 1479 60.74 0 1578912..1579721 - 269 150396707 - Smed_1494 - hypothetical protein 1480 63.46 0 1579878..1580438 + 186 150396708 - Smed_1495 - hypothetical protein 1481 61.90 0 1580692..1581006 - 104 150396709 - Smed_1497 - hypothetical protein 1482 58.17 -1 1581234..1581998 + 254 150396710 - Smed_1498 - phosphoribosylaminoimidazole-succinocarboxamide synthase 1483 58.44 -1 1582017..1582259 + 80 150396711 - Smed_1499 - phosphoribosylformylglycinamidine synthase subunit PurS 1484 62.65 0 1582340..1583011 + 223 150396712 - Smed_1500 - phosphoribosylformylglycinamidine synthase subunit I 1485 67.65 +2 1583137..1583544 + 135 150396713 - Smed_1501 - hypothetical protein 1486 59.26 0 1583644..1583886 - 80 150396714 - Smed_1502 - hypothetical protein 1487 63.78 0 1583967..1585385 + 472 150396715 - Smed_1503 - GntR family transcriptional regulator 1488 60.20 0 1585481..1586068 + 195 150396716 - Smed_1504 - hypothetical protein 1489 62.77 0 1586239..1588470 + 743 150396717 - Smed_1505 - phosphoribosylformylglycinamidine synthase II 1490 60.68 0 1588595..1588828 + 77 150396718 - Smed_1506 - BolA family protein 1491 59.26 0 1588834..1589076 + 80 150396719 - Smed_1507 - hypothetical protein 1492 57.44 -1 1589239..1589574 + 111 150396720 - Smed_1508 - glutaredoxin-like protein 1493 59.97 0 1589918..1591156 + 412 150396721 - Smed_1509 - Bcr/CflA subfamily drug resistance transporter 1494 60.43 0 1591199..1592512 + 437 150396722 - Smed_1510 - major facilitator transporter 1495 62.91 0 1592570..1593394 - 274 150396723 - Smed_1511 - inositol monophosphatase 1496 59.18 0 1593397..1594278 - 293 150396724 - Smed_1512 - PP-loop domain-containing protein 1497 60.86 0 1594420..1595367 - 315 150396725 - Smed_1513 - glutaminase 1498 59.22 0 1595463..1596080 - 205 150396726 rpsD Smed_1514 - 30S ribosomal protein S4 1499 64.62 +1 1596333..1597847 - 504 150396727 - Smed_1515 - AAA ATPase 1500 62.13 0 1597976..1598791 - 271 150396728 - Smed_1516 - glutamate racemase 1501 61.49 0 1598778..1599608 - 276 150396729 - Smed_1517 - RNA methyltransferase 1502 62.52 0 1599659..1601659 - 666 150396730 - Smed_1518 - hypothetical protein 1503 60.00 0 1601963..1603177 + 404 150396731 - Smed_1519 - isocitrate dehydrogenase 1504 63.44 0 1604020..1606683 - 887 150396732 alaS Smed_1521 - alanyl-tRNA synthetase 1505 59.02 0 1606902..1607987 - 361 150396733 recA Smed_1522 - recombinase A 1506 62.69 0 1609421..1610350 + 309 150396734 - Smed_1524 - indigoidine synthase A family protein 1507 62.05 0 1610442..1613060 - 872 150396735 - Smed_1525 - multi-sensor hybrid histidine kinase 1508 66.47 +1 1613425..1614417 + 330 150396736 - Smed_1526 - putative CheA signal transduction histidine kinase 1509 58.57 -1 1614545..1614964 - 139 150396737 - Smed_1527 - TraR/DksA family transcriptional regulator 1510 63.52 0 1615370..1615909 + 179 150396738 - Smed_1528 - putative phosphohistidine phosphatase, SixA 1511 63.47 0 1616076..1617575 + 499 150396739 - Smed_1529 - protein of unknown function DUF463 YcjX family protein 1512 65.38 +1 1617572..1618657 + 361 150396740 - Smed_1530 - hypothetical protein 1513 60.69 0 1618777..1619328 + 183 150396741 - Smed_1531 - putative signal peptide protein 1514 60.57 0 1619378..1619902 - 174 150396742 - Smed_1532 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 1515 60.22 0 1619889..1620260 - 123 150396743 - Smed_1533 - dihydroneopterin aldolase 1516 62.53 0 1620257..1621126 - 289 150396744 - Smed_1534 - dihydropteroate synthase 1517 60.06 0 1621269..1621949 + 226 150396745 - Smed_1535 - hypothetical protein 1518 59.81 0 1622486..1622806 - 106 150396746 - Smed_1536 - ferredoxin 1519 60.70 0 1623096..1623464 - 122 150396747 - Smed_1537 - Hpt domain-containing protein 1520 64.43 0 1623967..1630125 + 2052 150396748 - Smed_1538 - chemotaxis sensory transducer 1521 60.34 0 1630779..1631648 - 289 150396749 - Smed_1539 - cytochrome c1 1522 58.39 -1 1631680..1632960 - 426 150396750 - Smed_1540 - cytochrome b/b6 domain-containing protein 1523 62.00 0 1632975..1633553 - 192 150396751 - Smed_1541 - ubiquinol-cytochrome c reductase, iron-sulfur subunit 1524 61.58 0 1633870..1635735 - 621 150396752 - Smed_1542 - ABC transporter related 1525 59.60 0 1635852..1637705 - 617 150396753 - Smed_1543 - ABC transporter related 1526 61.04 0 1638184..1638645 + 153 150396754 - Smed_1544 - tRNA/rRNA methyltransferase (SpoU) 1527 60.46 0 1638701..1639312 - 203 150396755 - Smed_1545 - NADPH-dependent FMN reductase 1528 62.76 0 1639352..1639837 + 161 150396756 - Smed_1546 - MerR family transcriptional regulator 1529 63.38 0 1639842..1641026 - 394 150396757 - Smed_1547 - major facilitator transporter 1530 65.90 +1 1641173..1641433 - 86 150396758 - Smed_1548 - hypothetical protein 1531 61.18 0 1641637..1642548 + 303 150396759 - Smed_1549 - coproporphyrinogen III oxidase 1532 62.72 0 1642633..1642911 + 92 150396760 - Smed_1550 - transport-associated 1533 60.98 0 1643085..1643699 - 204 150396761 - Smed_1551 - hypothetical protein 1534 57.08 -1 1643779..1645155 - 458 150396762 - Smed_1552 - hypothetical protein 1535 60.35 0 1645242..1646048 - 268 150396763 - Smed_1553 - ABC transporter related 1536 62.37 0 1646059..1647198 - 379 150396764 - Smed_1554 - hypothetical protein 1537 63.52 0 1647384..1648367 + 327 150396765 - Smed_1555 - mandelate racemase/muconate lactonizing protein 1538 60.95 0 1648319..1649542 - 407 150396766 - Smed_1556 - major facilitator transporter 1539 59.95 0 1649680..1650513 - 277 150396767 - Smed_1557 - metallophosphoesterase 1540 62.26 0 1650759..1653071 + 770 150396768 - Smed_1558 - malic enzyme 61.69 MEAN 2.82 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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