version 1.0
Sinorhizobium medicae WSM419, complete genome - 1..3781904 3529 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1365 58.97 0 1457567..1457956 - 129 150396593 - Smed_1379 - DGPFAETKE family protein 1366 61.46 0 1458118..1458405 - 95 150396594 - Smed_1380 - hypothetical protein 1367 61.24 0 1458533..1458790 + 85 150396595 - Smed_1381 - hypothetical protein 1368 55.71 -2 1458843..1459061 - 72 150396596 - Smed_1382 - hypothetical protein 1369 60.91 0 1459146..1459388 - 80 150396597 - Smed_1383 - hypothetical protein 1370 61.53 0 1459704..1460306 - 200 150396598 - Smed_1384 - TrpR binding protein WrbA 1371 61.42 0 1460469..1461230 + 253 150396599 - Smed_1385 - molybdopterin binding domain-containing protein 1372 59.44 0 1461420..1461917 + 165 150396600 - Smed_1386 - xanthine-guanine phosphoribosyltransferase 1373 64.70 +1 1461949..1463421 - 490 150396601 - Smed_1387 - carbohydrate kinase, YjeF related protein 1374 56.93 -1 1463770..1464108 + 112 150396602 - Smed_1388 - nitrogen regulatory protein P-II 1375 58.51 -1 1464190..1465599 + 469 150396603 - Smed_1389 - glutamine synthetase, type I 1376 55.45 -2 1465780..1466109 + 109 150396604 - Smed_1390 - hemimethylated DNA binding protein 1377 61.15 0 1466267..1467046 - 259 150396605 - Smed_1391 - ABC transporter related 1378 64.05 0 1467056..1468087 - 343 150396606 - Smed_1392 - transport system permease protein 1379 65.28 +1 1468087..1469094 - 335 150396607 - Smed_1393 - transport system permease protein 1380 60.36 0 1469115..1470113 - 332 150396608 - Smed_1394 - periplasmic binding protein 1381 60.04 0 1470631..1471521 + 296 150396609 - Smed_1395 - LysR family transcriptional regulator 1382 60.00 0 1471600..1472229 - 209 150396610 - Smed_1396 - invasion associated locus B family protein 1383 59.25 0 1472542..1474362 + 606 150396611 - Smed_1397 - extracellular solute-binding protein 1384 60.66 0 1474445..1475110 + 221 150396612 - Smed_1398 - DSBA oxidoreductase 1385 62.77 0 1475152..1478667 - 1171 150396613 - Smed_1399 - transcription-repair coupling factor 1386 61.54 0 1478664..1478975 - 103 150396614 - Smed_1400 - hypothetical protein 1387 64.48 0 1479092..1481197 + 701 150396615 - Smed_1401 - ATP-dependent DNA helicase RecG 1388 58.01 -1 1481214..1481906 - 230 150396616 - Smed_1402 - hypothetical protein 1389 62.25 0 1481925..1482422 - 165 150396617 - Smed_1403 - GCN5-related N-acetyltransferase 1390 61.30 0 1482419..1484245 - 608 150396618 - Smed_1404 - D-fructose-6-phosphate amidotransferase 1391 64.04 0 1484423..1485793 - 456 150396619 - Smed_1405 - nucleotidyl transferase 1392 62.78 0 1485961..1487607 - 548 150396620 - Smed_1406 - sodium-dependent inorganic phosphate (Pi) transporter 1393 63.07 0 1487958..1489850 + 630 150396621 - Smed_1407 - putative peptidyl-prolyl cis-trans isomerase protein 1394 64.60 +1 1489869..1490882 + 337 150396622 trpD Smed_1408 - anthranilate phosphoribosyltransferase 1395 61.15 0 1490892..1491707 + 271 150396623 trpC Smed_1409 - indole-3-glycerol-phosphate synthase 1396 63.23 0 1491707..1492201 + 164 150396624 moaC Smed_1410 - molybdenum cofactor biosynthesis protein C 1397 62.41 0 1492201..1493421 + 406 150396625 - Smed_1411 - molybdenum cofactor synthesis domain-containing protein 1398 64.43 0 1493423..1494004 - 193 150396626 - Smed_1412 - hypothetical protein 1399 57.85 -1 1494057..1495349 - 430 150396627 - Smed_1413 - hypothetical protein 1400 61.62 0 1495463..1496215 - 250 150396628 - Smed_1414 - GntR domain-containing protein 1401 59.76 0 1496470..1497540 - 356 150396629 - Smed_1415 - basic membrane lipoprotein 1402 62.32 0 1497581..1498501 - 306 150396630 - Smed_1416 - inner-membrane translocator 1403 60.64 0 1498501..1499595 - 364 150396631 - Smed_1417 - inner-membrane translocator 1404 63.30 0 1499585..1501219 - 544 150396632 - Smed_1418 - ABC transporter related 1405 60.63 0 1501266..1502243 - 325 150396633 - Smed_1419 - alcohol dehydrogenase 1406 56.47 -1 1502278..1503003 - 241 150396634 - Smed_1420 - phosphatidylcholine synthase 1407 62.71 0 1503409..1504620 + 403 150396635 - Smed_1421 - 2-octaprenyl-6-methoxyphenyl hydroxylase 1408 61.27 0 1504588..1505550 - 320 150396636 - Smed_1422 - auxin efflux carrier 1409 60.62 0 1505580..1506323 - 247 150396637 - Smed_1423 - cytochrome c biogenesis protein transmembrane region 1410 55.97 -2 1506918..1507964 + 348 150396638 - Smed_1424 - FkbM family methyltransferase 1411 54.92 -2 1507976..1508239 + 87 150396639 - Smed_1425 - hypothetical protein 1412 59.10 0 1508358..1509242 + 294 150396640 - Smed_1426 - Ku family containing protein 1413 57.35 -1 1509255..1510070 + 271 150396641 - Smed_1427 - Ku family containing protein 1414 55.59 -2 1510331..1511188 + 285 150396642 - Smed_1428 - methyltransferase type 12 1415 56.00 -2 1511280..1511579 - 99 150396643 - Smed_1429 - putative signal peptide protein 1416 64.68 +1 1511807..1512208 + 133 150396644 - Smed_1430 - hypothetical protein 1417 62.50 0 1513078..1513485 + 135 150396645 - Smed_1431 - hypothetical protein 1418 60.00 0 1513720..1514034 + 104 150396646 - Smed_1432 - hypothetical protein 1419 62.38 0 1514091..1515116 - 341 150396647 - Smed_1433 - AraC family transcriptional regulator 1420 62.35 0 1515373..1516020 + 215 150396648 - Smed_1434 - porin 1421 59.09 0 1516243..1516506 + 87 150396649 - Smed_1435 - putative signal peptide protein 1422 61.29 0 1516552..1517406 - 284 150396650 - Smed_1436 - hypothetical protein 1423 61.62 0 1517409..1518161 - 250 150396651 - Smed_1437 - short-chain dehydrogenase/reductase SDR 1424 61.64 0 1518158..1519807 - 549 150396652 - Smed_1438 - acyl-CoA synthetase 1425 61.71 0 1519804..1520973 - 389 150396653 - Smed_1439 - acetyl-CoA acetyltransferase 1426 64.43 0 1520970..1521818 - 282 150396654 - Smed_1440 - regulatory protein IclR 1427 62.81 0 1521822..1522625 - 267 150396655 - Smed_1441 - short-chain dehydrogenase/reductase SDR 1428 59.45 0 1522726..1523736 - 336 150396656 - Smed_1442 - TRAP dicarboxylate transporter, DctP subunit 1429 61.69 0 1523785..1525653 - 622 150396657 - Smed_1443 - TRAP C4-dicarboxylate transport system permease DctM subunit 1430 56.75 -1 1526132..1526383 + 83 150396658 - Smed_1444 - hypothetical protein 1431 54.90 -2 1527008..1527313 + 101 150396659 - Smed_1445 - hypothetical protein 1432 57.84 -1 1527731..1528036 - 101 150396660 - Smed_1447 - ETC complex I subunit region 1433 61.38 0 1528260..1528751 - 163 150396661 - Smed_1448 - hypothetical protein 1434 61.31 0 1528751..1529329 - 192 150396662 - Smed_1449 - cold-shock DNA-binding domain-containing protein 1435 59.41 0 1529526..1529966 + 146 150396663 - Smed_1450 - glyoxalase/bleomycin resistance protein/dioxygenase 1436 63.75 0 1530377..1531678 + 433 150396664 - Smed_1451 - peptidase M15A 1437 63.28 0 1532678..1534480 - 600 150396665 - Smed_1452 - single-stranded-DNA-specific exonuclease RecJ 1438 60.17 0 1534608..1535930 - 440 150396666 - Smed_1453 - homoserine dehydrogenase 1439 60.59 0 1536009..1537226 - 405 150396667 - Smed_1454 - aminotransferase 1440 60.13 0 1537351..1537656 - 101 150396668 - Smed_1455 - hypothetical protein 1441 60.68 0 1537766..1539601 + 611 150396669 - Smed_1456 - poly(R)-hydroxyalkanoic acid synthase, class I 1442 59.44 0 1539645..1540364 + 239 150396670 - Smed_1457 - sugar fermentation stimulation protein A 1443 60.71 0 1540394..1541233 + 279 150396671 - Smed_1458 - methionine aminopeptidase 1444 61.69 0 1541230..1542012 + 260 150396672 radC Smed_1459 - DNA repair protein RadC 1445 60.50 0 1542215..1543219 - 334 150396673 - Smed_1460 - Beta-lactamase 1446 59.04 0 1543281..1544303 + 340 150396674 - Smed_1461 - LysR family transcriptional regulator 1447 60.04 0 1544468..1545976 + 502 150396675 - Smed_1462 - soluble pyridine nucleotide transhydrogenase 1448 61.07 0 1546098..1546490 - 130 150396676 - Smed_1463 - FeS assembly scaffold SufA 1449 58.53 -1 1546594..1546974 - 126 150396677 - Smed_1464 - FeS assembly SUF system protein 1450 59.66 0 1546985..1548226 - 413 150396678 - Smed_1465 - SufS subfamily cysteine desulfurase 1451 61.11 0 1548239..1549516 - 425 150396679 - Smed_1466 - FeS assembly protein SufD 1452 59.13 0 1549539..1550294 - 251 150396680 - Smed_1467 - FeS assembly ATPase SufC 1453 58.03 -1 1550403..1551872 - 489 150396681 - Smed_1468 - cysteine desulfurase activator complex subunit SufB 1454 65.01 +1 1552027..1553235 - 402 150396682 - Smed_1469 - aminotransferase class V 1455 60.03 0 1553414..1554091 + 225 150396683 - Smed_1470 - hypothetical protein 1456 62.49 0 1554179..1555375 - 398 150396684 - Smed_1471 - diguanylate cyclase 1457 60.75 0 1555466..1556614 - 382 150396685 anmK Smed_1472 - anhydro-N-acetylmuramic acid kinase 1458 60.37 0 1556778..1558031 + 417 150396686 - Smed_1473 - tyrosyl-tRNA synthetase 1459 62.86 0 1558074..1561460 - 1128 150396687 - Smed_1474 - hypothetical protein 1460 58.97 0 1561879..1562346 + 155 150396688 - Smed_1475 - alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 1461 63.65 0 1562364..1563191 + 275 150396689 - Smed_1476 - hypothetical protein 1462 61.85 0 1563333..1564661 + 442 150396690 - Smed_1477 - peptidase M23B 1463 59.67 0 1564858..1566357 + 499 150396691 - Smed_1478 - DEAD/DEAH box helicase domain-containing protein 1464 62.75 0 1566368..1566775 + 135 150396692 - Smed_1479 - NUDIX hydrolase 61.69 MEAN 2.82 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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