version 1.0
Sinorhizobium medicae WSM419, complete genome - 1..3781904 3529 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1161 60.68 0 1246741..1247391 + 216 150396389 - Smed_1170 - biotin-regulated protein 1162 63.99 0 1247627..1249156 + 509 150396390 - Smed_1171 - peptidase M23B 1163 60.16 0 1249560..1250435 - 291 150396391 - Smed_1172 - hypothetical protein 1164 60.36 0 1250772..1251104 + 110 150396392 - Smed_1173 - preprotein translocase, YajC subunit 1165 61.04 0 1251265..1253841 + 858 150396393 - Smed_1174 - bifunctional preprotein translocase subunit SecD/SecF 1166 65.12 +1 1253844..1254230 + 128 150396394 - Smed_1175 - hypothetical protein 1167 62.63 0 1254252..1255094 + 280 150396395 - Smed_1176 - putative phytoene synthase protein 1168 59.43 0 1255176..1255631 + 151 150396396 - Smed_1177 - hypothetical protein 1169 62.44 0 1255641..1257083 - 480 150396397 - Smed_1178 - tRNA (uracil-5-)-methyltransferase Gid 1170 56.94 -1 1257175..1257318 - 47 150396398 - Smed_1179 - hypothetical protein 1171 54.73 -2 1257614..1257814 - 66 150396399 - Smed_1180 - hypothetical protein 1172 59.62 0 1259019..1260494 + 491 150396400 tig Smed_1181 - trigger factor 1173 62.58 0 1260884..1263748 - 954 150396401 - Smed_1182 - glycine dehydrogenase 1174 61.71 0 1263748..1264110 - 120 150396402 - Smed_1183 - glycine cleavage system protein H 1175 62.46 0 1264127..1265266 - 379 150396403 - Smed_1184 - glycine cleavage system aminomethyltransferase T 1176 66.16 +1 1265651..1266043 + 130 150396404 - Smed_1185 - hypothetical protein 1177 62.20 0 1266132..1267115 + 327 150396405 - Smed_1186 - hypothetical protein 1178 61.75 0 1267210..1267575 - 121 150396406 - Smed_1187 - hypothetical protein 1179 60.49 0 1268674..1268835 - 53 150396407 - Smed_1188 - hypothetical protein 1180 58.24 -1 1270069..1271907 - 612 150396408 - Smed_1190 - hypothetical protein 1181 62.88 0 1271904..1272986 - 360 150396409 - Smed_1191 - hypothetical protein 1182 60.28 0 1273004..1275226 - 740 150396410 - Smed_1192 - integrase, catalytic region 1183 61.98 0 1275242..1275967 - 241 150396411 - Smed_1193 - hypothetical protein 1184 56.32 -1 1275930..1276103 - 57 150396412 - Smed_1194 - hypothetical protein 1185 59.70 0 1276181..1276582 - 133 150396413 - Smed_1195 - hypothetical protein 1186 62.26 0 1277378..1278058 + 226 150396414 - Smed_1196 - hypothetical protein 1187 58.51 -1 1278066..1278629 - 187 150396415 - Smed_1197 - PilT domain-containing protein 1188 60.36 0 1279081..1280253 - 390 150396416 - Smed_1198 - hypothetical protein 1189 58.99 0 1280261..1280677 - 138 150396417 - Smed_1199 - MerR family transcriptional regulator 1190 53.70 -2 1280952..1281113 + 53 150396418 - Smed_1200 - hypothetical protein 1191 60.13 0 1281258..1281884 + 208 150396419 - Smed_1201 - hypothetical protein 1192 60.46 0 1281895..1283778 + 627 150396420 - Smed_1202 - ATPase central domain-containing protein 1193 61.36 0 1283788..1283919 + 43 150396421 - Smed_1203 - hypothetical protein 1194 55.76 -2 1284179..1284985 + 268 150396422 - Smed_1204 - hypothetical protein 1195 62.19 0 1285540..1287438 - 632 150396423 - Smed_1205 - DNA-cytosine methyltransferase 1196 61.23 0 1287909..1289048 + 379 150396424 - Smed_1206 - hypothetical protein 1197 60.24 0 1289077..1291845 - 922 150396425 - Smed_1207 - transcriptional regulator 1198 63.53 0 1292044..1292457 + 137 150396426 - Smed_1208 - hypothetical protein 1199 58.67 -1 1292493..1293305 + 270 150396427 - Smed_1209 - short chain dehydrogenase 1200 57.74 -1 1293387..1293890 + 167 150396428 - Smed_1210 - ketosteroid isomerase-like protein 1201 61.09 0 1293918..1294742 + 274 150396429 - Smed_1211 - short-chain dehydrogenase/reductase SDR 1202 56.90 -1 1294901..1296712 + 603 150396430 - Smed_1212 - potassium efflux system protein 1203 58.80 -1 1296732..1297913 + 393 150396431 - Smed_1213 - aminotransferase class V 1204 55.41 -2 1298010..1298720 + 236 150396432 - Smed_1214 - ChaC family protein 1205 60.35 0 1298896..1299180 - 94 150396433 - Smed_1215 - hypothetical protein 1206 58.56 -1 1300036..1300911 - 291 150396434 - Smed_1216 - metallophosphoesterase 1207 53.99 -2 1301015..1301653 - 212 150396435 - Smed_1217 - hypothetical protein 1208 53.95 -2 1301676..1301966 - 96 150396436 - Smed_1218 - hypothetical protein 1209 56.48 -1 1301983..1303857 - 624 150396437 - Smed_1219 - hypothetical protein 1210 64.12 0 1303876..1304346 + 156 150396438 - Smed_1220 - transposase IS3/IS911 family protein 1211 59.66 0 1304343..1304699 + 118 150396439 - Smed_1221 - IS66 Orf2 family protein 1212 63.65 0 1304748..1305509 + 253 150396440 - Smed_1222 - transposase IS66 1213 56.11 -1 1306022..1307281 + 419 150396441 - Smed_1223 - RNA-directed DNA polymerase (Reverse transcriptase) 1214 61.40 0 1307335..1308207 + 290 150396442 - Smed_1224 - transposase IS66 1215 58.87 0 1308204..1308767 + 187 150396443 - Smed_1225 - yecA family protein 1216 56.06 -1 1308825..1308956 - 43 150396444 - Smed_1226 - hypothetical protein 1217 56.70 -1 1308943..1309464 - 173 150396445 - Smed_1227 - hypothetical protein 1218 53.61 -2 1309461..1310042 - 193 150396446 - Smed_1228 - hypothetical protein 1219 59.93 0 1310585..1311133 - 182 150396447 - Smed_1229 - hypothetical protein 1220 59.70 0 1311269..1312345 - 358 150396448 - Smed_1230 - patatin 1221 59.55 0 1312302..1312793 - 163 150396449 - Smed_1231 - hypothetical protein 1222 59.33 0 1312774..1314096 - 440 150396450 - Smed_1232 - hypothetical protein 1223 62.50 0 1314286..1318077 - 1263 150396451 - Smed_1233 - ribonucleotide-diphosphate reductase subunit alpha 1224 60.32 0 1318778..1319581 - 267 150396452 - Smed_1234 - hypothetical protein 1225 62.42 0 1319713..1322634 - 973 150396453 uvrA Smed_1235 - excinuclease ABC subunit A 1226 61.21 0 1322921..1323433 + 170 150396454 - Smed_1236 - single-strand DNA-binding protein 1227 63.39 0 1323506..1325914 - 802 150396455 - Smed_1237 - TPR repeat-containing protein 1228 59.76 0 1325958..1326971 - 337 150396456 - Smed_1238 - NapD-like protein 1229 60.30 0 1327067..1328731 - 554 150396457 - Smed_1239 - sulfatase 1230 61.59 0 1329065..1329694 - 209 150396458 - Smed_1240 - multiple antibiotic resistance (MarC)-related protein 1231 62.63 0 1329990..1332785 + 931 150396459 - Smed_1241 - DNA gyrase subunit A 1232 59.98 0 1332956..1333942 - 328 150396460 - Smed_1242 - lytic transglycosylase catalytic 1233 60.98 0 1334015..1334524 - 169 150396461 - Smed_1243 - GCN5-related N-acetyltransferase 1234 62.88 0 1334560..1335378 - 272 150396462 - Smed_1244 - aminoglycoside/hydroxyurea antibiotic resistance kinase 1235 62.75 0 1335436..1336557 - 373 150396463 - Smed_1245 - NADH:flavin oxidoreductase/NADH oxidase 1236 59.79 0 1336608..1336898 - 96 150396464 - Smed_1246 - regulatory protein ArsR 1237 57.64 -1 1337537..1338433 - 298 150396465 - Smed_1247 - LysR family transcriptional regulator 1238 60.62 0 1338665..1339639 - 324 150396466 - Smed_1248 - thioredoxin reductase 1239 59.24 0 1340078..1340548 + 156 150396467 - Smed_1249 - AsnC family transcriptional regulator 1240 59.41 0 1340646..1341458 + 270 150396468 - Smed_1250 - glycosyl transferase family protein 1241 59.01 0 1341477..1342508 + 343 150396469 - Smed_1251 - phosphatidylserine decarboxylase 1242 60.70 0 1342505..1343527 + 340 150396470 - Smed_1252 - phosphatidylserine decarboxylase 1243 63.64 0 1343557..1344612 - 351 150396471 - Smed_1253 - glycosyl transferase group 1 1244 58.07 -1 1344698..1345174 - 158 150396472 greA Smed_1254 - transcription elongation factor GreA 1245 62.61 0 1345464..1346942 + 492 150396473 - Smed_1255 - major facilitator transporter 1246 60.90 0 1346887..1347198 - 103 150396474 - Smed_1256 - hypothetical protein 1247 62.40 0 1347330..1350821 - 1163 150396475 carB Smed_1257 - carbamoyl phosphate synthase large subunit 1248 64.54 +1 1351031..1352065 - 344 150396476 - Smed_1258 - alcohol dehydrogenase 1249 62.07 0 1352284..1353219 + 311 150396477 - Smed_1259 - protein of unknown function zinc metallopeptidase putative 1250 62.36 0 1353263..1354261 - 332 150396478 - Smed_1260 - aldo/keto reductase 1251 63.81 0 1354379..1355287 + 302 150396479 - Smed_1261 - LysR family transcriptional regulator 1252 60.43 0 1355444..1356709 + 421 150396480 - Smed_1262 - major facilitator transporter 1253 61.32 0 1356867..1358270 + 467 150396481 - Smed_1263 - MATE efflux family protein 1254 60.44 0 1358823..1359368 + 181 150396482 coaD Smed_1264 - phosphopantetheine adenylyltransferase 1255 60.91 0 1359393..1359983 + 196 150396483 - Smed_1265 - peptidyl-prolyl cis-trans isomerase cyclophilin type 1256 60.59 0 1360008..1360517 + 169 150396484 - Smed_1266 - peptidyl-prolyl cis-trans isomerase cyclophilin type 1257 62.70 0 1360595..1361677 + 360 150396485 queA Smed_1267 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1258 62.51 0 1361678..1362808 + 376 150396486 tgt Smed_1268 - queuine tRNA-ribosyltransferase 1259 65.65 +1 1362916..1363800 - 294 150396487 - Smed_1269 - short-chain dehydrogenase/reductase SDR 1260 61.96 0 1363797..1364582 - 261 150396488 - Smed_1270 - hypothetical protein 61.69 MEAN 2.82 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.