version 1.0
Shigella sonnei Ss046, complete genome - 1..4825265 4219 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 923 51.90 0 1063873..1064319 - 148 161986556 etp SSON_0989 - phosphotyrosine-protein phosphatase 924 50.96 0 1064307..1065446 - 379 74311540 yccZ SSON_0990 - putative function in exopolysaccharide production 925 52.03 0 1065492..1067588 - 698 74311541 ymcA SSON_0991 - hypothetical protein 926 52.21 0 1067588..1068334 - 248 74311542 ymcB SSON_0992 - hypothetical protein 927 47.75 0 1068331..1068975 - 214 74311543 ymcC SSON_0993 - putative regulator 928 55.25 0 1069082..1069405 - 107 74311544 ymcD SSON_0994 - hypothetical protein 929 46.95 -1 1069834..1070046 - 70 74311545 cspH SSON_0995 - cold shock-like protein 930 54.37 0 1070143..1070646 - 167 74311546 - SSON_0996 - IS1 ORF 931 44.13 -1 1071109..1071321 + 70 74311547 cspG SSON_0997 - cold shock protein CspG 932 41.56 -2 1071495..1071725 + 76 74311548 sfa SSON_0998 - cold shock gene 933 39.66 -2 1071715..1071888 + 57 74311549 gnsA SSON_0999 - GnsA 934 54.06 0 1073082..1075826 - 914 161986555 torS SSON_1001 - hybrid sensory histidine kinase TorS 935 52.77 0 1075909..1076937 + 342 74311551 torT SSON_1002 - periplasmic sensory protein associated with the TorRS two-component regulatory system 936 52.53 0 1076910..1077602 - 230 74311552 torR SSON_1003 - DNA-binding transcriptional regulator TorR 937 51.75 0 1077722..1078894 + 390 74311553 torC SSON_1004 - trimethylamine N-oxide reductase, cytochrome c-type subunit 938 53.92 0 1081944..1082249 - 101 74311554 yccD SSON_1007 - chaperone-modulator protein CbpM 939 52.99 0 1082249..1083169 - 306 74311555 cbpA SSON_1008 - curved DNA-binding protein CbpA 940 53.00 0 1083494..1084525 + 343 74311556 - SSON_1009 - IS630 orf 941 32.44 -2 1084585..1085145 + 186 74311557 - SSON_1010 - hypothetical protein 942 34.90 -2 1085348..1085731 + 127 74311558 - SSON_1011 - hypothetical protein 943 51.37 0 1086025..1087266 + 413 74311559 agp SSON_1012 - glucose-1-phosphatase/inositol phosphatase 944 47.37 -1 1087304..1087531 - 75 74311560 yccJ SSON_1013 - hypothetical protein 945 53.30 0 1087552..1088157 - 201 74311561 wrbA SSON_1014 - TrpR binding protein WrbA 946 55.08 0 1089027..1089932 + 301 161986554 - SSON_1015 - insertion element IS2 transposase InsD 947 41.69 -2 1089944..1091188 + 414 74311563 - SSON_1016 - hypothetical protein 948 50.93 0 1091312..1092067 - 251 74311564 - SSON_1017 - putative transposase subunit 949 54.04 0 1092084..1093619 - 511 74311565 - SSON_1018 - putative transposase 950 41.77 -2 1094701..1096881 - 726 74311566 - SSON_1019 - hypothetical protein 951 39.38 -2 1097211..1097921 - 236 74311567 - SSON_1020 - hypothetical protein 952 36.58 -2 1100195..1101148 - 317 74311568 - SSON_1021 - hypothetical protein 953 43.24 -2 1101667..1102191 - 174 74311569 - SSON_1022 - putative DNA methylase 954 48.48 0 1103841..1104071 + 76 74311570 ycdF SSON_1023 - hypothetical protein 955 53.98 0 1104435..1105829 - 464 74311571 ycdG SSON_1024 - putative transport protein 956 60.35 +2 1105784..1106242 - 152 74311572 - SSON_1025 - hypothetical protein 957 56.01 +1 1106289..1106879 - 196 74311573 - SSON_1026 - hypothetical protein 958 58.18 +1 1106889..1107689 - 266 74311574 - SSON_1027 - putative acetyltransferase 959 55.92 +1 1108871..1109605 - 244 74311575 - SSON_1030 - putative synthetase 960 54.37 0 1110191..1110694 - 167 74311576 - SSON_1031 - IS1 ORF 961 51.02 0 1111719..1112357 + 212 74311577 ycdC SSON_1033 - putative tet operon regulator 962 56.70 +1 1112397..1116359 - 1320 74311578 putA SSON_1034 - trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 963 53.61 0 1116781..1118289 + 502 74311579 putP SSON_1035 - major sodium/proline symporter 964 54.52 0 1118946..1119785 + 279 74311580 ycdN SSON_1036 - high-affinity iron permease 965 51.24 0 1119843..1120970 + 375 74311581 ycdO SSON_1037 - hypothetical protein 966 53.62 0 1120976..1122247 + 423 74311582 ycdB SSON_1038 - hypothetical protein 967 52.21 0 1122592..1123656 + 354 74311583 phoH SSON_1039 - hypothetical protein 968 43.52 -1 1124237..1124923 + 228 74311584 - SSON_1040 - hypothetical protein 969 51.02 0 1125477..1126454 + 325 74311585 ycdW SSON_1042 - putative dehydrogenase 970 48.24 0 1126509..1127246 + 245 74311586 ycdX SSON_1043 - putative hydrolase 971 53.69 0 1127270..1127824 + 184 74311587 ycdY SSON_1044 - putative oxidoreductase component 972 54.07 0 1127878..1128417 + 179 74311588 ycdZ SSON_1045 - hypothetical protein 973 49.40 0 1128482..1129315 - 277 74311589 csgG SSON_1046 - curli production assembly/transport component, 2nd curli operon 974 41.97 -2 1129342..1129758 - 138 74311590 csgF SSON_1047 - curli assembly protein CsgF 975 43.08 -2 1129783..1130172 - 129 74311591 csgE SSON_1048 - curli assembly protein CsgE 976 54.37 0 1130941..1131444 + 167 74311592 - SSON_1049 - IS1 ORF 977 54.37 0 1132110..1132613 + 167 74311593 - SSON_1051 - IS1 ORF 978 41.67 -2 1133134..1133589 + 151 74311594 csgB SSON_1052 - curlin minor subunit 979 50.77 0 1133630..1134082 + 150 74311595 csgA SSON_1053 - cryptic curlin major subunit 980 53.03 0 1134198..1135370 + 390 74311596 - SSON_1054 - IS21 ORF1 981 52.63 0 1135370..1136167 + 265 74311597 - SSON_1055 - IS21 ORF2 982 43.24 -2 1136274..1136606 + 110 74311598 csgC SSON_1056 - putative autoagglutination protein 983 43.27 -1 1136727..1137038 + 103 74311599 - SSON_1057 - hypothetical protein 984 51.87 0 1137133..1137666 + 177 74311600 - SSON_1058 - hypothetical protein 985 50.54 0 1137608..1139089 + 493 74311601 ymdC SSON_1059 - putative synthase 986 43.78 -1 1139097..1140254 - 385 74311602 mdoC SSON_1060 - glucans biosynthesis protein 987 49.87 0 1140649..1142184 + 511 74311603 mdoG SSON_1061 - glucan biosynthesis protein G 988 55.03 0 1142177..1144720 + 847 74311604 mdoH SSON_1062 - glucosyltransferase MdoH 989 53.90 0 1144933..1146279 + 448 74311605 - SSON_1063 - IS4 orf 990 51.75 0 1146332..1146559 + 75 74311606 yceK SSON_1064 - hypothetical protein 991 50.26 0 1146560..1146937 - 125 74311607 msyB SSON_1065 - hypothetical protein 992 45.45 -1 1146964..1147062 - 32 74311608 - SSON_1066 - hypothetical protein 993 52.00 0 1147017..1148066 - 349 74311609 yceE SSON_1067 - putative transport protein 994 57.73 +1 1149266..1150462 - 398 74311610 - SSON_1068 - ISSfl2 ORF 995 50.93 0 1150820..1151575 - 251 74311611 - SSON_1069 - putative transposase subunit 996 53.97 0 1151592..1153127 - 511 74311612 - SSON_1070 - putative transposase 997 55.19 0 1154015..1154920 - 301 161986553 - SSON_1071 - insertion element IS2 transposase InsD 998 53.01 0 1154878..1155243 - 121 74311614 - SSON_1072 - insertion sequence 2 OrfA protein 999 49.66 0 1155526..1155966 + 146 74311615 - SSON_1073 - IS600 ORF2 1000 52.77 0 1156514..1157434 - 306 74311616 htrB SSON_1074 - lipid A biosynthesis lauroyl acyltransferase 1001 49.67 0 1157659..1158711 + 350 74311617 yceA SSON_1075 - hypothetical protein 1002 47.40 -1 1158753..1159328 - 191 74311618 yceI SSON_1076 - hypothetical protein 1003 51.32 0 1159332..1159898 - 188 74311619 - SSON_1077 - putative cytochrome 1004 54.37 0 1160176..1160679 + 167 74311620 - SSON_1078 - IS1 ORF 1005 52.46 0 1160770..1161888 - 372 74311621 solA SSON_1079 - N-methyltryptophan oxidase 1006 44.71 -1 1162003..1162257 - 84 74311622 bssS SSON_1080 - biofilm formation regulatory protein BssS 1007 47.97 0 1162547..1162792 - 81 74311623 dinI SSON_1081 - DNA damage-inducible protein I 1008 53.10 0 1162866..1163912 - 348 74311624 pyrC SSON_1082 - dihydroorotase 1009 46.70 -1 1164018..1164578 - 186 74311625 yceB SSON_1083 - hypothetical protein 1010 49.07 0 1164712..1165359 - 215 74311626 grxB SSON_1084 - glutaredoxin 2 1011 55.17 0 1165423..1166631 - 402 161986552 yceL SSON_1085 - multidrug resistance protein MdtH 1012 49.40 0 1166867..1167451 + 194 74311628 rimJ SSON_1086 - ribosomal-protein-S5-alanine N-acetyltransferase 1013 52.16 0 1167462..1168109 + 215 74311629 yceH SSON_1087 - hypothetical protein 1014 54.33 0 1168111..1169034 + 307 74311630 mviM SSON_1088 - putative virulence factor 1015 53.58 0 1169144..1170679 + 511 74311631 mviN SSON_1089 - putative virulence factor 1016 47.96 0 1170719..1171135 - 138 74311632 flgN SSON_1090 - protein of flagellar biosynthesis 1017 52.04 0 1171140..1171433 - 97 74311633 flgM SSON_1091 - anti-sigma28 factor FlgM 1018 52.73 0 1171509..1172168 - 219 74311634 flgA SSON_1092 - flagellar basal body P-ring biosynthesis protein FlgA 1019 53.48 0 1172323..1172739 + 138 74311635 flgB SSON_1093 - flagellar basal body rod protein FlgB 1020 53.33 0 1172743..1173147 + 134 74311636 flgC SSON_1094 - flagellar basal body rod protein FlgC 1021 54.89 0 1173159..1173854 + 231 74311637 flgD SSON_1095 - flagellar basal body rod modification protein 1022 51.58 0 1173879..1175084 + 401 74311638 flgE SSON_1096 - flagellar hook protein FlgE 51.65 MEAN 4.20 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0