IslandPath Analysis: Shigella sonnei Ss046



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 51.65   STD DEV: 4.20
Shigella sonnei Ss046, complete genome - 1..4825265
4219 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
764	 48.44	0	873786..874169	+	127	74311380	bssR	SSON_0819	-	biofilm formation regulatory protein BssR
765	 51.88	0	874280..875395	+	371	74311381	yliI	SSON_0820	-	putative dehydrogenase
766	 53.37	0	875392..875970	-	192	74311382	yliJ	SSON_0821	-	putative transferase
767	 46.20	-1	876440..876742	+	100	74311383	-	SSON_0823	-	IS600 ORF1
768	 52.10	0	876883..877596	+	237	74311384	-	SSON_0824	-	IS600 ORF2
769	 50.46	0	878781..879539	-	252	74311385	deoR	SSON_0825	-	DNA-binding transcriptional repressor DeoR
770	 51.76	0	879597..880193	-	198	74311386	ybjG	SSON_0826	-	undecaprenyl pyrophosphate phosphatase
771	 52.98	0	881746..882030	-	94	74311387	ybjH	SSON_0828	-	hypothetical protein
772	 46.39	-1	882116..882904	-	262	74311388	-	SSON_0829	-	hypothetical protein
773	 54.59	0	882931..884139	-	402	74311389	-	SSON_0830	-	putative DEOR-type transcriptional regulator
774	 51.02	0	884223..884759	+	178	74311390	-	SSON_0831	-	putative DEOR-type transcriptional regulator
775	 51.19	0	884934..886619	-	561	74311391	-	SSON_0832	-	hypothetical protein
776	 48.94	0	886889..887266	+	125	74311392	ybjM	SSON_0833	-	hypothetical protein
777	 44.96	-1	887296..887553	-	85	74311393	grxA	SSON_0834	-	glutaredoxin 1
778	 50.35	0	887713..888000	+	95	74311394	ybjC	SSON_0835	-	hypothetical protein
779	 52.42	0	887984..888706	+	240