IslandPath Analysis: Shigella sonnei Ss046



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 51.65   STD DEV: 4.20
Shigella sonnei Ss046, complete genome - 1..4825265
4219 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
700	 50.17	0	794174..795937	-	587	74311316	ipaH_1	SSON_0751	-	invasion plasmid antigen
701	 52.41	0	796519..796995	-	158	74311317	ybhB	SSON_0752	-	putative kinase inhibitor protein
702	 56.20	+1	797054..798343	-	429	74311318	bioA	SSON_0753	-	adenosylmethionine--8-amino-7-oxononanoate transaminase
703	 55.14	0	798430..799470	+	346	74311319	bioB	SSON_0754	-	biotin synthesis
704	 58.53	+1	799467..800621	+	384	74311320	bioF	SSON_0755	-	8-amino-7-oxononanoate synthase
705	 56.48	+1	800608..801363	+	251	74311321	bioC	SSON_0756	-	biotin biosynthesis protein BioC
706	 53.69	0	801356..802033	+	225	74311322	bioD	SSON_0757	-	dithiobiotin synthetase
707	 53.31	0	802612..804633	+	673	74311323	uvrB	SSON_0758	-	excinuclease ABC subunit B
708	 51.60	0	804825..805733	-	302	74311324	ybhK	SSON_0759	-	putative structural protein
709	 53.94	0	806130..807119	+	329	74311325	moaA	SSON_0760	-	molybdenum cofactor biosynthesis protein A
710	 52.44	0	807141..807653	+	170	74311326	moaB	SSON_0761	-	molybdopterin biosynthesis, protein B
711	 56.17	+1	807656..808141	+	161	74311327	moaC	SSON_0762	-	molybdenum cofactor biosynthesis protein C
712	 56.91	+1	808134..808379	+	81	74311328	moaD	SSON_0763	-	molybdopterin synthase small subunit
713	 57.40	+1	808381..808833	+	150	74311329	MoaE	SSON_0764	-	molybdopterin synthase large subunit
714	 48.51	0	808970..809674	+	234	74311330	ybhL	SSON_0765	-	hypothetical protein
715	 42.58	-2	809879..810592	+	237