IslandPath Analysis: Shigella sonnei Ss046



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 51.65   STD DEV: 4.20
Shigella sonnei Ss046, complete genome - 1..4825265
4219 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
691	 44.84	-1	784415..785431	-	338	74311307	ybhD	SSON_0742	-	putative transcriptional regulator LYSR-type
692	 54.56	0	785584..786087	-	167	74311308	-	SSON_0743	-	IS1 ORF
693	 52.18	0	786323..788503	+	726	74311309	ybhJ	SSON_0744	-	putative enzyme
694	 53.43	0	788737..790020	-	427	74311310	ybhC	SSON_0745	-	putative pectinesterase
695	 45.02	-1	790155..790967	-	270	74311311	intE	SSON_0746	-	putative integrase fragment
696	 52.10	0	790995..791708	-	237	74311312	-	SSON_0747	-	IS600 ORF2
697	 46.20	-1	791849..792151	-	100	74311313	-	SSON_0748	-	IS600 ORF1
698	 53.43	0	792167..793420	+	417	74311314	-	SSON_0749	-	putative tail fiber protein
699	 53.37	0	793371..793994	+	207	74311315	-	SSON_0750	-	putative tail component of prophage
700	 50.17	0	794174..795937	-	587	74311316	ipaH_1	SSON_0751	-	invasion plasmid antigen
701	 52.41	0	796519..796995	-	158	74311317	ybhB	SSON_0752	-	putative kinase inhibitor protein
702	 56.20	+1	797054..798343	-	429	74311318	bioA	SSON_0753	-	adenosylmethionine--8-amino-7-oxononanoate transaminase
703	 55.14	0	798430..799470	+	346	74311319	bioB	SSON_0754	-	biotin synthesis
704	 58.53	+1	799467..800621	+	384	74311320	bioF	SSON_0755	-	8-amino-7-oxononanoate synthase
705	 56.48	+1	800608..801363	+	251	74311321	bioC	SSON_0756	-	biotin biosynthesis protein BioC
706	 53.69	0	801356..802033	+	225