version 1.0
Shigella sonnei Ss046, complete genome - 1..4825265 4219 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 685 48.59 0 776933..778354 + 473 74311301 - SSON_0736 - putative bacteriophage protein 686 54.57 0 778738..779820 + 360 74311302 - SSON_0737 - putative bacteriophage protein 687 53.81 0 780458..781678 + 406 74311303 - SSON_0738 - putative bacteriophage protein 688 53.25 0 781682..782188 + 168 74311304 - SSON_0739 - putative bacteriophage protein 689 54.37 0 782453..782956 + 167 74311305 - SSON_0740 - IS1 ORF 690 54.52 0 783379..784374 + 331 74311306 ybhE SSON_0741 - 6-phosphogluconolactonase 691 44.84 -1 784415..785431 - 338 74311307 ybhD SSON_0742 - putative transcriptional regulator LYSR-type 692 54.56 0 785584..786087 - 167 74311308 - SSON_0743 - IS1 ORF 693 52.18 0 786323..788503 + 726 74311309 ybhJ SSON_0744 - putative enzyme 694 53.43 0 788737..790020 - 427 74311310 ybhC SSON_0745 - putative pectinesterase 695 45.02 -1 790155..790967 - 270 74311311 intE SSON_0746 - putative integrase fragment 696 52.10 0 790995..791708 - 237 74311312 - SSON_0747 - IS600 ORF2 697 46.20 -1 791849..792151 - 100 74311313 - SSON_0748 - IS600 ORF1 698 53.43 0 792167..793420 + 417 74311314 - SSON_0749 - putative tail fiber protein 699 53.37 0 793371..793994 + 207 74311315 - SSON_0750 - putative tail component of prophage 700 50.17 0 794174..795937 - 587 74311316 ipaH_1 SSON_0751 - invasion plasmid antigen 701 52.41 0 796519..796995 - 158 74311317 ybhB SSON_0752 - putative kinase inhibitor protein 702 56.20 +1 797054..798343 - 429 74311318 bioA SSON_0753 - adenosylmethionine--8-amino-7-oxononanoate transaminase 703 55.14 0 798430..799470 + 346 74311319 bioB SSON_0754 - biotin synthesis 704 58.53 +1 799467..800621 + 384 74311320 bioF SSON_0755 - 8-amino-7-oxononanoate synthase 705 56.48 +1 800608..801363 + 251 74311321 bioC SSON_0756 - biotin biosynthesis protein BioC 706 53.69 0 801356..802033 + 225 74311322 bioD SSON_0757 - dithiobiotin synthetase 707 53.31 0 802612..804633 + 673 74311323 uvrB SSON_0758 - excinuclease ABC subunit B 708 51.60 0 804825..805733 - 302 74311324 ybhK SSON_0759 - putative structural protein 709 53.94 0 806130..807119 + 329 74311325 moaA SSON_0760 - molybdenum cofactor biosynthesis protein A 710 52.44 0 807141..807653 + 170 74311326 moaB SSON_0761 - molybdopterin biosynthesis, protein B 711 56.17 +1 807656..808141 + 161 74311327 moaC SSON_0762 - molybdenum cofactor biosynthesis protein C 712 56.91 +1 808134..808379 + 81 74311328 moaD SSON_0763 - molybdopterin synthase small subunit 713 57.40 +1 808381..808833 + 150 74311329 MoaE SSON_0764 - molybdopterin synthase large subunit 714 48.51 0 808970..809674 + 234 74311330 ybhL SSON_0765 - hypothetical protein 715 42.58 -2 809879..810592 + 237 74311331 ybhM SSON_0766 - hypothetical protein 716 54.91 0 811368..812609 - 413 74311332 ybhO SSON_0768 - cardiolipin synthase 2 717 55.51 0 812606..813367 - 253 74311333 ybhP SSON_0769 - hypothetical protein 718 54.50 0 813500..813910 + 136 74311334 ybhQ SSON_0770 - hypothetical protein 719 52.39 0 813872..814978 - 368 74311335 ybhR SSON_0771 - hypothetical protein 720 55.29 0 814989..816122 - 377 74311336 ybhS SSON_0772 - hypothetical protein 721 54.92 0 816115..817851 - 578 74311337 ybhF SSON_0773 - putative ATP-binding component of a transport system 722 57.56 +1 817844..818842 - 332 74311338 - SSON_0774 - hypothetical protein 723 54.39 0 818842..819525 - 227 74311339 ybiH SSON_0775 - putative DNA-binding transcriptional regulator 724 56.63 +1 819742..821106 + 454 74311340 rhlE SSON_0776 - ATP-dependent RNA helicase RhlE 725 49.48 0 821338..821820 - 160 74311341 ybiA SSON_0777 - hypothetical protein 726 54.25 0 821940..824090 + 716 74311342 dinG SSON_0778 - ATP-dependent DNA helicase DinG 727 55.45 0 824118..825080 + 320 74311343 ybiB SSON_0779 - hypothetical protein 728 55.52 0 825221..826306 + 361 74311344 ybiC SSON_0780 - hypothetical protein 729 50.19 0 826535..826795 - 86 74311345 ybiJ SSON_0781 - hypothetical protein 730 52.06 0 827060..827326 - 88 74311346 ybiI SSON_0782 - hypothetical protein 731 53.54 0 827400..828077 - 225 161986565 ybiX SSON_0783 - putative hydroxylase 732 53.90 0 830122..831468 - 448 74311348 - SSON_0784 - IS4 orf 733 46.42 -1 832104..832508 - 134 74311349 ybiM SSON_0786 - hypothetical protein 734 53.57 0 832559..833566 + 335 74311350 ybiN SSON_0787 - putative SAM-dependent methyltransferase 735 53.41 0 833563..835788 - 741 74311351 ybiO SSON_0788 - hypothetical protein 736 53.94 0 835905..836627 - 240 74311352 glnQ SSON_0789 - glutamine ABC transporter ATP-binding protein 737 53.33 0 836624..837283 - 219 74311353 glnP SSON_0790 - glutamine ABC transporter permease protein 738 48.59 0 837422..838168 - 248 74311354 glnH SSON_0791 - glutamine ABC transporter periplasmic protein 739 49.01 0 838572..839075 - 167 74311355 dps SSON_0792 - DNA starvation/stationary phase protection protein Dps 740 53.60 0 839374..840261 - 295 74311356 ybiF SSON_0793 - threonine and homoserine efflux system 741 51.55 0 840614..841129 + 171 74311357 ompX SSON_0794 - outer membrane protein X 742 48.48 0 841178..842761 - 527 74311358 ybiP SSON_0795 - putative enzyme 743 54.06 0 843347..843814 + 155 74311359 - SSON_0796 - manganese transport regulator MntR 744 52.46 0 843811..844929 + 372 74311360 ybiR SSON_0797 - hypothetical protein 745 53.31 0 844988..845908 - 306 74311361 ybiS SSON_0798 - hypothetical protein 746 52.88 0 846127..847722 + 531 74311362 ybiT SSON_0799 - putative ATP-binding component of a transport system 747 55.16 0 847902..850265 - 787 74311363 - SSON_0800 - putative glucosidase 748 54.15 0 850280..851581 - 433 74311364 - SSON_0801 - putative hexuronate transporter 749 57.43 +1 851876..852979 + 367 74311365 - SSON_0802 - putative transcriptional regulator 750 55.69 0 852946..854211 - 421 74311366 ybiU SSON_0803 - hypothetical protein 751 46.81 -1 854363..855178 - 271 74311367 - SSON_0804 - hypothetical protein 752 54.75 0 855324..857756 - 810 74311368 ybiW SSON_0805 - putative formate acetyltransferase 753 53.72 0 857762..858688 - 308 74311369 ybiY SSON_0806 - putative pyruvate formate-lyase 2 activating enzyme 754 53.70 0 858792..859454 + 220 161986564 mipB SSON_0807 - fructose-6-phosphate aldolase 755 55.73 0 859633..860382 - 249 74311371 moeB SSON_0808 - molybdopterin biosynthesis protein MoeB 756 56.63 +1 860382..861617 - 411 74311372 moeA SSON_0809 - molybdopterin biosynthesis protein MoeA 757 56.42 +1 861821..862786 + 321 74311373 ybiK SSON_0810 - L-asparaginase 758 54.27 0 862806..864644 + 612 74311374 - SSON_0811 - glutathione transporter ATP-binding protein 759 52.50 0 864664..866202 + 512 74311375 - SSON_0812 - putative transport protein 760 53.53 0 866220..867140 + 306 74311376 - SSON_0813 - putative transport system permease protein 761 53.07 0 867143..868054 + 303 74311377 - SSON_0814 - putative transport system permease protein 762 54.37 0 869051..869554 + 167 74311378 - SSON_0816 - IS1 ORF 763 52.71 0 872248..873573 - 441 74311379 yliG SSON_0818 - hypothetical protein 764 48.44 0 873786..874169 + 127 74311380 bssR SSON_0819 - biofilm formation regulatory protein BssR 765 51.88 0 874280..875395 + 371 74311381 yliI SSON_0820 - putative dehydrogenase 766 53.37 0 875392..875970 - 192 74311382 yliJ SSON_0821 - putative transferase 767 46.20 -1 876440..876742 + 100 74311383 - SSON_0823 - IS600 ORF1 768 52.10 0 876883..877596 + 237 74311384 - SSON_0824 - IS600 ORF2 769 50.46 0 878781..879539 - 252 74311385 deoR SSON_0825 - DNA-binding transcriptional repressor DeoR 770 51.76 0 879597..880193 - 198 74311386 ybjG SSON_0826 - undecaprenyl pyrophosphate phosphatase 771 52.98 0 881746..882030 - 94 74311387 ybjH SSON_0828 - hypothetical protein 772 46.39 -1 882116..882904 - 262 74311388 - SSON_0829 - hypothetical protein 773 54.59 0 882931..884139 - 402 74311389 - SSON_0830 - putative DEOR-type transcriptional regulator 774 51.02 0 884223..884759 + 178 74311390 - SSON_0831 - putative DEOR-type transcriptional regulator 775 51.19 0 884934..886619 - 561 74311391 - SSON_0832 - hypothetical protein 776 48.94 0 886889..887266 + 125 74311392 ybjM SSON_0833 - hypothetical protein 777 44.96 -1 887296..887553 - 85 74311393 grxA SSON_0834 - glutaredoxin 1 778 50.35 0 887713..888000 + 95 74311394 ybjC SSON_0835 - hypothetical protein 779 52.42 0 887984..888706 + 240 74311395 mdaA SSON_0836 - nitroreductase A 780 56.04 +1 888767..889669 + 300 74311396 rimK SSON_0837 - ribosomal protein S6 modification protein 781 48.64 0 889757..890233 + 158 74311397 ybjN SSON_0838 - putative sensory transduction regulator 782 50.76 0 890584..891696 + 370 74311398 potF SSON_0839 - putrescine ABC transporter periplasmic substrate-binding protein 783 55.29 0 891791..892924 + 377 161986563 potG SSON_0840 - putrescine transporter ATP-binding subunit 784 50.42 0 892934..893887 + 317 74311400 potH SSON_0841 - putrescine ABC transporter membrane protein 51.65 MEAN 4.20 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0