IslandPath Analysis: Shigella sonnei Ss046



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 51.65   STD DEV: 4.20
Shigella sonnei Ss046, complete genome - 1..4825265
4219 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
668	 46.53	-1	760456..760758	+	100	74311284	-	SSON_0718	-	IS600 ORF1
669	 52.10	0	760899..761612	+	237	74311285	-	SSON_0719	-	IS600 ORF2
670	 39.58	-2	762001..762288	-	95	74311286	rem	SSON_0720	-	hypothetical protein
671	 48.62	0	762921..763607	-	228	74311287	-	SSON_0721	-	hypothetical protein
672	 45.66	-1	763755..764111	-	118	74311288	-	SSON_0722	-	putative bacteriophage protein
673	 54.62	0	764606..765352	-	248	74311289	-	SSON_0723	-	putative replication protein
674	 46.20	-1	766100..766402	+	100	74311290	-	SSON_0725	-	IS600 ORF1
675	 51.96	0	766543..767256	+	237	74311291	-	SSON_0726	-	IS600 ORF2
676	 52.29	0	767484..767789	-	101	74311292	-	SSON_0727	-	putative bacteriophage protein
677	 48.72	0	768804..768959	+	51	74311293	-	SSON_0728	-	hypothetical protein
678	 46.20	-1	769036..769338	+	100	74311294	-	SSON_0729	-	IS600 ORF1
679	 54.64	0	769686..770525	-	279	74311295	-	SSON_0730	-	IS911 ORF2
680	 57.81	+1	771491..772687	-	398	74311296	-	SSON_0731	-	ISSfl2 ORF
681	 55.19	0	773134..774039	-	301	161986566	-	SSON_0732	-	insertion element IS2 transposase InsD
682	 48.80	0	774476..774973	+	165	74311298	-	SSON_0733	-	lysozyme-like protein
683	 52.65	0	774970..775440	+	156	74311299	-	SSON_0734	-	endopeptidase
684	 51.24	0	776236..777000	+	254