IslandPath Analysis: Shigella sonnei Ss046



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 51.65   STD DEV: 4.20
Shigella sonnei Ss046, complete genome - 1..4825265
4219 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
660	 55.40	0	752001..753047	-	348	74311276	galT	SSON_0710	-	galactose-1-phosphate uridylyltransferase
661	 54.28	0	753057..754073	-	338	74311277	galE	SSON_0711	-	UDP-galactose-4-epimerase
662	 52.48	0	754334..755806	-	490	74311278	modF	SSON_0712	-	putative molybdenum transport ATP-binding protein ModF
663	 52.60	0	755874..756662	-	262	74311279	modE	SSON_0713	-	DNA-binding transcriptional regulator ModE
664	 41.33	-2	756791..756940	+	49	74311280	-	SSON_0714	-	hypothetical protein
665	 50.90	0	757106..757879	+	257	74311281	modA	SSON_0715	-	molybdate transporter periplasmic protein
666	 54.20	0	757879..758568	+	229	74311282	modB	SSON_0716	-	molybdate ABC transporter permease protein
667	 53.64	0	758571..759629	+	352	74311283	modC	SSON_0717	-	molybdate transporter ATP-binding protein
668	 46.53	-1	760456..760758	+	100	74311284	-	SSON_0718	-	IS600 ORF1
669	 52.10	0	760899..761612	+	237	74311285	-	SSON_0719	-	IS600 ORF2
670	 39.58	-2	762001..762288	-	95	74311286	rem	SSON_0720	-	hypothetical protein
671	 48.62	0	762921..763607	-	228	74311287	-	SSON_0721	-	hypothetical protein
672	 45.66	-1	763755..764111	-	118	74311288	-	SSON_0722	-	putative bacteriophage protein
673	 54.62	0	764606..765352	-	248	74311289	-	SSON_0723	-	putative replication protein
674	 46.20	-1	766100..766402	+	100	74311290	-	SSON_0725	-	IS600 ORF1
675	 51.96	0	766543..767256	+	237