IslandPath Analysis: Shigella sonnei Ss046



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 51.65   STD DEV: 4.20
Shigella sonnei Ss046, complete genome - 1..4825265
4219 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
472	 58.04	+1	524185..524694	+	169	74311086	purE	SSON_0495	-	phosphoribosylaminoimidazole carboxylase
473	 56.46	+1	524691..525758	+	355	74311087	purK	SSON_0496	-	phosphoribosylaminoimidazole carboxylase ATPase subunit
474	 57.16	+1	525895..526788	-	297	74311088	arcC	SSON_0497	-	carbamate kinase
475	 56.57	+1	526785..527438	-	217	74311089	ylbF	SSON_0498	-	putative carboxylase
476	 57.19	+1	527449..528450	-	333	74311090	ylbE	SSON_0499	-	hypothetical protein
477	 54.37	0	528762..529265	-	167	74311091	-	SSON_0500	-	IS1 ORF
478	 46.24	-1	531529..532380	-	283	74311092	gip	SSON_0503	-	hydroxypyruvate isomerase
479	 54.17	0	532819..533322	+	167	74311093	-	SSON_0504	-	IS1 ORF
480	 45.71	-1	535187..536164	+	325	74311094	sfmH	SSON_0506	-	involved in fimbrial asembly
481	 49.81	0	536175..536690	+	171	74311095	sfmF	SSON_0507	-	putative fimbrial protein
482	 55.19	0	537623..538528	+	301	161986568	-	SSON_0508	-	insertion element IS2 transposase InsD
483	 54.37	0	538633..539136	-	167	74311097	-	SSON_0509	-	IS1 ORF
484	 46.06	-1	539802..540563	-	253	74311098	envY	SSON_0512	-	envelope protein
485	 51.96	0	540746..541636	-	296	74311099	ybcH	SSON_0513	-	hypothetical protein
486	 54.93	0	541637..544609	-	990	74311100	nfrA	SSON_0514	-	bacteriophage N4 receptor, outer membrane subunit
487	 54.56	0	545343..545846	-	167