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Shigella sonnei Ss046, complete genome - 1..4825265 4219 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3599 52.51 0 4065488..4067443 + 651 74314217 yhjK SSON_3862 - putative phosphodiesterase 3600 51.67 0 4067626..4068912 + 428 74314218 dctA SSON_3863 - C4-dicarboxylate transporter DctA 3601 54.11 0 4069132..4070628 + 498 74314219 yhjJ SSON_3864 - hypothetical protein 3602 54.57 0 4070724..4071872 - 382 74314220 kdgK SSON_3865 - ketodeoxygluconokinase 3603 53.05 0 4071882..4072652 + 256 74314221 yhjH SSON_3866 - EAL domain-containing protein 3604 52.99 0 4072707..4074782 + 691 74314222 yhjG SSON_3867 - hypothetical protein 3605 56.01 +1 4074964..4076286 - 440 74314223 yhjE SSON_3868 - putative transport protein 3606 52.96 0 4076697..4077710 - 337 74314224 yhjD SSON_3869 - hypothetical protein 3607 52.06 0 4077759..4078730 - 323 74314225 yhjC SSON_3870 - putative transcriptional regulator LYSR-type 3608 47.93 0 4079178..4079780 + 200 74314226 yhjB SSON_3871 - putative regulator 3609 53.82 0 4079796..4081142 - 448 74314227 - SSON_3872 - IS4 orf 3610 49.51 0 4081274..4082794 + 506 74314228 yieN SSON_3873 - regulatory ATPase RavA 3611 52.82 0 4082788..4084239 + 483 74314229 yieM SSON_3874 - hypothetical protein 3612 56.29 +1 4084244..4085236 - 330 74314230 asnA SSON_3875 - asparagine synthetase AsnA 3613 48.80 0 4085388..4085846 + 152 74314231 asnC SSON_3876 - DNA-binding transcriptional regulator AsnC 3614 49.77 0 4085936..4086379 + 147 74314232 mioC SSON_3877 - flavodoxin 3615 54.50 0 4086758..4088647 + 629 74314233 gidA SSON_3878 - tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 3616 48.72 0 4088711..4089334 + 207 74314234 gidB SSON_3879 - glucose-inhibited division protein B 3617 51.97 0 4089951..4090331 + 126 161986414 atpI SSON_3880 - F0F1 ATP synthase subunit I 3618 50.25 0 4090340..4091155 + 271 74314236 atpB SSON_3881 - F0F1 ATP synthase subunit A 3619 54.17 0 4091202..4091441 + 79 74314237 atpE SSON_3882 - F0F1 ATP synthase subunit C 3620 52.65 0 4091503..4091973 + 156 74314238 atpF SSON_3883 - F0F1 ATP synthase subunit B 3621 51.69 0 4091988..4092521 + 177 74314239 atpH SSON_3884 - F0F1 ATP synthase subunit delta 3622 53.31 0 4092534..4094075 + 513 74314240 atpA SSON_3885 - F0F1 ATP synthase subunit alpha 3623 53.12 0 4094126..4094989 + 287 74314241 atpG SSON_3886 - F0F1 ATP synthase subunit gamma 3624 54.88 0 4095016..4096398 + 460 74314242 atpD SSON_3887 - F0F1 ATP synthase subunit beta 3625 55.24 0 4096419..4096838 + 139 74314243 atpC SSON_3888 - F0F1 ATP synthase subunit epsilon 3626 52.81 0 4097189..4098559 + 456 74314244 glmU SSON_3889 - bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase 3627 53.72 0 4098721..4100550 + 609 74314245 glmS SSON_3890 - D-fructose-6-phosphate amidotransferase 3628 38.53 -2 4100934..4101530 + 198 74314246 - SSON_3891 - putative transposase 3629 44.00 -1 4101517..4103625 + 702 74314247 - SSON_3892 - putative transposase 3630 43.65 -1 4103622..4105289 + 555 74314248 tnsC SSON_3893 - ATP-binding protein 3631 45.19 -1 4105292..4106818 + 508 74314249 tnsD SSON_3894 - transposition protein 3632 42.41 -2 4106927..4108435 + 502 74314250 tnsE SSON_3895 - transposition regulatory protein 3633 53.11 0 4110458..4111246 - 262 74314251 aadA SSON_3896 - aminoglycoside resistance protein 3634 53.90 0 4114725..4116071 + 448 74314252 - SSON_3898 - IS4 orf 3635 47.64 0 4116363..4116935 + 190 74314253 lpfA SSON_3899 - putative major fimbrial subunit 3636 37.62 -2 4116983..4117285 + 100 74314254 - SSON_3900 - putative fimbrial chaperone 3637 54.37 0 4117296..4117799 - 167 74314255 - SSON_3901 - IS1 ORF 3638 54.52 0 4119494..4120333 - 279 74314256 - SSON_3904 - IS911 ORF2 3639 39.39 -2 4122301..4123374 + 357 74314257 - SSON_3905 - putative fimbrial protein 3640 51.30 0 4123622..4124662 + 346 74314258 pstS SSON_3906 - phosphate transporter subunit 3641 54.58 0 4124749..4125708 + 319 74314259 pstC SSON_3907 - phosphate transporter permease subunit 3642 56.90 +1 4125708..4126598 + 296 74314260 pstA SSON_3908 - phosphate transporter permease subunit 3643 52.07 0 4126689..4127462 + 257 74314261 pstB SSON_3909 - phosphate transporter subunit 3644 52.07 0 4127477..4128202 + 241 74314262 phoU SSON_3910 - transcriptional regulator PhoU 3645 42.65 -2 4128488..4129324 + 278 74314263 bglG SSON_3911 - transcriptional antiterminator BglG 3646 51.44 0 4129458..4131335 + 625 74314264 bglF SSON_3912 - beta-glucoside-specific PTS system components IIABC 3647 49.86 0 4131971..4133059 - 362 74314265 - SSON_3914 - putative transposase 3648 45.02 -1 4134352..4135968 + 538 74314266 yieC SSON_3915 - putative receptor protein 3649 53.90 0 4136256..4137602 + 448 74314267 - SSON_3916 - IS4 orf 3650 51.52 0 4137761..4139629 + 622 74314268 trkD SSON_3917 - potassium transport protein Kup 3651 47.15 -1 4139760..4140215 + 151 74314269 rbsD SSON_3918 - D-ribose pyranase 3652 51.26 0 4140223..4141728 + 501 74314270 rbsA SSON_3919 - D-ribose transporter ATP binding protein 3653 53.31 0 4141733..4142698 + 321 74314271 rbsC SSON_3920 - ribose ABC transporter permease protein 3654 52.15 0 4143735..4144664 + 309 74314272 rbsK SSON_3922 - ribokinase 3655 50.55 0 4144668..4145660 + 330 74314273 rbsR SSON_3923 - transcriptional repressor RbsR 3656 49.30 0 4145626..4147053 - 475 74314274 yieO SSON_3924 - putative transport protein 3657 49.73 0 4147076..4147624 - 182 74314275 yieP SSON_3925 - hypothetical protein 3658 48.69 0 4153569..4154408 - 279 74314276 yifDA SSON_3932 - transcriptional regulator HdfR 3659 47.79 0 4154527..4154865 + 112 74314277 yifE SSON_3933 - hypothetical protein 3660 52.63 0 4155340..4156137 - 265 74314278 - SSON_3934 - IS21 ORF2 3661 53.03 0 4156137..4157309 - 390 74314279 - SSON_3935 - IS21 ORF1 3662 54.37 0 4157910..4158413 + 167 74314280 - SSON_3936 - IS1 ORF 3663 52.53 0 4159675..4159773 + 32 74314281 ilvL SSON_3938 - ilvG operon leader peptide 3664 54.40 0 4159913..4161559 + 548 74314282 ilvG SSON_3939 - acetolactate synthase 2 catalytic subunit 3665 49.24 0 4161556..4161819 + 87 74314283 ilvM SSON_3940 - acetolactate synthase 2 regulatory subunit 3666 54.84 0 4161839..4162768 + 309 74314284 ilvE SSON_3941 - branched-chain amino acid aminotransferase 3667 56.29 +1 4162833..4164683 + 616 74314285 ilvD SSON_3942 - dihydroxy-acid dehydratase 3668 58.51 +1 4164686..4166230 + 514 74314286 ilvA SSON_3943 - threonine dehydratase 3669 57.61 +1 4166282..4167175 - 297 74314287 ilvY SSON_3944 - DNA-binding transcriptional regulator IlvY 3670 54.47 0 4167325..4168800 + 491 74314288 ilvC SSON_3945 - ketol-acid reductoisomerase 3671 50.71 0 4168887..4169168 - 93 74314289 ppiC SSON_3946 - peptidyl-prolyl cis-trans isomerase C 3672 55.19 0 4169690..4170595 - 301 161986413 - SSON_3947 - insertion element IS2 transposase InsD 3673 53.01 0 4170553..4170918 - 121 74314291 - SSON_3948 - insertion sequence 2 OrfA protein 3674 53.86 0 4171369..4173390 + 673 74314292 rep SSON_3949 - ATP-dependent DNA helicase Rep 3675 53.80 0 4173437..4174921 - 494 74314293 gppA SSON_3950 - guanosine pentaphosphate phosphohydrolase 3676 52.05 0 4175055..4176320 - 421 74314294 rhlB SSON_3951 - ATP-dependent RNA helicase RhlB 3677 50.00 0 4176397..4176780 + 127 74314295 trxA SSON_3952 - thioredoxin 3678 49.02 0 4176921..4177022 + 33 74314296 rhoL SSON_3953 - putative Rho operon leader peptide 3679 50.32 0 4177107..4178366 + 419 74314297 rho SSON_3954 - transcription termination factor Rho 3680 41.10 -2 4178376..4178594 + 72 74314298 - SSON_3955 - hypothetical protein 3681 49.37 0 4178606..4179709 + 367 74314299 rfe SSON_3956 - UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase 3682 52.48 0 4179718..4180767 + 349 74314300 wzzE SSON_3957 - lipopolysaccharide biosynthesis protein WzzE 3683 52.26 0 4180781..4181953 + 390 74314301 wecB SSON_3958 - UDP-N-acetyl glucosamine-2-epimerase 3684 53.92 0 4181950..4183212 + 420 74314302 wecC SSON_3959 - UDP-N-acetyl-D-mannosamine dehydrogenase 3685 53.65 0 4183212..4184279 + 355 74314303 rffG SSON_3960 - dTDP-glucose 4,6-dehydratase 3686 55.10 0 4184298..4185179 + 293 74314304 rffH SSON_3961 - glucose-1-phosphate thymidylyltransferase 3687 54.03 0 4185286..4185831 + 181 74314305 wecD SSON_3962 - TDP-fucosamine acetyltransferase 3688 54.64 0 4185836..4186966 + 376 74314306 wecE SSON_3963 - TDP-4-oxo-6-deoxy-D-glucose transaminase 3689 53.40 0 4186968..4188218 + 416 74314307 wzxE SSON_3964 - putative cytochrome 3690 52.41 0 4188215..4189294 + 359 74314308 yifM SSON_3965 - 4-alpha-L-fucosyltransferase 3691 52.70 0 4189291..4190643 + 450 74314309 wecF SSON_3966 - putative entero common antigen polymerase 3692 53.44 0 4190646..4191386 + 246 74314310 wecG SSON_3967 - putative UDP-N-acetyl-D-mannosaminuronic acid transferase 3693 53.10 0 4191577..4192962 + 461 74314311 yifK SSON_3968 - putative transport protein YifK 3694 51.38 0 4193646..4194881 + 411 74314312 aslB SSON_3973 - putative arylsulfatase regulator 3695 54.47 0 4195788..4196984 - 398 74314313 hemY SSON_3974 - putative protoheme IX biogenesis protein 3696 54.19 0 4196987..4198204 - 405 74314314 hemX SSON_3975 - putative uroporphyrinogen III C-methyltransferase 3697 53.04 0 4198226..4198966 - 246 74314315 hemD SSON_3976 - uroporphyrinogen-III synthase 3698 55.45 0 4198963..4199925 - 320 74314316 hemC SSON_3977 - porphobilinogen deaminase 51.65 MEAN 4.20 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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