version 1.0
Shigella sonnei Ss046, complete genome - 1..4825265 4219 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3563 55.19 0 4017595..4018500 - 301 161986417 - SSON_3823 - insertion element IS2 transposase InsD 3564 53.01 0 4018458..4018823 - 121 74314182 - SSON_3824 - insertion sequence 2 OrfA protein 3565 46.53 -1 4019107..4019409 + 100 74314183 - SSON_3825 - IS600 ORF1 3566 52.10 0 4019550..4020263 + 237 74314184 - SSON_3826 - IS600 ORF2 3567 46.79 -1 4020521..4021516 - 331 74314185 yiaH SSON_3827 - hypothetical protein 3568 48.00 0 4021691..4021990 + 99 74314186 - SSON_3828 - putative lipoprotein 3569 55.81 0 4022085..4022996 + 303 74314187 glyQ SSON_3829 - glycyl-tRNA synthetase subunit alpha 3570 55.36 0 4023006..4025075 + 689 74314188 glyS SSON_3830 - glycyl-tRNA synthetase subunit beta 3571 34.64 -2 4025401..4025553 + 50 74314189 yiaZ SSON_3831 - small toxic polypeptide 3572 48.36 0 4025741..4025953 - 70 74314190 cspA SSON_3832 - major cold shock protein 3573 44.33 -1 4026234..4026524 - 96 74314191 yiaG SSON_3833 - putative transcriptional regulator 3574 49.70 0 4026838..4027668 + 276 74314192 yiaF SSON_3834 - hypothetical protein 3575 51.59 0 4027718..4028692 - 324 161986416 yiaE SSON_3835 - putative dehydrogenase 3576 58.48 +1 4028796..4029455 - 219 74314194 yiaD SSON_3836 - putative outer membrane lipoprotein 3577 52.10 0 4029574..4030287 - 237 74314195 - SSON_3837 - IS600 ORF2 3578 46.53 -1 4030429..4030731 - 100 74314196 - SSON_3838 - IS600 ORF1 3579 54.50 0 4030990..4033191 + 733 74314197 bisC SSON_3839 - biotin sulfoxide reductase 3580 52.15 0 4033160..4033600 - 146 74314198 yiaC SSON_3840 - hypothetical protein 3581 49.82 0 4033597..4034160 - 187 74314199 tag SSON_3841 - 3-methyl-adenine DNA glycosylase I 3582 49.79 0 4034312..4035016 + 234 74314200 yhjY SSON_3842 - putative lipase 3583 51.28 0 4035245..4036453 + 402 74314201 yhjX SSON_3843 - putative resistance protein 3584 50.47 0 4036777..4038468 + 563 161986415 yhjW SSON_3844 - phosphoethanolamine transferase 3585 51.80 0 4039717..4041324 + 535 74314203 dppA SSON_3846 - dipeptide transport protein 3586 56.08 +1 4041632..4042651 + 339 74314204 dppB SSON_3847 - dipeptide transporter permease DppB 3587 59.25 +1 4042661..4043563 + 300 74314205 dppC SSON_3848 - dipeptide transporter 3588 56.61 +1 4043574..4044557 + 327 74314206 dppD SSON_3849 - dipeptide transporter ATP-binding subunit 3589 56.22 +1 4044554..4045558 + 334 74314207 dppF SSON_3850 - dipeptide transporter ATP-binding subunit 3590 45.36 -1 4045588..4046859 - 423 74314208 yhjV SSON_3851 - putative transporter protein 3591 52.32 0 4050427..4052106 - 559 74314209 yhjU SSON_3852 - hypothetical protein 3592 47.62 0 4052103..4052291 - 62 74314210 yhjT SSON_3853 - hypothetical protein 3593 48.92 0 4052291..4053862 - 523 74314211 yhjS SSON_3854 - putative protease 3594 54.37 0 4053918..4054421 - 167 74314212 - SSON_3855 - IS1 ORF 3595 46.03 -1 4054869..4055057 + 62 74314213 yhjR SSON_3856 - hypothetical protein 3596 53.64 0 4055093..4055821 + 242 74314214 yhjQ SSON_3857 - cell division protein 3597 54.83 0 4058447..4060786 + 779 74314215 yhjN SSON_3859 - cellulose synthase regulator protein 3598 54.56 0 4060793..4061899 + 368 74314216 yhjM SSON_3860 - endo-1,4-D-glucanase 3599 52.51 0 4065488..4067443 + 651 74314217 yhjK SSON_3862 - putative phosphodiesterase 3600 51.67 0 4067626..4068912 + 428 74314218 dctA SSON_3863 - C4-dicarboxylate transporter DctA 3601 54.11 0 4069132..4070628 + 498 74314219 yhjJ SSON_3864 - hypothetical protein 3602 54.57 0 4070724..4071872 - 382 74314220 kdgK SSON_3865 - ketodeoxygluconokinase 3603 53.05 0 4071882..4072652 + 256 74314221 yhjH SSON_3866 - EAL domain-containing protein 3604 52.99 0 4072707..4074782 + 691 74314222 yhjG SSON_3867 - hypothetical protein 3605 56.01 +1 4074964..4076286 - 440 74314223 yhjE SSON_3868 - putative transport protein 3606 52.96 0 4076697..4077710 - 337 74314224 yhjD SSON_3869 - hypothetical protein 3607 52.06 0 4077759..4078730 - 323 74314225 yhjC SSON_3870 - putative transcriptional regulator LYSR-type 3608 47.93 0 4079178..4079780 + 200 74314226 yhjB SSON_3871 - putative regulator 3609 53.82 0 4079796..4081142 - 448 74314227 - SSON_3872 - IS4 orf 3610 49.51 0 4081274..4082794 + 506 74314228 yieN SSON_3873 - regulatory ATPase RavA 3611 52.82 0 4082788..4084239 + 483 74314229 yieM SSON_3874 - hypothetical protein 3612 56.29 +1 4084244..4085236 - 330 74314230 asnA SSON_3875 - asparagine synthetase AsnA 3613 48.80 0 4085388..4085846 + 152 74314231 asnC SSON_3876 - DNA-binding transcriptional regulator AsnC 3614 49.77 0 4085936..4086379 + 147 74314232 mioC SSON_3877 - flavodoxin 3615 54.50 0 4086758..4088647 + 629 74314233 gidA SSON_3878 - tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 3616 48.72 0 4088711..4089334 + 207 74314234 gidB SSON_3879 - glucose-inhibited division protein B 3617 51.97 0 4089951..4090331 + 126 161986414 atpI SSON_3880 - F0F1 ATP synthase subunit I 3618 50.25 0 4090340..4091155 + 271 74314236 atpB SSON_3881 - F0F1 ATP synthase subunit A 3619 54.17 0 4091202..4091441 + 79 74314237 atpE SSON_3882 - F0F1 ATP synthase subunit C 3620 52.65 0 4091503..4091973 + 156 74314238 atpF SSON_3883 - F0F1 ATP synthase subunit B 3621 51.69 0 4091988..4092521 + 177 74314239 atpH SSON_3884 - F0F1 ATP synthase subunit delta 3622 53.31 0 4092534..4094075 + 513 74314240 atpA SSON_3885 - F0F1 ATP synthase subunit alpha 3623 53.12 0 4094126..4094989 + 287 74314241 atpG SSON_3886 - F0F1 ATP synthase subunit gamma 3624 54.88 0 4095016..4096398 + 460 74314242 atpD SSON_3887 - F0F1 ATP synthase subunit beta 3625 55.24 0 4096419..4096838 + 139 74314243 atpC SSON_3888 - F0F1 ATP synthase subunit epsilon 3626 52.81 0 4097189..4098559 + 456 74314244 glmU SSON_3889 - bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase 3627 53.72 0 4098721..4100550 + 609 74314245 glmS SSON_3890 - D-fructose-6-phosphate amidotransferase 3628 38.53 -2 4100934..4101530 + 198 74314246 - SSON_3891 - putative transposase 3629 44.00 -1 4101517..4103625 + 702 74314247 - SSON_3892 - putative transposase 3630 43.65 -1 4103622..4105289 + 555 74314248 tnsC SSON_3893 - ATP-binding protein 3631 45.19 -1 4105292..4106818 + 508 74314249 tnsD SSON_3894 - transposition protein 3632 42.41 -2 4106927..4108435 + 502 74314250 tnsE SSON_3895 - transposition regulatory protein 3633 53.11 0 4110458..4111246 - 262 74314251 aadA SSON_3896 - aminoglycoside resistance protein 3634 53.90 0 4114725..4116071 + 448 74314252 - SSON_3898 - IS4 orf 3635 47.64 0 4116363..4116935 + 190 74314253 lpfA SSON_3899 - putative major fimbrial subunit 3636 37.62 -2 4116983..4117285 + 100 74314254 - SSON_3900 - putative fimbrial chaperone 3637 54.37 0 4117296..4117799 - 167 74314255 - SSON_3901 - IS1 ORF 3638 54.52 0 4119494..4120333 - 279 74314256 - SSON_3904 - IS911 ORF2 3639 39.39 -2 4122301..4123374 + 357 74314257 - SSON_3905 - putative fimbrial protein 3640 51.30 0 4123622..4124662 + 346 74314258 pstS SSON_3906 - phosphate transporter subunit 3641 54.58 0 4124749..4125708 + 319 74314259 pstC SSON_3907 - phosphate transporter permease subunit 3642 56.90 +1 4125708..4126598 + 296 74314260 pstA SSON_3908 - phosphate transporter permease subunit 3643 52.07 0 4126689..4127462 + 257 74314261 pstB SSON_3909 - phosphate transporter subunit 3644 52.07 0 4127477..4128202 + 241 74314262 phoU SSON_3910 - transcriptional regulator PhoU 3645 42.65 -2 4128488..4129324 + 278 74314263 bglG SSON_3911 - transcriptional antiterminator BglG 3646 51.44 0 4129458..4131335 + 625 74314264 bglF SSON_3912 - beta-glucoside-specific PTS system components IIABC 3647 49.86 0 4131971..4133059 - 362 74314265 - SSON_3914 - putative transposase 3648 45.02 -1 4134352..4135968 + 538 74314266 yieC SSON_3915 - putative receptor protein 3649 53.90 0 4136256..4137602 + 448 74314267 - SSON_3916 - IS4 orf 3650 51.52 0 4137761..4139629 + 622 74314268 trkD SSON_3917 - potassium transport protein Kup 3651 47.15 -1 4139760..4140215 + 151 74314269 rbsD SSON_3918 - D-ribose pyranase 3652 51.26 0 4140223..4141728 + 501 74314270 rbsA SSON_3919 - D-ribose transporter ATP binding protein 3653 53.31 0 4141733..4142698 + 321 74314271 rbsC SSON_3920 - ribose ABC transporter permease protein 3654 52.15 0 4143735..4144664 + 309 74314272 rbsK SSON_3922 - ribokinase 3655 50.55 0 4144668..4145660 + 330 74314273 rbsR SSON_3923 - transcriptional repressor RbsR 3656 49.30 0 4145626..4147053 - 475 74314274 yieO SSON_3924 - putative transport protein 3657 49.73 0 4147076..4147624 - 182 74314275 yieP SSON_3925 - hypothetical protein 3658 48.69 0 4153569..4154408 - 279 74314276 yifDA SSON_3932 - transcriptional regulator HdfR 3659 47.79 0 4154527..4154865 + 112 74314277 yifE SSON_3933 - hypothetical protein 3660 52.63 0 4155340..4156137 - 265 74314278 - SSON_3934 - IS21 ORF2 3661 53.03 0 4156137..4157309 - 390 74314279 - SSON_3935 - IS21 ORF1 3662 54.37 0 4157910..4158413 + 167 74314280 - SSON_3936 - IS1 ORF 51.65 MEAN 4.20 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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