version 1.0
Shigella sonnei Ss046, complete genome - 1..4825265 4219 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2700 53.36 0 3039065..3039973 - 302 74313318 cysD SSON_2900 - sulfate adenylyltransferase subunit 2 2701 49.04 0 3040225..3041262 + 345 74313319 iap SSON_2901 - alkaline phosphatase isozyme conversion aminopeptidase 2702 48.30 0 3041530..3041823 - 97 74313320 ygbF SSON_2902 - hypothetical protein 2703 56.05 +1 3042740..3043144 - 134 74313321 ygcH SSON_2904 - putative cytoplasmic protein 2704 57.73 +1 3043455..3044651 + 398 74313322 - SSON_2905 - ISSfl2 ORF 2705 53.68 0 3044822..3045568 - 248 74313323 - SSON_2906 - putative cytoplasmic protein 2706 49.43 0 3045579..3046634 - 351 74313324 yghJ SSON_2907 - putative cytoplasmic protein 2707 53.26 0 3046646..3046906 - 86 74313325 - SSON_2908 - hypothetical protein 2708 46.20 -1 3047037..3047339 + 100 74313326 - SSON_2909 - IS600 ORF1 2709 52.10 0 3047480..3048193 + 237 74313327 - SSON_2910 - IS600 ORF2 2710 51.39 0 3048234..3048449 - 71 74313328 - SSON_2911 - hypothetical protein 2711 45.76 -1 3048446..3048775 - 109 74313329 - SSON_2912 - hypothetical protein 2712 51.52 0 3048793..3050007 - 404 74313330 - SSON_2913 - putative cytoplasmic protein 2713 50.79 0 3050105..3052762 - 885 74313331 ygcB SSON_2914 - putative helicase 2714 50.20 0 3053416..3054150 - 244 74313332 cysH SSON_2915 - phosphoadenosine phosphosulfate reductase 2715 56.04 +1 3054225..3055937 - 570 74313333 cysI SSON_2916 - sulfite reductase subunit beta 2716 56.83 +1 3055937..3057736 - 599 74313334 cysJ SSON_2917 - sulfite reductase subunit alpha 2717 49.45 0 3058052..3058417 + 121 74313335 ygcM SSON_2918 - putative 6-pyruvoyl tetrahydrobiopterin synthase 2718 55.07 0 3058465..3059766 + 433 74313336 ygcN SSON_2919 - hypothetical protein 2719 55.89 +1 3059721..3060017 + 98 74313337 ygcO SSON_2920 - hypothetical protein 2720 46.70 -1 3060034..3060609 + 191 74313338 ygcP SSON_2921 - putative anti-terminator regulatory protein 2721 55.37 0 3060757..3061650 - 297 74313339 ygcQ SSON_2922 - putative flavoprotein 2722 55.73 0 3061614..3062399 - 261 74313340 ygcR SSON_2923 - putative transport protein 2723 53.19 0 3062371..3063780 - 469 74313341 ygcS SSON_2924 - putative transport protein 2724 50.82 0 3063802..3064596 - 264 74313342 - SSON_2925 - hypothetical protein 2725 49.53 0 3066460..3067737 + 425 74313343 yqcE SSON_2927 - putative transport protein 2726 54.37 0 3069449..3069952 - 167 74313344 - SSON_2929 - IS1 ORF 2727 51.64 0 3070990..3071661 - 223 74313345 ygcF SSON_2930 - hypothetical protein 2728 46.20 -1 3071962..3072264 + 100 74313346 - SSON_2931 - IS600 ORF1 2729 51.96 0 3072405..3073118 + 237 74313347 - SSON_2932 - IS600 ORF2 2730 38.13 -2 3073221..3073970 + 249 74313348 ygcG SSON_2933 - hypothetical protein 2731 54.37 0 3073981..3074484 - 167 74313349 - SSON_2934 - IS1 ORF 2732 53.90 0 3074969..3076315 + 448 74313350 - SSON_2935 - IS4 orf 2733 50.50 0 3076370..3077668 - 432 74313351 eno SSON_2936 - phosphopyruvate hydratase 2734 51.71 0 3077756..3079393 - 545 74313352 pyrG SSON_2937 - CTP synthetase 2735 51.26 0 3079621..3080412 - 263 74313353 mazG SSON_2938 - nucleoside triphosphate pyrophosphohydrolase 2736 46.13 -1 3080483..3080818 - 111 74313354 chpA SSON_2939 - toxin ChpA 2737 48.59 0 3080818..3081066 - 82 74313355 chpR SSON_2940 - antitoxin MazE 2738 53.56 0 3081144..3083378 - 744 74313356 relA SSON_2941 - GDP/GTP pyrophosphokinase 2739 51.23 0 3083426..3084727 - 433 74313357 rumA SSON_2942 - 23S rRNA 5-methyluridine methyltransferase 2740 50.02 0 3084784..3087540 + 918 74313358 barA SSON_2943 - hybrid sensory histidine kinase BarA 2741 53.02 0 3087772..3089112 - 446 74313359 ygcX SSON_2944 - putative glucarate dehydratase 2742 53.84 0 3089133..3090473 - 446 74313360 ygcY SSON_2945 - putative glucarate dehydratase 2743 52.11 0 3090475..3091827 - 450 74313361 - SSON_2946 - putative transport protein 2744 52.00 0 3092262..3092711 - 149 74313362 - SSON_2947 - flavodoxin 2745 53.77 0 3092729..3093511 - 260 74313363 yqcB SSON_2948 - tRNA pseudouridine synthase C 2746 51.52 0 3093511..3093840 - 109 74313364 - SSON_2949 - hypothetical protein 2747 47.99 0 3094462..3095007 - 181 74313365 syd SSON_2950 - SecY interacting protein Syd 2748 48.76 0 3095075..3095923 + 282 74313366 queF SSON_2951 - 7-cyano-7-deazaguanine reductase 2749 51.36 0 3096035..3097399 + 454 74313367 ygdH SSON_2952 - hypothetical protein 2750 52.02 0 3097955..3099244 + 429 74313368 sdaC SSON_2953 - serine transporter 2751 54.46 0 3099302..3100669 + 455 74313369 sdaB SSON_2954 - L-serine dehydratase 2752 52.60 0 3100691..3101536 + 281 74313370 xni SSON_2955 - exonuclease IX 2753 53.47 0 3101641..3102792 - 383 74313371 fucO SSON_2956 - L-1,2-propanediol oxidoreductase 2754 49.38 0 3102817..3103464 - 215 74313372 fucA SSON_2957 - L-fuculose phosphate aldolase 2755 47.46 0 3104011..3105327 + 438 74313373 fucP SSON_2958 - L-fucose transporter 2756 50.66 0 3107214..3108662 + 482 74313374 fucK SSON_2960 - L-fuculokinase 2757 48.70 0 3108664..3109086 + 140 74313375 fucU SSON_2961 - protein of fucose operon 2758 48.22 0 3109144..3109875 + 243 74313376 fucR SSON_2962 - DNA-binding transcriptional activator FucR 2759 52.32 0 3109919..3111019 - 366 74313377 ygdE SSON_2963 - putative RNA 2'-O-ribose methyltransferase 2760 54.29 0 3111012..3111407 - 131 74313378 ygdD SSON_2964 - hypothetical protein 2761 49.46 0 3111426..3112343 - 305 74313379 gcvA SSON_2965 - DNA-binding transcriptional activator GcvA 2762 46.32 -1 3112694..3112924 - 76 74313380 - SSON_2966 - hypothetical protein 2763 55.89 +1 3113113..3114318 + 401 74313381 - SSON_2967 - cysteine sulfinate desulfinase 2764 54.95 0 3114318..3114761 + 147 74313382 ygdK SSON_2968 - hypothetical protein 2765 55.02 0 3114812..3115618 - 268 74313383 ygdL SSON_2969 - putative enzyme 2766 52.82 0 3115695..3116792 - 365 74313384 mltA SSON_2970 - murein transglycosylase A 2767 52.60 0 3117372..3118715 - 447 74313385 - SSON_2974 - putative amidase 2768 52.93 0 3118857..3120188 + 443 74313386 argA SSON_2975 - N-acetylglutamate synthase 2769 55.17 0 3120250..3122076 - 608 74313387 RecD SSON_2976 - exonuclease V subunit alpha 2770 54.67 0 3122076..3125618 - 1180 74313388 RecB SSON_2977 - exonuclease V subunit beta 2771 50.95 0 3125611..3128499 - 962 74313389 ptr SSON_2978 - protease III 2772 53.78 0 3128675..3132043 - 1122 74313390 recC SSON_2979 - exonuclease V subunit gamma 2773 55.25 0 3132056..3132379 - 107 74313391 ppdC SSON_2980 - hypothetical protein 2774 53.92 0 3132364..3132771 - 135 161986462 ygdB SSON_2981 - hypothetical protein 2775 52.13 0 3132768..3133331 - 187 74313393 ppdB SSON_2982 - hypothetical protein 2776 54.14 0 3133322..3133792 - 156 74313394 ppdA SSON_2983 - hypothetical protein 2777 51.07 0 3133977..3134771 - 264 74313395 thyA SSON_2984 - thymidylate synthase 2778 52.97 0 3134778..3135653 - 291 74313396 lgt SSON_2985 - prolipoprotein diacylglyceryl transferase 2779 53.81 0 3135804..3138050 - 748 74313397 ptsP SSON_2986 - fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain-containing protein 2780 49.15 0 3138063..3138593 - 176 74313398 ygdP SSON_2987 - dinucleoside polyphosphate hydrolase 2781 53.62 0 3139278..3139967 + 229 74313399 mutH SSON_2988 - DNA mismatch repair protein 2782 50.70 0 3140036..3140749 + 237 74313400 - SSON_2989 - putative transport protein 2783 43.38 -1 3140887..3141105 + 72 74313401 - SSON_2990 - hypothetical protein 2784 52.10 0 3141198..3141911 - 237 74313402 - SSON_2991 - IS600 ORF2 2785 46.53 -1 3142052..3142354 - 100 74313403 - SSON_2992 - IS600 ORF1 2786 53.82 0 3142462..3143808 + 448 74313404 - SSON_2993 - IS4 orf 2787 54.08 0 3143919..3144959 + 346 74313405 - SSON_2994 - putative aldo-keto reductase 2788 55.53 0 3144991..3146184 - 397 74313406 ygeD SSON_2995 - hypothetical protein 2789 52.64 0 3146177..3148336 - 719 74313407 aas SSON_2996 - bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase 2790 52.62 0 3148922..3149953 + 343 74313408 galR SSON_2997 - DNA-binding transcriptional regulator GalR 2791 52.89 0 3149960..3151222 - 420 74313409 lysA SSON_2998 - diaminopimelate decarboxylase 2792 53.21 0 3151344..3152279 + 311 74313410 lysR SSON_2999 - DNA-binding transcriptional regulator LysR 2793 51.73 0 3153044..3154462 - 472 74313411 araE SSON_3001 - low-affinity L-arabinose transport system proton symport protein 2794 51.57 0 3154779..3155540 - 253 74313412 kduD SSON_3002 - 2-deoxy-D-gluconate 3-dehydrogenase 2795 49.34 0 3155605..3156441 - 278 74313413 kduI SSON_3003 - 5-keto-4-deoxyuronate isomerase 2796 53.72 0 3156728..3157909 - 393 161986461 yqeF SSON_3004 - acetyl-CoA acetyltransferase 2797 44.47 -1 3158164..3159393 + 409 74313415 - SSON_3005 - putative transporter protein 2798 37.52 -2 3159793..3160485 + 230 74313416 yqeH SSON_3006 - hypothetical protein 2799 54.37 0 3161142..3161645 - 167 74313417 - SSON_3008 - IS1 ORF 51.65 MEAN 4.20 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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