IslandPath Analysis: Shigella sonnei Ss046



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 51.65   STD DEV: 4.20
Shigella sonnei Ss046, complete genome - 1..4825265
4219 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2408	 53.21	0	2725776..2726414	+	212	74313026	purN	SSON_2582	-	phosphoribosylglycinamide formyltransferase
2409	 48.57	0	2726585..2728651	+	688	74313027	ppk	SSON_2583	-	polyphosphate kinase
2410	 51.49	0	2728656..2730197	+	513	74313028	ppx	SSON_2584	-	exopolyphosphatase
2411	 46.52	-1	2730236..2732479	-	747	74313029	-	SSON_2585	-	putative cytochrome C-type biogenesis protein
2412	 49.48	0	2732831..2733022	+	63	74313030	-	SSON_2586	-	hypothetical protein
2413	 47.01	-1	2733333..2733851	+	172	74313031	-	SSON_2587	-	putative outer membrane lipoprotein
2414	 49.07	0	2733867..2734406	+	179	74313032	-	SSON_2588	-	hypothetical protein
2415	 54.25	0	2734501..2736078	-	525	74313033	guaA	SSON_2589	-	bifunctional GMP synthase/glutamine amidotransferase protein
2416	 54.46	0	2736147..2737613	-	488	74313034	guaB	SSON_2590	-	inositol-5-monophosphate dehydrogenase
2417	 53.32	0	2737775..2739145	+	456	74313035	xseA	SSON_2591	-	exodeoxyribonuclease VII large subunit
2418	 48.10	0	2739142..2739378	-	78	74313036	-	SSON_2592	-	hypothetical protein
2419	 51.80	0	2739426..2740898	-	490	161986480	engA	SSON_2593	-	GTP-binding protein EngA
2420	 53.18	0	2741016..2742194	-	392	74313038	-	SSON_2594	-	outer membrane protein assembly complex subunit YfgL
2421	 49.28	0	2742205..2742825	-	206	74313039	-	SSON_2595	-	hypothetical protein
2422	 54.51	0	2742843..2744117	-	424	74313040	hisS	SSON_2596	-	histidyl-tRNA synthetase
2423	 53.44	0	2744228..2745346