version 1.0
Shigella sonnei Ss046, complete genome - 1..4825265 4219 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2370 54.39 0 2678164..2680443 - 759 74312988 - SSON_2543 - malic enzyme 2371 50.37 0 2680732..2681682 + 316 74312989 talA SSON_2544 - transaldolase A 2372 54.74 0 2681702..2683705 + 667 74312990 tktB SSON_2545 - transketolase 2373 55.08 0 2683801..2684844 - 347 74312991 - SSON_2546 - hypothetical protein 2374 48.09 0 2684970..2685545 - 191 74312992 yffH SSON_2547 - hypothetical protein 2375 55.66 0 2685613..2687592 - 659 74312993 yffG SSON_2548 - putative oxidoreductase Fe-S binding subunit 2376 51.62 0 2687798..2689498 + 566 74312994 narQ SSON_2549 - nitrate/nitrite sensor protein NarQ 2377 54.37 0 2689662..2692775 + 1037 74312995 acrD SSON_2550 - aminoglycoside/multidrug efflux system 2378 47.34 -1 2693315..2693671 + 118 74312996 yffB SSON_2551 - hypothetical protein 2379 53.28 0 2693675..2694802 + 375 74312997 dapE SSON_2552 - succinyl-diaminopimelate desuccinylase 2380 48.44 0 2694806..2695030 + 74 74312998 - SSON_2553 - hypothetical protein 2381 53.93 0 2695140..2695838 - 232 161986483 ypfH SSON_2554 - esterase YpfH 2382 55.75 0 2695912..2697927 - 671 74313000 ypfI SSON_2555 - hypothetical protein 2383 53.24 0 2697942..2698790 - 282 74313001 - SSON_2556 - hypothetical protein 2384 52.24 0 2698958..2699671 - 237 74313002 purC SSON_2557 - phosphoribosylaminoimidazole-succinocarboxamide synthase 2385 55.30 0 2699884..2700921 - 345 74313003 nlpB SSON_2558 - lipoprotein 2386 51.76 0 2700935..2701813 - 292 74313004 dapA SSON_2559 - dihydrodipicolinate synthase 2387 50.26 0 2701959..2702531 + 190 161986482 gcvR SSON_2560 - glycine cleavage system transcriptional repressor 2388 49.47 0 2702531..2703001 + 156 74313006 bcp SSON_2561 - thioredoxin-dependent thiol peroxidase 2389 56.32 +1 2703215..2703871 + 218 74313007 hyfA SSON_2562 - hydrogenase 4 Fe-S subunit 2390 55.03 0 2703871..2705889 + 672 74313008 hyfB SSON_2563 - hydrogenase 4 subunit B 2391 53.87 0 2705879..2706847 + 322 74313009 hyfC SSON_2564 - hydrogenase 4 membrane subunit 2392 55.20 0 2706986..2708302 + 438 74313010 hyfD SSON_2565 - hydrogenase 4 subunit D 2393 53.46 0 2708314..2708964 + 216 74313011 hyfE SSON_2566 - hydrogenase 4 membrane subunit 2394 54.08 0 2708969..2710549 + 526 74313012 hyfF SSON_2567 - hydrogenase 4 subunit F 2395 54.25 0 2710539..2712254 + 571 74313013 hyfG SSON_2568 - hydrogenase 4 subunit 2396 55.56 0 2712264..2712803 + 179 74313014 hyfH SSON_2569 - hydrogenase 4 subunit H 2397 55.99 +1 2712800..2713558 + 252 74313015 hyfI SSON_2570 - hydrogenase 4 Fe-S subunit 2398 52.62 0 2713488..2713964 + 158 74313016 - SSON_2571 - putative protein processing element 2399 52.76 0 2714015..2716006 + 663 74313017 hyfR SSON_2572 - putative 2-component regulator, interaction with sigma 54 2400 57.81 +1 2716935..2718131 + 398 74313018 - SSON_2574 - ISSfl2 ORF 2401 53.58 0 2718362..2719423 - 353 74313019 perM SSON_2575 - putative permease 2402 54.03 0 2719636..2721099 + 487 74313020 - SSON_2576 - hypothetical protein 2403 52.22 0 2721120..2721479 + 119 74313021 - SSON_2577 - putative oxidoreductase 2404 52.88 0 2721617..2722363 - 248 74313022 - SSON_2578 - DNA replication initiation factor 2405 52.02 0 2722413..2723702 - 429 74313023 uraA SSON_2579 - uracil transporter 2406 53.27 0 2723788..2724414 - 208 161986481 upp SSON_2580 - uracil phosphoribosyltransferase 2407 53.18 0 2724739..2725776 + 345 74313025 purM SSON_2581 - phosphoribosylaminoimidazole synthetase 2408 53.21 0 2725776..2726414 + 212 74313026 purN SSON_2582 - phosphoribosylglycinamide formyltransferase 2409 48.57 0 2726585..2728651 + 688 74313027 ppk SSON_2583 - polyphosphate kinase 2410 51.49 0 2728656..2730197 + 513 74313028 ppx SSON_2584 - exopolyphosphatase 2411 46.52 -1 2730236..2732479 - 747 74313029 - SSON_2585 - putative cytochrome C-type biogenesis protein 2412 49.48 0 2732831..2733022 + 63 74313030 - SSON_2586 - hypothetical protein 2413 47.01 -1 2733333..2733851 + 172 74313031 - SSON_2587 - putative outer membrane lipoprotein 2414 49.07 0 2733867..2734406 + 179 74313032 - SSON_2588 - hypothetical protein 2415 54.25 0 2734501..2736078 - 525 74313033 guaA SSON_2589 - bifunctional GMP synthase/glutamine amidotransferase protein 2416 54.46 0 2736147..2737613 - 488 74313034 guaB SSON_2590 - inositol-5-monophosphate dehydrogenase 2417 53.32 0 2737775..2739145 + 456 74313035 xseA SSON_2591 - exodeoxyribonuclease VII large subunit 2418 48.10 0 2739142..2739378 - 78 74313036 - SSON_2592 - hypothetical protein 2419 51.80 0 2739426..2740898 - 490 161986480 engA SSON_2593 - GTP-binding protein EngA 2420 53.18 0 2741016..2742194 - 392 74313038 - SSON_2594 - outer membrane protein assembly complex subunit YfgL 2421 49.28 0 2742205..2742825 - 206 74313039 - SSON_2595 - hypothetical protein 2422 54.51 0 2742843..2744117 - 424 74313040 hisS SSON_2596 - histidyl-tRNA synthetase 2423 53.44 0 2744228..2745346 - 372 74313041 ispG SSON_2597 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 2424 54.24 0 2745373..2746386 - 337 74313042 yfgA SSON_2598 - hypothetical protein 2425 53.16 0 2746671..2747825 - 384 74313043 yfgB SSON_2599 - hypothetical protein 2426 53.01 0 2747975..2748406 - 143 74313044 ndk SSON_2600 - nucleoside diphosphate kinase 2427 57.07 +1 2748555..2750867 - 770 74313045 pbpC SSON_2601 - penicillin-binding protein 1C 2428 53.02 0 2750868..2755829 - 1653 74313046 - SSON_2602 - hypothetical protein 2429 53.07 0 2756036..2756881 + 281 161986479 sseA SSON_2603 - 3-mercaptopyruvate sulfurtransferase 2430 47.10 -1 2757374..2758150 - 258 161986478 sseB SSON_2604 - enhanced serine sensitivity protein SseB 2431 56.39 +1 2758292..2759575 - 427 161986477 pepB SSON_2605 - aminopeptidase B 2432 49.75 0 2759753..2759953 - 66 74313050 yfhJ SSON_2606 - hypothetical protein 2433 50.89 0 2759965..2760300 - 111 74313051 fdx SSON_2607 - [2FE-2S] ferredoxin, electron carrer protein 2434 57.75 +1 2760302..2762152 - 616 74313052 hscA SSON_2608 - chaperone protein HscA 2435 51.94 0 2762169..2762684 - 171 74313053 hscB SSON_2609 - co-chaperone HscB 2436 51.23 0 2762780..2763103 - 107 74313054 iscA SSON_2610 - iron-sulfur cluster assembly protein 2437 49.61 0 2763120..2763506 - 128 74313055 - SSON_2611 - scaffold protein 2438 52.87 0 2763534..2764772 - 412 74313056 yfhO SSON_2612 - putative aminotransferase 2439 53.17 0 2764989..2765477 - 162 74313057 - SSON_2613 - DNA-binding transcriptional regulator IscR 2440 54.74 0 2765778..2766515 - 245 74313058 - SSON_2614 - putative ATP synthase beta subunit 2441 54.23 0 2766634..2767437 + 267 74313059 suhB SSON_2615 - inositol monophosphatase 2442 49.55 0 2767555..2768436 + 293 74313060 - SSON_2616 - putative enzyme 2443 51.52 0 2768627..2769907 + 426 161986476 csiE SSON_2617 - stationary phase inducible protein CsiE 2444 56.40 +1 2769899..2771038 - 379 74313062 hcaT SSON_2618 - putative 3-phenylpropionic acid transporter 2445 52.72 0 2772224..2773585 + 453 74313063 hcaA1 SSON_2620 - large terminal subunit of phenylpropionate dioxygenase 2446 51.83 0 2773582..2774100 + 172 74313064 hcaA2 SSON_2621 - 3-phenylpropionate dioxygenase subunit beta 2447 55.76 0 2774100..2774420 + 106 74313065 hcaC SSON_2622 - 3-phenylpropionate dioxygenase ferredoxin subunit 2448 56.21 +1 2774417..2775229 + 270 74313066 hcaB SSON_2623 - 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase 2449 54.03 0 2775239..2776441 + 400 74313067 hcaD SSON_2624 - phenylpropionate dioxygenase ferredoxin reductase subunit 2450 54.37 0 2776812..2777315 + 167 74313068 - SSON_2625 - IS1 ORF 2451 54.98 0 2777794..2778666 - 290 74313069 yphB SSON_2627 - hypothetical protein 2452 54.61 0 2778678..2779772 - 364 74313070 yphC SSON_2628 - putative oxidoreductase 2453 55.66 0 2779805..2780803 - 332 74313071 yphD SSON_2629 - putative transport system permease protein 2454 55.49 0 2780828..2782339 - 503 74313072 yphE SSON_2630 - putative ATP-binding component of a transport system 2455 45.53 -1 2782362..2783345 - 327 74313073 yphF SSON_2631 - putative LACI-type transcriptional regulator 2456 53.51 0 2788228..2789481 - 417 74313074 glyA SSON_2634 - serine hydroxymethyltransferase 2457 52.56 0 2789809..2790999 + 396 74313075 hmpA SSON_2635 - nitric oxide dioxygenase 2458 51.03 0 2791044..2791382 - 112 74313076 glnB SSON_2636 - nitrogen regulatory protein P-II 1 2459 54.38 0 2791443..2792777 - 444 74313077 yfhA SSON_2637 - putative 2-component transcriptional regulator 2460 54.20 0 2792767..2793480 - 237 74313078 yfhG SSON_2638 - hypothetical protein 2461 52.58 0 2793645..2795135 - 496 74313079 yfhK SSON_2639 - putative 2-component sensor protein 2462 57.00 +1 2795630..2799517 - 1295 74313080 purL SSON_2640 - phosphoribosylformylglycinamidine synthase 2463 50.46 0 2799913..2801331 + 472 74313081 yfhD SSON_2641 - putative transglycosylase 2464 54.38 0 2801328..2801864 - 178 74313082 yfhC SSON_2642 - tRNA-specific adenosine deaminase 2465 52.36 0 2801889..2802524 - 211 161986475 yfhB SSON_2643 - hypothetical protein 2466 51.83 0 2802733..2803581 + 282 161986474 yfhH SSON_2644 - putative DNA-binding transcriptional regulator 2467 46.25 -1 2804968..2806794 + 608 74313085 ipaH_5 SSON_2646 - invasion plasmid antigen 2468 53.21 0 2806974..2807597 - 207 74313086 - SSON_2647 - hypothetical protein 2469 53.73 0 2807548..2808714 - 388 74313087 - SSON_2648 - putative tail fiber protein 51.65 MEAN 4.20 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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