version 1.0
Shigella sonnei Ss046, complete genome - 1..4825265 4219 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2312 47.48 0 2614318..2615052 + 244 74312929 - SSON_2473 - putative 2-component transcriptional regulator 2313 53.26 0 2615065..2615922 + 285 74312930 - SSON_2474 - putative ARAC-type regulatory protein 2314 56.84 +1 2618445..2619482 - 345 74312931 - SSON_2476 - exoaminopeptidase 2315 54.17 0 2620582..2621829 - 415 74312932 - SSON_2478 - putative transport protein 2316 50.15 0 2621851..2622177 - 108 74312933 - SSON_2479 - putative PTS system enzyme IIB component 2317 50.62 0 2622397..2623362 - 321 74312934 glk SSON_2480 - glucokinase 2318 53.70 0 2623566..2624822 + 418 74312935 - SSON_2481 - hypothetical protein 2319 52.29 0 2624937..2625263 + 108 74312936 - SSON_2482 - hypothetical protein 2320 53.27 0 2625404..2626642 - 412 74312938 - SSON_2484 - manganese transport protein MntH 2321 49.63 0 2626978..2628180 + 400 74312939 nupC SSON_2485 - permease of transport system for 3 nucleosides 2322 50.28 0 2631038..2631397 + 119 74312940 yfeC SSON_2489 - hypothetical protein 2323 46.31 -1 2631399..2631791 + 130 74312941 yfeD SSON_2490 - hypothetical protein 2324 52.68 0 2631843..2633258 - 471 74312942 gltX SSON_2491 - glutamyl-tRNA synthetase 2325 42.69 -2 2634191..2634532 + 113 74312943 flxA SSON_2496 - hypothetical protein 2326 53.72 0 2634523..2635449 - 308 74312944 yfeR SSON_2497 - putative transcriptional regulator LYSR-type 2327 51.75 0 2635539..2636537 + 332 74312945 yfeH SSON_2498 - putative cytochrome oxidase 2328 51.60 0 2636534..2636752 - 72 74312946 ypeB SSON_2499 - putative cytoplasmic protein 2329 54.37 0 2636754..2638769 - 671 74312947 ligA SSON_2500 - NAD-dependent DNA ligase LigA 2330 55.12 0 2638840..2639826 - 328 74312948 zipA SSON_2501 - cell division protein ZipA 2331 50.13 0 2640056..2640817 + 253 74312949 cysZ SSON_2502 - putative sulfate transport protein CysZ 2332 50.10 0 2641002..2641973 + 323 74312950 cysK SSON_2503 - cysteine synthase A 2333 50.78 0 2642357..2642614 + 85 74312951 ptsH SSON_2504 - phosphohistidinoprotein-hexose phosphotransferase component of PTS system (Hpr) 2334 49.65 0 2642659..2644386 + 575 74312952 ptsI SSON_2505 - phosphoenolpyruvate-protein phosphotransferase 2335 47.06 -1 2644427..2644936 + 169 74312953 crr SSON_2506 - glucose-specific PTS system component 2336 53.90 0 2645037..2646383 + 448 74312954 - SSON_2507 - IS4 orf 2337 51.88 0 2646416..2647267 - 283 74312955 pdxK SSON_2508 - pyridoxal kinase 2338 46.88 -1 2647372..2647740 + 122 74312956 yfeK SSON_2509 - hypothetical protein 2339 55.59 0 2647743..2648654 - 303 74312957 cysM SSON_2510 - cysteine synthase B 2340 58.93 +1 2648788..2649885 - 365 74312958 cysA SSON_2511 - sulfate/thiosulfate transporter subunit 2341 56.05 +1 2649875..2650750 - 291 74312959 cysW SSON_2512 - sulfate/thiosulfate transporter permease subunit 2342 55.16 0 2650750..2651583 - 277 74312960 cysU SSON_2513 - sulfate/thiosulfate transporter subunit 2343 53.29 0 2651583..2652599 - 338 74312961 cysP SSON_2514 - thiosulfate transporter subunit 2344 55.43 0 2652770..2653561 - 263 161986487 ucpA SSON_2515 - short chain dehydrogenase 2345 51.40 0 2653690..2654547 - 285 74312963 yfeT SSON_2516 - hypothetical protein 2346 53.73 0 2654711..2655607 + 298 74312964 murQ SSON_2517 - N-acetylmuramic acid-6-phosphate etherase 2347 51.80 0 2657040..2658344 + 434 161986486 - SSON_2519 - hypothetical protein 2348 55.56 0 2658402..2659328 - 308 74312966 - SSON_2520 - hypothetical protein 2349 50.69 0 2659397..2659972 - 191 74312967 - SSON_2521 - hypothetical protein 2350 52.41 0 2660033..2660488 - 151 74312968 yfeZ SSON_2522 - hypothetical protein 2351 51.41 0 2660469..2660894 - 141 161986485 - SSON_2523 - putative acetyltransferase 2352 50.46 0 2661108..2661977 + 289 74312970 amiA SSON_2524 - N-acetylmuramoyl-l-alanine amidase I 2353 54.78 0 2661981..2662880 + 299 74312971 hemF SSON_2525 - coproporphyrinogen III oxidase 2354 53.18 0 2662886..2663938 - 350 74312972 yfeG SSON_2526 - transcriptional regulator EutR 2355 57.99 +1 2663984..2664490 - 168 74312973 - SSON_2527 - hypothetical protein 2356 55.45 0 2664497..2665156 - 219 74312974 - SSON_2528 - ethanolamine utilization protein eutL 2357 56.98 +1 2665166..2666053 - 295 74312975 eutC SSON_2529 - ethanolamine ammonia-lyase small subunit 2358 59.12 +1 2667447..2668850 - 467 74312976 - SSON_2531 - reactivating factor for ethanolamine ammonia lyase 2359 55.01 0 2668847..2670073 - 408 74312977 eutH SSON_2532 - EutH 2360 58.85 +1 2670390..2671604 - 404 74312978 eutG SSON_2533 - hypothetical protein 2361 58.54 +1 2671567..2672403 - 278 74312979 eutJ SSON_2534 - EutJ 2362 57.62 +1 2672414..2673817 - 467 74312980 eutE SSON_2535 - EutE 2363 53.12 0 2673829..2674116 - 95 74312981 cchB SSON_2536 - detox protein 2364 57.82 +1 2674223..2674516 - 97 161986484 cchA SSON_2537 - detox protein 2365 58.01 +1 2674555..2675571 - 338 74312983 eutD SSON_2538 - phosphotransacetylase 2366 58.83 +1 2675568..2676371 - 267 74312984 - SSON_2539 - hypothetical protein 2367 55.56 0 2676368..2677069 - 233 74312985 - SSON_2540 - hypothetical protein 2368 49.79 0 2677044..2677523 - 159 74312986 - SSON_2541 - hypothetical protein 2369 48.53 0 2677536..2677943 - 135 74312987 - SSON_2542 - hypothetical protein 2370 54.39 0 2678164..2680443 - 759 74312988 - SSON_2543 - malic enzyme 2371 50.37 0 2680732..2681682 + 316 74312989 talA SSON_2544 - transaldolase A 2372 54.74 0 2681702..2683705 + 667 74312990 tktB SSON_2545 - transketolase 2373 55.08 0 2683801..2684844 - 347 74312991 - SSON_2546 - hypothetical protein 2374 48.09 0 2684970..2685545 - 191 74312992 yffH SSON_2547 - hypothetical protein 2375 55.66 0 2685613..2687592 - 659 74312993 yffG SSON_2548 - putative oxidoreductase Fe-S binding subunit 2376 51.62 0 2687798..2689498 + 566 74312994 narQ SSON_2549 - nitrate/nitrite sensor protein NarQ 2377 54.37 0 2689662..2692775 + 1037 74312995 acrD SSON_2550 - aminoglycoside/multidrug efflux system 2378 47.34 -1 2693315..2693671 + 118 74312996 yffB SSON_2551 - hypothetical protein 2379 53.28 0 2693675..2694802 + 375 74312997 dapE SSON_2552 - succinyl-diaminopimelate desuccinylase 2380 48.44 0 2694806..2695030 + 74 74312998 - SSON_2553 - hypothetical protein 2381 53.93 0 2695140..2695838 - 232 161986483 ypfH SSON_2554 - esterase YpfH 2382 55.75 0 2695912..2697927 - 671 74313000 ypfI SSON_2555 - hypothetical protein 2383 53.24 0 2697942..2698790 - 282 74313001 - SSON_2556 - hypothetical protein 2384 52.24 0 2698958..2699671 - 237 74313002 purC SSON_2557 - phosphoribosylaminoimidazole-succinocarboxamide synthase 2385 55.30 0 2699884..2700921 - 345 74313003 nlpB SSON_2558 - lipoprotein 2386 51.76 0 2700935..2701813 - 292 74313004 dapA SSON_2559 - dihydrodipicolinate synthase 2387 50.26 0 2701959..2702531 + 190 161986482 gcvR SSON_2560 - glycine cleavage system transcriptional repressor 2388 49.47 0 2702531..2703001 + 156 74313006 bcp SSON_2561 - thioredoxin-dependent thiol peroxidase 2389 56.32 +1 2703215..2703871 + 218 74313007 hyfA SSON_2562 - hydrogenase 4 Fe-S subunit 2390 55.03 0 2703871..2705889 + 672 74313008 hyfB SSON_2563 - hydrogenase 4 subunit B 2391 53.87 0 2705879..2706847 + 322 74313009 hyfC SSON_2564 - hydrogenase 4 membrane subunit 2392 55.20 0 2706986..2708302 + 438 74313010 hyfD SSON_2565 - hydrogenase 4 subunit D 2393 53.46 0 2708314..2708964 + 216 74313011 hyfE SSON_2566 - hydrogenase 4 membrane subunit 2394 54.08 0 2708969..2710549 + 526 74313012 hyfF SSON_2567 - hydrogenase 4 subunit F 2395 54.25 0 2710539..2712254 + 571 74313013 hyfG SSON_2568 - hydrogenase 4 subunit 2396 55.56 0 2712264..2712803 + 179 74313014 hyfH SSON_2569 - hydrogenase 4 subunit H 2397 55.99 +1 2712800..2713558 + 252 74313015 hyfI SSON_2570 - hydrogenase 4 Fe-S subunit 2398 52.62 0 2713488..2713964 + 158 74313016 - SSON_2571 - putative protein processing element 2399 52.76 0 2714015..2716006 + 663 74313017 hyfR SSON_2572 - putative 2-component regulator, interaction with sigma 54 2400 57.81 +1 2716935..2718131 + 398 74313018 - SSON_2574 - ISSfl2 ORF 2401 53.58 0 2718362..2719423 - 353 74313019 perM SSON_2575 - putative permease 2402 54.03 0 2719636..2721099 + 487 74313020 - SSON_2576 - hypothetical protein 2403 52.22 0 2721120..2721479 + 119 74313021 - SSON_2577 - putative oxidoreductase 2404 52.88 0 2721617..2722363 - 248 74313022 - SSON_2578 - DNA replication initiation factor 2405 52.02 0 2722413..2723702 - 429 74313023 uraA SSON_2579 - uracil transporter 2406 53.27 0 2723788..2724414 - 208 161986481 upp SSON_2580 - uracil phosphoribosyltransferase 2407 53.18 0 2724739..2725776 + 345 74313025 purM SSON_2581 - phosphoribosylaminoimidazole synthetase 2408 53.21 0 2725776..2726414 + 212 74313026 purN SSON_2582 - phosphoribosylglycinamide formyltransferase 2409 48.57 0 2726585..2728651 + 688 74313027 ppk SSON_2583 - polyphosphate kinase 2410 51.49 0 2728656..2730197 + 513 74313028 ppx SSON_2584 - exopolyphosphatase 2411 46.52 -1 2730236..2732479 - 747 74313029 - SSON_2585 - putative cytochrome C-type biogenesis protein 51.65 MEAN 4.20 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0