version 1.0
Shigella sonnei Ss046, complete genome - 1..4825265 4219 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1933 50.52 0 2172155..2173213 - 352 74312550 yeeA SSON_2078 - hypothetical protein 1934 46.84 -1 2173411..2173884 - 157 74312551 sbmC SSON_2079 - DNA gyrase inhibitor 1935 49.45 0 2174003..2175175 - 390 74312552 dacD SSON_2080 - D-alanyl-D-alanine carboxypeptidase 1936 50.28 0 2175378..2176805 + 475 74312553 sbcB SSON_2081 - exonuclease I 1937 51.32 0 2176848..2177075 - 75 74312554 yeeD SSON_2082 - hypothetical protein 1938 50.24 0 2177089..2178147 - 352 74312555 yeeE SSON_2083 - putative transport system permease protein 1939 52.31 0 2178326..2179690 - 454 74312556 yeeF SSON_2084 - putative amino acid/amine transport protein 1940 51.21 0 2179951..2180901 - 316 74312557 yeeY SSON_2085 - putative transcriptional regulator LYSR-type 1941 52.00 0 2180926..2181750 - 274 74312558 - SSON_2086 - putative enzyme of sugar metabolism 1942 43.92 -1 2181833..2182087 - 84 74312559 - SSON_2087 - hypothetical protein 1943 47.62 0 2182084..2182335 - 83 74312560 yefM SSON_2088 - antitoxin YefM 1944 43.14 -2 2182618..2182668 + 16 74312561 hisL SSON_2089 - his operon leader peptide 1945 54.44 0 2182814..2183713 + 299 74312562 hisG SSON_2090 - ATP phosphoribosyltransferase 1946 57.39 +1 2183719..2185023 + 434 74312563 hisD SSON_2091 - histidinol dehydrogenase 1947 55.18 0 2185020..2186090 + 356 74312564 hisC SSON_2092 - histidinol-phosphate aminotransferase 1948 53.46 0 2186090..2187157 + 355 161986513 hisB SSON_2093 - imidazole glycerol-phosphate dehydratase/histidinol phosphatase 1949 55.67 0 2187157..2187747 + 196 74312566 hisH SSON_2094 - imidazole glycerol phosphate synthase subunit HisH 1950 57.05 +1 2187747..2188484 + 245 161986512 hisA SSON_2095 - 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 1951 51.87 0 2188466..2189242 + 258 74312568 hisF SSON_2096 - imidazole glycerol phosphate synthase subunit HisF 1952 53.27 0 2189236..2189847 + 203 74312569 hisI SSON_2097 - bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein 1953 45.76 -1 2189944..2190957 - 337 74312570 wzzB SSON_2098 - regulator of length of O-antigen component of lipopolysaccharide chains 1954 43.44 -1 2191067..2192233 - 388 74312571 ugd SSON_2099 - UDP-glucose 6-dehydrogenase 1955 50.82 0 2192483..2193889 - 468 74312572 gnd SSON_2100 - 6-phosphogluconate dehydrogenase 1956 54.56 0 2194053..2195423 - 456 74312573 cpsG SSON_2101 - phosphomannomutase 1957 55.53 0 2195528..2196964 - 478 74312574 cpsB SSON_2102 - mannose-1-phosphate guanyltransferase 1958 55.56 0 2196967..2198190 - 407 74312575 wcaI SSON_2103 - glycosyl transferase 1959 56.11 +1 2198187..2198669 - 160 74312576 wcaH SSON_2104 - GDP-mannose mannosyl hydrolase 1960 56.31 +1 2198669..2199634 - 321 74312577 wcaG SSON_2105 - putative nucleotide di-P-sugar epimerase or dehydratase 1961 54.55 0 2199637..2200758 - 373 74312578 gmd SSON_2106 - GDP-D-mannose dehydratase 1962 47.91 0 2200784..2201332 - 182 74312579 wcaF SSON_2107 - putative colanic acid biosynthesis acetyltransferase WcaF 1963 45.38 -1 2201348..2202094 - 248 74312580 wcaE SSON_2108 - glycosyl transferase 1964 42.69 -2 2202105..2203322 - 405 74312581 wcaD SSON_2109 - putative colanic acid biosynthesis protein 1965 53.78 0 2203297..2204514 - 405 74312582 wcaC SSON_2110 - glycosyl transferase 1966 53.78 0 2204511..2204999 - 162 74312583 wcaB SSON_2111 - putative colanic acid biosynthesis acetyltransferase WcaB 1967 50.48 0 2205002..2205841 - 279 74312584 wcaA SSON_2112 - glycosyl transferase 1968 53.35 0 2205934..2208096 - 720 161986511 - SSON_2113 - tyrosine kinase 1969 53.83 0 2208099..2208542 - 147 74312586 wzb SSON_2114 - tyrosine phosphatase 1970 53.25 0 2208548..2209687 - 379 74312587 wza SSON_2115 - putative polysaccharide export protein 1971 52.42 0 2210280..2211929 + 549 74312588 yegH SSON_2116 - putative transport protein 1972 52.79 0 2212191..2214056 - 621 74312589 asmA SSON_2117 - putative assembly protein 1973 60.14 +2 2214078..2214659 - 193 74312590 dcd SSON_2118 - deoxycytidine triphosphate deaminase 1974 48.91 0 2214751..2215392 - 213 161986510 udk SSON_2119 - uridine kinase 1975 52.50 0 2215710..2219027 + 1105 74312592 yegE SSON_2120 - putative sensor protein 1976 55.01 0 2219137..2219985 - 282 74312593 alkA SSON_2121 - 3-methyl-adenine DNA glycosylase II 1977 56.10 +1 2220119..2221471 + 450 161986509 yegD SSON_2122 - putative chaperone 1978 51.11 0 2221484..2223424 - 646 74312595 - SSON_2123 - putative chaperonin 1979 50.39 0 2223421..2224182 - 253 74312596 - SSON_2124 - hypothetical protein 1980 52.88 0 2224179..2224838 - 219 74312597 - SSON_2125 - hypothetical protein 1981 54.99 0 2226053..2227294 + 413 161986508 - SSON_2126 - multidrug efflux system subunit MdtA 1982 56.39 +1 2227294..2230416 + 1040 74312599 yegN SSON_2127 - multidrug efflux system subunit MdtB 1983 56.53 +1 2230417..2233494 + 1025 74312600 yegO SSON_2128 - multidrug efflux system subunit MdtC 1984 55.51 0 2233495..2234910 + 471 74312601 yegB SSON_2129 - multidrug efflux system protein MdtE 1985 53.42 0 2234907..2236310 + 467 74312602 baeS SSON_2130 - signal transduction histidine-protein kinase BaeS 1986 53.94 0 2236307..2237029 + 240 74312603 baeR SSON_2131 - DNA-binding transcriptional regulator BaeR 1987 54.56 0 2237365..2237868 + 167 74312604 - SSON_2132 - IS1 ORF 1988 47.31 -1 2237958..2238329 + 123 74312605 yegP SSON_2133 - hypothetical protein 1989 53.89 0 2238476..2239837 + 453 74312606 yegQ SSON_2134 - hypothetical protein 1990 37.30 -2 2240167..2240544 - 125 74312607 - SSON_2135 - hypothetical protein 1991 49.67 0 2240890..2241789 + 299 74312608 - SSON_2136 - lipid kinase 1992 46.54 -1 2241871..2242650 - 259 74312609 gatR SSON_2137 - galactitol utilization operon repressor 1993 48.32 0 2242750..2243790 - 346 74312610 gatD SSON_2138 - galactitol-1-phosphate dehydrogenase 1994 50.96 0 2243838..2245193 - 451 74312611 gatC SSON_2139 - PTS system galactitol-specific enzyme IIC 1995 42.46 -2 2245197..2245481 - 94 74312612 gatB SSON_2140 - galactitol-specific PTS system component IIB 1996 54.37 0 2245853..2246356 - 167 74312613 - SSON_2141 - IS1 ORF 1997 52.75 0 2248036..2248890 - 284 161986507 gatY SSON_2144 - tagatose-bisphosphate aldolase 1998 51.28 0 2249209..2250261 - 350 161986506 - SSON_2145 - fructose-bisphosphate aldolase 1999 50.08 0 2250518..2251795 + 425 74312616 yegT SSON_2146 - putative nucleoside permease protein 2000 55.52 0 2251792..2252796 + 334 74312617 - SSON_2147 - hypothetical protein 2001 56.83 +1 2252793..2253758 + 321 74312618 - SSON_2148 - putative kinase 2002 51.54 0 2253732..2254478 - 248 74312619 yegW SSON_2149 - putative transcriptional regulator 2003 47.58 0 2254530..2255357 - 275 74312620 yegX SSON_2150 - hypothetical protein 2004 54.93 0 2255413..2256213 - 266 74312621 thiD SSON_2151 - phosphomethylpyrimidine kinase 2005 54.75 0 2256210..2256998 - 262 74312622 thiM SSON_2152 - hydroxyethylthiazole kinase 2006 47.99 0 2257221..2257493 - 90 74312623 yohL SSON_2153 - hypothetical protein 2007 51.52 0 2257614..2258438 + 274 74312624 yohM SSON_2154 - nickel/cobalt efflux protein RcnA 2008 45.66 -1 2258477..2258995 + 172 74312625 - SSON_2155 - hypothetical protein 2009 38.45 -2 2259077..2260111 - 344 74312626 yehA SSON_2156 - putative type-1 fimbrial protein 2010 54.37 0 2262212..2262715 - 167 74312627 - SSON_2157 - IS1 ORF 2011 39.17 -2 2263400..2264119 - 239 74312628 yehC SSON_2159 - putative chaperone 2012 40.52 -2 2264154..2264696 - 180 74312629 yehD SSON_2160 - putative fimbrial-like protein 2013 44.33 -1 2264939..2265220 - 93 74312630 yehE SSON_2161 - hypothetical protein 2014 53.87 0 2265465..2266574 - 369 161986505 mrp SSON_2162 - putative ATPase 2015 52.95 0 2266706..2268739 + 677 74312632 metG SSON_2163 - methionyl-tRNA synthetase 2016 45.74 -1 2268880..2269701 + 273 74312633 molR_1 SSON_2164 - molybdate metabolism regulator, first fragment 2017 54.37 0 2269636..2270139 - 167 74312634 - SSON_2165 - IS1 ORF 2018 54.42 0 2272434..2274434 + 666 74312635 yehQ SSON_2168 - hypothetical protein 2019 42.19 -2 2274544..2275017 + 157 74312636 yehR SSON_2169 - hypothetical protein 2020 49.26 0 2275058..2275528 - 156 74312637 yehS SSON_2170 - hypothetical protein 2021 49.66 0 2275575..2276309 - 244 74312638 yehT SSON_2171 - putative two-component response-regulatory protein YehT 2022 50.95 0 2276291..2277976 - 561 74312639 yehU SSON_2172 - putative 2-component sensor protein 2023 44.18 -1 2278491..2278739 + 82 74312640 - SSON_2173 - putative DNA damage-inducible protein 2024 54.37 0 2278750..2279253 - 167 74312641 - SSON_2174 - IS1 ORF 2025 47.66 0 2279897..2280259 - 120 74312642 - SSON_2175 - hypothetical protein 2026 50.33 0 2280259..2281023 - 254 74312643 - SSON_2176 - putative transposase 2027 49.26 0 2281150..2281419 - 89 74312644 - SSON_2177 - hypothetical protein 2028 40.97 -2 2281713..2282144 + 143 74312645 - SSON_2178 - hypothetical protein 2029 47.93 0 2282460..2284103 + 547 74312646 ipaH_4 SSON_2179 - invasion plasmid antigen 2030 53.21 0 2284283..2284906 - 207 74312647 - SSON_2180 - hypothetical protein 2031 46.20 -1 2285620..2285922 + 100 74312648 - SSON_2181 - IS600 ORF1 2032 46.42 -1 2286063..2287766 + 567 74312649 - SSON_2182 - putative integrase 51.65 MEAN 4.20 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0