IslandPath Analysis: Shigella sonnei Ss046



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 51.65   STD DEV: 4.20
Shigella sonnei Ss046, complete genome - 1..4825265
4219 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1919	 50.71	0	2162839..2163189	+	116	74312536	pduH	SSON_2064	-	putative propanediol utilization protein: diol dehydratase reactivation
1920	 52.90	0	2163209..2163484	+	91	74312537	pduJ	SSON_2065	-	putative propanediol utilization protein: polyhedral bodies
1921	 55.56	0	2163508..2163930	+	140	74312538	pduK	SSON_2066	-	putative propanediol utilization protein: polyhedral bodies
1922	 52.61	0	2163933..2164565	+	210	74312539	pduL	SSON_2067	-	putative propanediol utilization protein
1923	 47.76	0	2164562..2165053	+	163	74312540	pduM	SSON_2068	-	putative propanediol utilization protein
1924	 56.88	+1	2165057..2165332	+	91	74312541	pduN	SSON_2069	-	putative propanediol utilization protein: polyhedral bodies
1925	 52.78	0	2165344..2166351	+	335	74312542	pduO	SSON_2070	-	putative propanediol utilization protein: B12 related
1926	 51.31	0	2166549..2167733	+	394	74312543	pduP	SSON_2071	-	putative propanediol utilization protein: CoA-dependent propionaldehyde dehydrogenase
1927	 51.30	0	2167744..2168856	+	370	74312544	pduQ	SSON_2072	-	putative propanediol utilization protein: propanol dehydrogenase
1928	 54.26	0	2168853..2169755	+	300	74312545	pduS	SSON_2073	-	putative propanediol utilization protein: ferredoxin
1929	 53.51	0	2170201..2170755	+	184	74312546	pduT	SSON_2074	-	putative propanediol utilization protein: polyhedral bodies
1930	 49.29	0	2170755..2171105	+	116	74312547	pduU	SSON_2075	-	putative propanediol utilization protein: polyhedral bodies
1931	 50.00	0	2171110..2171553	+	147	74312548	pduV	SSON_2076	-	putative propanediol utilization protein
1932	 46.72	-1	2171654..2172049	-	131	74312549	yeeX	SSON_2077	-	hy