IslandPath Analysis: Shigella sonnei Ss046



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 51.65   STD DEV: 4.20
Shigella sonnei Ss046, complete genome - 1..4825265
4219 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1332	 51.50	0	1499750..1502011	-	753	74311949	katE	SSON_1426	-	hydroperoxidase II
1333	 51.52	0	1502194..1502457	+	87	74311950	-	SSON_1427	-	cell division modulator
1334	 52.59	0	1503554..1504945	-	463	74311951	-	SSON_1428	-	kinase fragment
1335	 51.27	0	1505078..1505668	-	196	161986533	-	SSON_1429	-	hypothetical protein
1336	 51.72	0	1505831..1506499	-	222	74311953	yniC	SSON_1430	-	2-deoxyglucose-6-phosphatase
1337	 44.13	-1	1506646..1507182	+	178	74311954	-	SSON_1431	-	hypothetical protein
1338	 51.80	0	1507223..1508083	-	286	74311955	-	SSON_1432	-	hypothetical protein
1339	 43.64	-1	1508189..1508479	-	96	74311956	-	SSON_1433	-	hypothetical protein
1340	 53.98	0	1508580..1509509	-	309	74311957	pfkB	SSON_1434	-	6-phosphofructokinase 2
1341	 49.41	0	1509796..1510554	+	252	74311958	-	SSON_1435	-	hypothetical protein
1342	 47.95	0	1510607..1510825	-	72	74311959	-	SSON_1436	-	hypothetical protein
1343	 54.17	0	1512504..1513007	+	167	74311960	-	SSON_1437	-	IS1 ORF
1344	 49.77	0	1514087..1516015	+	642	74311961	thrS	SSON_1439	-	threonyl-tRNA synthetase
1345	 47.82	0	1516127..1516561	+	144	74311962	infC	SSON_1440	-	translation initiation factor IF-3
1346	 50.00	0	1516658..1516855	+	65	74311963	rpmI	SSON_1441	-	50S ribosomal protein L35
1347	 48.46	0	1516908..1517264	+	118