version 1.0
Shigella sonnei Ss046, complete genome - 1..4825265 4219 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1304 53.27 0 1470601..1471944 - 447 74311921 gdhA SSON_1395 - glutamate dehydrogenase 1305 50.92 0 1472180..1472452 + 90 74311922 - SSON_1396 - hypothetical protein 1306 53.92 0 1472418..1472825 - 135 74311923 - SSON_1397 - pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase 1307 54.37 0 1473432..1473935 + 167 74311924 - SSON_1399 - IS1 ORF 1308 53.67 0 1474317..1475639 - 440 74311925 - SSON_1400 - putative thiosulfate sulfur transferase 1309 52.29 0 1475691..1476344 - 217 74311926 - SSON_1401 - putative ATP-binding component of a transport system 1310 56.04 +1 1477853..1479019 - 388 74311927 - SSON_1403 - hypothetical protein 1311 56.28 +1 1479029..1479577 - 182 74311928 ynjA SSON_1404 - hypothetical protein 1312 51.41 0 1479577..1480284 - 235 74311929 ydjZ SSON_1405 - hypothetical protein 1313 49.64 0 1480299..1481138 - 279 74311930 ydjY SSON_1406 - hypothetical protein 1314 47.69 0 1480981..1481739 - 252 74311931 ydjX SSON_1407 - hypothetical protein 1315 53.16 0 1481858..1482664 - 268 74311932 xthA SSON_1408 - exonuclease III 1316 54.87 0 1483110..1484330 + 406 74311933 cstC SSON_1409 - bifunctional succinylornithine transaminase/acetylornithine transaminase 1317 56.23 +1 1484327..1485361 + 344 74311934 - SSON_1410 - arginine succinyltransferase 1318 55.28 0 1486833..1488176 + 447 74311935 - SSON_1412 - succinylarginine dihydrolase 1319 53.66 0 1488169..1489137 + 322 74311936 ydjS SSON_1413 - succinylglutamate desuccinylase 1320 51.95 0 1489467..1489928 + 153 74311937 spy SSON_1414 - periplasmic protein 1321 54.37 0 1490173..1490676 + 167 74311938 - SSON_1415 - IS1 ORF 1322 51.33 0 1490869..1491507 + 212 74311939 - SSON_1416 - hypothetical protein 1323 51.35 0 1491467..1492354 - 295 74311940 - SSON_1417 - nucleotide excision repair endonuclease 1324 49.28 0 1492584..1493411 - 275 74311941 nadE SSON_1418 - NAD synthetase 1325 48.97 0 1493613..1493951 + 112 74311942 osmE SSON_1419 - DNA-binding transcriptional activator OsmE 1326 43.93 -1 1494250..1494570 + 106 74311943 celA SSON_1420 - N,N'-diacetylchitobiose-specific PTS system transporter subunit IIB 1327 49.45 0 1494655..1496013 + 452 74311944 celB SSON_1421 - N,N'-diacetylchitobiose-specific PTS system transporter subunit IIC 1328 49.29 0 1496064..1496414 + 116 74311945 celC SSON_1422 - N,N'-diacetylchitobiose-specific PTS system transporter subunit IIA 1329 41.64 -2 1496422..1497264 + 280 74311946 celD SSON_1423 - DNA-binding transcriptional regulator ChbR 1330 46.78 -1 1497369..1498721 + 450 74311947 celF SSON_1424 - cryptic phospho-beta-glucosidase 1331 50.59 0 1498734..1499492 + 252 74311948 ydjC SSON_1425 - hypothetical protein 1332 51.50 0 1499750..1502011 - 753 74311949 katE SSON_1426 - hydroperoxidase II 1333 51.52 0 1502194..1502457 + 87 74311950 - SSON_1427 - cell division modulator 1334 52.59 0 1503554..1504945 - 463 74311951 - SSON_1428 - kinase fragment 1335 51.27 0 1505078..1505668 - 196 161986533 - SSON_1429 - hypothetical protein 1336 51.72 0 1505831..1506499 - 222 74311953 yniC SSON_1430 - 2-deoxyglucose-6-phosphatase 1337 44.13 -1 1506646..1507182 + 178 74311954 - SSON_1431 - hypothetical protein 1338 51.80 0 1507223..1508083 - 286 74311955 - SSON_1432 - hypothetical protein 1339 43.64 -1 1508189..1508479 - 96 74311956 - SSON_1433 - hypothetical protein 1340 53.98 0 1508580..1509509 - 309 74311957 pfkB SSON_1434 - 6-phosphofructokinase 2 1341 49.41 0 1509796..1510554 + 252 74311958 - SSON_1435 - hypothetical protein 1342 47.95 0 1510607..1510825 - 72 74311959 - SSON_1436 - hypothetical protein 1343 54.17 0 1512504..1513007 + 167 74311960 - SSON_1437 - IS1 ORF 1344 49.77 0 1514087..1516015 + 642 74311961 thrS SSON_1439 - threonyl-tRNA synthetase 1345 47.82 0 1516127..1516561 + 144 74311962 infC SSON_1440 - translation initiation factor IF-3 1346 50.00 0 1516658..1516855 + 65 74311963 rpmI SSON_1441 - 50S ribosomal protein L35 1347 48.46 0 1516908..1517264 + 118 74311964 rplT SSON_1442 - 50S ribosomal protein L20 1348 35.56 -2 1517387..1517431 + 14 74311965 - SSON_1443 - hypothetical protein 1349 53.96 0 1517714..1518697 + 327 74311966 pheS SSON_1444 - phenylalanyl-tRNA synthetase subunit alpha 1350 53.85 0 1518712..1521099 + 795 74311967 pheT SSON_1445 - phenylalanyl-tRNA synthetase subunit beta 1351 50.00 0 1521104..1521403 + 99 74311968 ihfA SSON_1446 - integration host factor subunit alpha 1352 55.25 0 1521504..1522484 + 326 74311969 btuC SSON_1447 - vtamin B12-transporter permease 1353 49.46 0 1522547..1523098 + 183 74311970 btuE SSON_1448 - putative glutathione peroxidase 1354 54.40 0 1523098..1523847 + 249 74311971 btuD SSON_1449 - vitamin B12-transporter ATPase 1355 49.03 0 1523925..1524389 + 154 74311972 nlpC SSON_1450 - lipoprotein 1356 52.91 0 1524490..1525521 + 343 74311973 - SSON_1451 - IS630 orf 1357 42.44 -2 1525791..1526504 + 237 74311974 - SSON_1452 - hypothetical protein 1358 52.40 0 1526567..1528003 + 478 74311975 - SSON_1453 - hypothetical protein 1359 51.56 0 1528007..1528198 - 63 74311976 ydiE SSON_1454 - hypothetical protein 1360 52.91 0 1528330..1529376 - 348 74311977 aroH SSON_1455 - phospho-2-dehydro-3-deoxyheptonate aldolase 1361 50.72 0 1529533..1530366 - 277 74311978 ydiA SSON_1456 - hypothetical protein 1362 54.85 0 1530699..1533077 + 792 74311979 ppsA SSON_1457 - phosphoenolpyruvate synthase 1363 54.37 0 1533749..1534252 + 167 74311980 - SSON_1459 - IS1 ORF 1364 50.72 0 1534974..1535732 - 252 74311981 aroD SSON_1461 - 3-dehydroquinate dehydratase 1365 47.75 0 1535763..1536629 - 288 74311982 ydiB SSON_1462 - quinate/shikimate dehydrogenase 1366 45.52 -1 1536641..1537912 - 423 74311983 - SSON_1463 - putative amino acid/amine transport protein 1367 54.37 0 1538477..1538980 - 167 74311984 - SSON_1464 - IS1 ORF 1368 45.31 -1 1540224..1540607 - 127 74311985 - SSON_1466 - hypothetical protein 1369 54.17 0 1540933..1541436 - 167 74311986 - SSON_1467 - IS1 ORF 1370 54.99 0 1541786..1542898 - 370 74311987 - SSON_1468 - putative inner membrane protein 1371 53.78 0 1543287..1546343 + 1018 74311988 ydiJ SSON_1469 - putative oxidase 1372 50.85 0 1546340..1546750 + 136 74311989 - SSON_1470 - hypothetical protein 1373 44.07 -1 1546769..1547038 + 89 74311990 - SSON_1471 - hypothetical protein 1374 53.39 0 1547586..1547954 + 122 74311991 sufA SSON_1472 - iron-sulfur cluster assembly scaffold protein 1375 51.54 0 1547924..1549450 + 508 74311992 ynhE SSON_1473 - cysteine desulfurase activator complex subunit SufB 1376 50.47 0 1549460..1550206 + 248 74311993 sufC SSON_1474 - cysteine desulfurase ATPase component 1377 52.83 0 1550181..1551452 + 423 74311994 ynhC SSON_1475 - cysteine desulfurase activator complex subunit SufD 1378 54.87 0 1551449..1552669 + 406 74311995 - SSON_1476 - selenocysteine lyase 1379 48.92 0 1552682..1553098 + 138 74311996 ynhA SSON_1477 - cysteine desufuration protein SufE 1380 51.54 0 1553247..1554251 + 334 74311997 ynhG SSON_1478 - hypothetical protein 1381 50.63 0 1554314..1554550 - 78 74311998 lpp SSON_1479 - murein lipoprotein 1382 50.11 0 1554860..1556272 - 470 74311999 pykF SSON_1480 - pyruvate kinase 1383 46.67 -1 1556829..1557038 + 69 74312000 - SSON_1481 - hypothetical protein 1384 49.28 0 1557494..1558120 + 208 74312001 - SSON_1482 - hypothetical protein 1385 48.17 0 1558141..1560249 + 702 74312002 - SSON_1483 - putative oxidoreductase 1386 52.47 0 1560253..1560900 + 215 74312003 - SSON_1484 - hypothetical protein 1387 49.86 0 1560913..1561632 + 239 74312004 - SSON_1485 - putative oxidoreductase, Fe-S subunit 1388 49.24 0 1561629..1562414 + 261 74312005 ydhU SSON_1486 - hypothetical protein 1389 52.77 0 1562418..1563230 + 270 74312006 - SSON_1487 - hypothetical protein 1390 47.79 0 1563242..1564846 - 534 74312007 - SSON_1488 - hypothetical protein 1391 44.77 -1 1564972..1565277 - 101 74312008 - SSON_1489 - hypothetical protein 1392 51.79 0 1565850..1567106 + 418 74312009 - SSON_1492 - hypothetical protein 1393 52.77 0 1567147..1568520 - 457 74312010 ydhE SSON_1493 - multidrug efflux protein 1394 47.51 0 1568735..1569376 + 213 74312011 ribE SSON_1494 - riboflavin synthase subunit alpha 1395 48.30 0 1569416..1570564 - 382 74312012 cfa SSON_1495 - cyclopropane fatty acyl phospholipid synthase 1396 53.30 0 1570855..1572066 - 403 74312013 ydhC SSON_1496 - inner membrane transport protein YdhC 1397 53.80 0 1572179..1573111 + 310 74312014 ydhB SSON_1497 - putative DNA-binding transcriptional regulator 1398 53.12 0 1573108..1574133 - 341 74312015 purR SSON_1498 - DNA-binding transcriptional repressor PurR 1399 53.93 0 1574687..1575856 + 389 74312016 - SSON_1499 - putative transport protein 1400 49.83 0 1576002..1576583 - 193 74312017 sodB SSON_1500 - superoxide dismutase 1401 47.79 0 1576711..1577526 - 271 74312018 ydhO SSON_1501 - putative lipoprotein 1402 52.30 0 1577860..1578207 + 115 74312019 ydhD SSON_1502 - hypothetical protein 1403 54.63 0 1582920..1583567 - 215 74312020 rnt SSON_1504 - ribonuclease T 51.65 MEAN 4.20 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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