version 1.0
Shigella sonnei Ss046, complete genome - 1..4825265 4219 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1179 46.53 -1 1342392..1342694 + 100 74311796 - SSON_1267 - IS600 ORF1 1180 54.17 0 1342857..1343360 - 167 74311797 - SSON_1268 - IS1 ORF 1181 51.96 0 1343612..1344325 + 237 74311798 - SSON_1269 - IS600 ORF2 1182 53.56 0 1344353..1345306 + 317 74311799 - SSON_1270 - putative phage tail fiber protein 1183 52.56 0 1345257..1345880 + 207 74311800 - SSON_1271 - hypothetical protein 1184 46.92 -1 1346060..1347811 - 583 74311801 ipaH_2 SSON_1272 - invasion plasmid antigen 1185 44.18 -1 1348412..1348660 - 82 74311802 - SSON_1273 - hypothetical protein 1186 52.91 0 1349015..1349581 - 188 161986539 yecD SSON_1274 - hypothetical protein 1187 53.75 0 1349891..1351663 + 590 74311804 aspS SSON_1275 - aspartyl-tRNA synthetase 1188 52.54 0 1351781..1352233 + 150 74311805 ntpA SSON_1276 - dATP pyrophosphohydrolase 1189 52.23 0 1352262..1353002 + 246 74311806 yebC SSON_1277 - hypothetical protein 1190 54.98 0 1353037..1353558 + 173 74311807 ruvC SSON_1278 - Holliday junction resolvase 1191 43.78 -1 1353560..1354162 - 200 161986538 yebB SSON_1279 - hypothetical protein 1192 52.94 0 1354440..1355051 + 203 74311809 ruvA SSON_1280 - Holliday junction DNA helicase motor protein 1193 53.21 0 1355060..1356070 + 336 74311810 ruvB SSON_1281 - Holliday junction DNA helicase B 1194 51.15 0 1356217..1357002 - 261 74311811 znuB SSON_1282 - high-affinity zinc transporter membrane component 1195 49.21 0 1356999..1357754 - 251 74311812 znuC SSON_1283 - high-affinity zinc transporter ATPase 1196 49.20 0 1357833..1358765 + 310 161986537 znuA SSON_1284 - high-affinity zinc transporter periplasmic component 1197 52.76 0 1358781..1360103 + 440 161986536 yebA SSON_1285 - hypothetical protein 1198 50.93 0 1360223..1361194 + 323 74311815 msbB SSON_1286 - lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 1199 37.81 -2 1361414..1362709 - 431 74311816 - SSON_1287 - hypothetical protein 1200 54.37 0 1362755..1363258 - 167 74311817 - SSON_1288 - IS1 ORF 1201 39.99 -2 1363481..1365133 - 550 74311818 - SSON_1289 - putative alpha-mannosidase 1202 37.29 -2 1365170..1367038 - 622 74311819 - SSON_1290 - hypothetical protein 1203 34.58 -2 1367127..1367366 - 79 74311820 - SSON_1291 - hypothetical protein 1204 54.37 0 1367682..1368185 + 167 74311821 - SSON_1292 - IS1 ORF 1205 37.13 -2 1368306..1369148 + 280 74311822 - SSON_1293 - hypothetical protein 1206 52.53 0 1369208..1370650 - 480 74311823 pykA SSON_1294 - pyruvate kinase 1207 48.85 0 1370778..1371647 - 289 74311824 yebK SSON_1295 - DNA-binding transcriptional regulator HexR 1208 51.56 0 1371985..1373460 + 491 74311825 zwf SSON_1296 - glucose-6-phosphate 1-dehydrogenase 1209 53.75 0 1373695..1375506 + 603 74311826 edd SSON_1297 - phosphogluconate dehydratase 1210 55.92 +1 1375543..1376184 + 213 74311827 eda SSON_1298 - keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase 1211 53.77 0 1376240..1377418 - 392 74311828 purT SSON_1299 - phosphoribosylglycinamide formyltransferase 2 1212 49.48 0 1377552..1377842 + 96 74311829 yebG SSON_1300 - DNA damage-inducible protein YebG 1213 49.05 0 1377897..1378265 + 122 74311830 yebF SSON_1301 - hypothetical protein 1214 52.58 0 1378592..1379251 + 219 74311831 yebE SSON_1302 - hypothetical protein 1215 49.64 0 1379459..1381519 + 686 74311832 ptrB SSON_1303 - protease 2 1216 52.19 0 1381516..1382178 - 220 74311833 - SSON_1304 - exodeoxyribonuclease X 1217 51.90 0 1382202..1382858 - 218 74311834 - SSON_1305 - hypothetical protein 1218 48.48 0 1382960..1383190 - 76 74311835 holE SSON_1306 - DNA polymerase III subunit theta 1219 49.87 0 1383329..1383703 + 124 74311836 - SSON_1307 - hypothetical protein 1220 53.04 0 1383707..1384579 + 290 74311837 - SSON_1308 - putative resistance protein 1221 45.91 -1 1384592..1384933 + 113 74311838 - SSON_1309 - hypothetical protein 1222 42.34 -2 1385326..1386402 - 358 74311839 - SSON_1310 - putative phage integrase protein 1223 51.22 0 1386439..1386684 - 81 74311840 - SSON_1311 - IS1 ORF 1224 54.94 0 1386695..1387555 - 286 161986535 - SSON_1312 - insertion element IS2 transposase InsD 1225 53.01 0 1387513..1387878 - 121 74311842 - SSON_1313 - insertion sequence 2 OrfA protein 1226 56.93 +1 1387967..1388233 - 88 74311843 - SSON_1314 - IS1 ORF 1227 45.87 -1 1388861..1389163 + 100 74311844 - SSON_1315 - IS600 ORF1 1228 52.10 0 1389304..1390017 + 237 74311845 - SSON_1316 - IS600 ORF2 1229 49.01 0 1390133..1391848 - 571 74311846 ipaH_3 SSON_1317 - invasion plasmid antigen 1230 51.68 0 1392050..1392763 - 237 74311847 - SSON_1318 - IS600 ORF2 1231 46.20 -1 1392904..1393206 - 100 74311848 - SSON_1319 - IS600 ORF1 1232 54.37 0 1394044..1394547 - 167 74311849 - SSON_1320 - IS1 ORF 1233 46.20 -1 1395159..1395461 + 100 74311850 - SSON_1322 - IS600 ORF1 1234 51.82 0 1395602..1396315 + 237 74311851 - SSON_1323 - IS600 ORF2 1235 46.01 -1 1396558..1396833 - 91 74311852 - SSON_1324 - hypothetical protein 1236 54.56 0 1397264..1397767 + 167 74311853 - SSON_1325 - IS1 ORF 1237 52.42 0 1397985..1399430 - 481 74311854 yebU SSON_1326 - rRNA (cytosine-C(5)-)-methyltransferase RsmF 1238 53.07 0 1399505..1402144 - 879 74311855 - SSON_1327 - hypothetical protein 1239 50.55 0 1402107..1403390 - 427 74311856 - SSON_1328 - hypothetical protein 1240 48.19 0 1403466..1404017 + 183 74311857 - SSON_1329 - hypothetical protein 1241 53.08 0 1404114..1404812 + 232 74311858 proQ SSON_1330 - putative solute/DNA competence effector 1242 50.71 0 1404832..1406880 + 682 74311859 prc SSON_1331 - carboxy-terminal protease 1243 53.17 0 1407072..1407953 + 293 74311860 htpX SSON_1332 - heat shock protein HtpX 1244 49.62 0 1409239..1410030 + 263 74311861 - SSON_1334 - putative regulator 1245 46.53 -1 1410571..1410714 + 47 74311862 - SSON_1335 - hypothetical protein 1246 43.40 -1 1410789..1411076 + 95 74311863 - SSON_1336 - hypothetical protein 1247 47.14 -1 1411903..1412112 + 69 74311864 cspC SSON_1337 - cold shock-like protein CspC 1248 51.11 0 1412278..1413087 + 269 74311865 rrmA SSON_1338 - 23S rRNA methyltransferase A 1249 51.53 0 1413084..1413704 - 206 74311866 - SSON_1339 - hypothetical protein 1250 45.10 -1 1414081..1414539 - 152 74311867 - SSON_1340 - hypothetical protein 1251 52.85 0 1414594..1415454 - 286 74311868 manZ SSON_1341 - mannose-specific PTS system protein IID 1252 51.56 0 1415458..1416258 - 266 74311869 manY SSON_1342 - PTS enzyme IIC, mannose-specific 1253 50.21 0 1416321..1417292 - 323 74311870 manX SSON_1343 - PTS enzyme IIAB, mannose-specific 1254 53.77 0 1417755..1419305 + 516 74311871 yoaE SSON_1344 - putative transport protein 1255 50.64 0 1419309..1420937 - 542 74311872 - SSON_1345 - hypothetical protein 1256 53.77 0 1421038..1422402 - 454 74311873 sdaA SSON_1346 - L-serine deaminase 1257 54.40 0 1422586..1423164 - 192 74311874 yeaB SSON_1347 - hypothetical protein 1258 50.44 0 1423168..1424529 - 453 74311875 pabB SSON_1348 - p-aminobenzoate synthetase, component I 1259 55.00 0 1424603..1424782 + 59 74311876 - SSON_1349 - hypothetical protein 1260 44.33 -1 1424902..1425201 - 99 74311877 - SSON_1350 - hypothetical protein 1261 54.37 0 1425274..1425777 - 167 74311878 - SSON_1351 - IS1 ORF 1262 50.38 0 1426399..1426791 - 130 74311879 - SSON_1352 - hypothetical protein 1263 55.26 0 1426875..1428785 + 636 74311880 yoaA SSON_1353 - putative enzyme 1264 55.46 0 1428843..1429538 + 231 74311881 yeaZ SSON_1354 - hypothetical protein 1265 50.52 0 1429578..1430159 + 193 74311882 - SSON_1355 - putative outer membrane protein 1266 51.19 0 1430364..1432049 + 561 74311883 fadD SSON_1356 - long-chain-fatty-acid--CoA ligase 1267 53.99 0 1432119..1433246 + 375 74311884 rnd SSON_1357 - ribonuclease D 1268 50.62 0 1433300..1434265 - 321 74311885 yeaX SSON_1358 - putative diogenase beta subunit 1269 51.73 0 1434321..1435445 - 374 74311886 yeaW SSON_1359 - hypothetical protein 1270 50.83 0 1435477..1436922 - 481 74311887 yeaV SSON_1360 - putative transporter 1271 53.68 0 1437338..1438423 - 361 74311888 yeaU SSON_1361 - putative tartrate dehydrogenase 1272 51.96 0 1438505..1439449 + 314 74311889 yeaT SSON_1362 - putative transcriptional regulator LYSR-type 1273 45.38 -1 1439576..1440214 + 212 74311890 yeaS SSON_1363 - leucine export protein LeuE 1274 48.61 0 1440387..1440746 + 119 74311891 yeaR SSON_1364 - hypothetical protein 1275 45.90 -1 1440750..1440932 + 60 74311892 yoaG SSON_1365 - hypothetical protein 1276 46.18 -1 1441080..1441328 + 82 74311893 yeaQ SSON_1366 - hypothetical protein 1277 46.58 -1 1441595..1442749 - 384 74311894 yeaP SSON_1367 - hypothetical protein 1278 51.76 0 1442803..1443057 + 84 74311895 yoaF SSON_1368 - hypothetical protein 51.65 MEAN 4.20 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0