IslandPath Analysis: Shigella sonnei Ss046



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 51.65   STD DEV: 4.20
Shigella sonnei Ss046, complete genome - 1..4825265
4219 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1158	 49.91	0	1318567..1319139	+	190	74311775	yecM	SSON_1243	-	hypothetical protein
1159	 52.07	0	1319153..1319899	+	248	74311776	cutC	SSON_1244	-	copper homeostasis protein CutC
1160	 47.50	0	1320287..1321387	+	366	74311777	yecK	SSON_1245	-	putative cytochrome C-type protein
1161	 46.20	-1	1321578..1321880	+	100	74311778	-	SSON_1246	-	IS600 ORF1
1162	 51.96	0	1322021..1322734	+	237	74311779	-	SSON_1247	-	IS600 ORF2
1163	 51.35	0	1322817..1325108	+	763	74311780	bisZ	SSON_1248	-	biotin sulfoxide reductase 2
1164	 52.16	0	1325273..1326244	-	323	74311781	yecP	SSON_1249	-	putative enzyme
1165	 50.27	0	1326241..1326984	-	247	74311782	yecO	SSON_1250	-	hypothetical protein
1166	 49.49	0	1327025..1327420	-	131	161986541	yecN	SSON_1251	-	hypothetical protein
1167	 43.30	-1	1328407..1328958	+	183	74311784	-	SSON_1253	-	putative resolvase
1168	 38.13	-2	1330868..1331242	+	124	74311785	-	SSON_1254	-	hypothetical protein
1169	 46.53	-1	1334146..1334448	+	100	74311786	-	SSON_1255	-	IS600 ORF1
1170	 52.10	0	1334589..1335302	+	237	74311787	-	SSON_1256	-	IS600 ORF2
1171	 48.68	0	1335299..1335487	-	62	74311788	-	SSON_1257	-	hypothetical protein
1172	 48.89	0	1337335..1338189	-	284	74311789	-	SSON_1260	-	antitermination protein Q
1173	 48.53	0	1338186..1338560	-	124