version 1.0
Shigella sonnei Ss046, complete genome - 1..4825265 4219 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1012 49.40 0 1166867..1167451 + 194 74311628 rimJ SSON_1086 - ribosomal-protein-S5-alanine N-acetyltransferase 1013 52.16 0 1167462..1168109 + 215 74311629 yceH SSON_1087 - hypothetical protein 1014 54.33 0 1168111..1169034 + 307 74311630 mviM SSON_1088 - putative virulence factor 1015 53.58 0 1169144..1170679 + 511 74311631 mviN SSON_1089 - putative virulence factor 1016 47.96 0 1170719..1171135 - 138 74311632 flgN SSON_1090 - protein of flagellar biosynthesis 1017 52.04 0 1171140..1171433 - 97 74311633 flgM SSON_1091 - anti-sigma28 factor FlgM 1018 52.73 0 1171509..1172168 - 219 74311634 flgA SSON_1092 - flagellar basal body P-ring biosynthesis protein FlgA 1019 53.48 0 1172323..1172739 + 138 74311635 flgB SSON_1093 - flagellar basal body rod protein FlgB 1020 53.33 0 1172743..1173147 + 134 74311636 flgC SSON_1094 - flagellar basal body rod protein FlgC 1021 54.89 0 1173159..1173854 + 231 74311637 flgD SSON_1095 - flagellar basal body rod modification protein 1022 51.58 0 1173879..1175084 + 401 74311638 flgE SSON_1096 - flagellar hook protein FlgE 1023 58.99 +1 1175104..1175859 + 251 74311639 flgF SSON_1097 - flagellar basal body rod protein FlgF 1024 53.51 0 1176856..1177554 + 232 74311640 flgH SSON_1099 - flagellar basal body L-ring protein 1025 54.01 0 1177566..1178663 + 365 74311641 flgI SSON_1100 - flagellar basal body P-ring protein 1026 54.46 0 1178663..1179604 + 313 74311642 flgJ SSON_1101 - peptidoglycan hydrolase 1027 51.76 0 1179670..1181313 + 547 74311643 flgK SSON_1102 - flagellar hook-associated protein FlgK 1028 50.73 0 1181325..1182278 + 317 74311644 flgL SSON_1103 - flagellar hook-associated protein FlgL 1029 55.65 0 1182473..1185658 - 1061 74311645 rne SSON_1104 - ribonuclease E 1030 46.40 -1 1185739..1186113 + 124 74311646 - SSON_1105 - hypothetical protein 1031 51.56 0 1186231..1187190 + 319 74311647 yceC SSON_1106 - 23S rRNA pseudouridylate synthase C 1032 50.09 0 1187302..1187886 - 194 161986551 yceF SSON_1107 - Maf-like protein 1033 49.43 0 1188085..1188606 + 173 74311649 yceD SSON_1108 - hypothetical protein 1034 54.02 0 1188658..1188831 + 57 74311650 rpmF SSON_1109 - 50S ribosomal protein L32 1035 51.91 0 1188912..1189982 + 356 161986550 plsX SSON_1110 - putative glycerol-3-phosphate acyltransferase PlsX 1036 54.82 0 1190050..1191003 + 317 74311652 fabH SSON_1111 - 3-oxoacyl-(acyl carrier protein) synthase III 1037 55.05 0 1191019..1191948 + 309 74311653 fabD SSON_1112 - malonyl-CoA-[acyl-carrier-protein] transacylase 1038 51.70 0 1191961..1192695 + 244 74311654 fabG SSON_1113 - 3-ketoacyl-(acyl-carrier-protein) reductase 1039 48.10 0 1192906..1193142 + 78 74311655 acpP SSON_1114 - acyl carrier protein 1040 53.30 0 1193230..1194471 + 413 74311656 fabF SSON_1115 - 3-oxoacyl-(acyl carrier protein) synthase II 1041 50.49 0 1194591..1195400 + 269 74311657 pabC SSON_1116 - 4-amino-4-deoxychorismate lyase 1042 50.93 0 1195403..1196425 + 340 74311658 yceG SSON_1117 - hypothetical protein 1043 53.74 0 1196415..1197056 + 213 74311659 tdk SSON_1118 - thymidylate kinase 1044 54.13 0 1197053..1198057 + 334 74311660 holB SSON_1119 - DNA polymerase III subunit delta' 1045 50.63 0 1198068..1198865 + 265 74311661 ycfH SSON_1120 - putative metallodependent hydrolase 1046 52.51 0 1199160..1200593 + 477 74311662 ptsG SSON_1121 - glucose-specific PTS system IIBC components 1047 49.73 0 1200653..1202842 - 729 74311663 fhuE SSON_1122 - ferric-rhodotorulic acid outer membrane transporter 1048 50.56 0 1203176..1203535 + 119 74311664 ycfF SSON_1123 - purine nucleoside phosphoramidase 1049 50.00 0 1203538..1203915 + 125 74311665 ycfL SSON_1124 - hypothetical protein 1050 56.39 +1 1203929..1204570 + 213 74311666 ycfM SSON_1125 - hypothetical protein 1051 53.09 0 1204551..1205375 + 274 74311667 thiK SSON_1126 - thiamine kinase 1052 52.73 0 1205386..1206411 + 341 74311668 ycfO SSON_1127 - beta-hexosaminidase 1053 47.51 0 1206434..1206976 + 180 161986549 ycfP SSON_1128 - hypothetical protein 1054 52.34 0 1207384..1208688 + 434 74311670 ndh SSON_1129 - respiratory NADH dehydrogenase 1055 53.33 0 1208915..1209454 + 179 74311671 ycfJ SSON_1130 - hypothetical protein 1056 50.07 0 1209516..1210226 - 236 74311672 ycfQ SSON_1131 - hypothetical protein 1057 46.90 -1 1210388..1210645 + 85 74311673 ycfR SSON_1132 - hypothetical protein 1058 52.63 0 1210728..1211546 - 272 74311674 ycfS SSON_1133 - hypothetical protein 1059 54.95 0 1211828..1215274 - 1148 74311675 mfd SSON_1134 - transcription-repair coupling factor 1060 49.16 0 1215402..1216475 - 357 74311676 ycfT SSON_1135 - hypothetical protein 1061 54.50 0 1216737..1217936 + 399 74311677 ycfU SSON_1136 - outer membrane-specific lipoprotein transporter subunit LolC 1062 55.13 0 1217929..1218630 + 233 161986548 lolD SSON_1137 - lipoprotein transporter ATP-binding subunit 1063 50.84 0 1218630..1219874 + 414 74311679 ycfW SSON_1138 - outer membrane-specific lipoprotein transporter subunit LolE 1064 52.63 0 1219903..1220814 + 303 74311680 ycfX SSON_1139 - N-acetyl-D-glucosamine kinase 1065 51.34 0 1220830..1221651 + 273 74311681 cobB SSON_1140 - NAD-dependent deacetylase 1066 51.48 0 1221807..1222853 - 348 74311682 potD SSON_1141 - spermidine/putrescine ABC transporter periplasmic substrate-binding protein 1067 49.94 0 1222850..1223644 - 264 74311683 potC SSON_1142 - spermidine/putrescine ABC transporter membrane protein 1068 50.82 0 1223641..1224498 - 285 161986547 potB SSON_1143 - spermidine/putrescine ABC transporter membrane protein 1069 50.57 0 1224482..1225618 - 378 74311685 potA SSON_1144 - putrescine/spermidine ABC transporter ATPase protein 1070 49.39 0 1225868..1227094 + 408 74311686 pepT SSON_1145 - peptidase T 1071 53.40 0 1227143..1228273 - 376 74311687 ycfD SSON_1146 - hypothetical protein 1072 51.33 0 1228340..1229800 - 486 74311688 phoQ SSON_1147 - sensor protein PhoQ 1073 46.88 -1 1229800..1230471 - 223 74311689 phoP SSON_1148 - DNA-binding transcriptional regulator PhoP 1074 52.74 0 1230639..1232009 - 456 74311690 purB SSON_1149 - adenylosuccinate lyase 1075 57.17 +1 1232013..1232654 - 213 74311691 ycfC SSON_1150 - hypothetical protein 1076 53.48 0 1232690..1233796 - 368 161986546 trmU SSON_1151 - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 1077 49.35 0 1233850..1234311 - 153 74311693 - SSON_1152 - putative phosphohydrolase 1078 51.76 0 1234321..1234944 - 207 74311694 ymfC SSON_1153 - 23S rRNA pseudouridine synthase E 1079 50.12 0 1235146..1236396 + 416 74311695 icdA SSON_1154 - isocitrate dehydrogenase 1080 33.64 -2 1236499..1236822 - 107 74311696 ycgW SSON_1155 - hypothetical protein 1081 36.54 -2 1237518..1237922 - 134 74311697 ycgX SSON_1156 - hypothetical protein 1082 48.09 0 1238143..1238874 - 243 74311698 ycgE SSON_1157 - putative transcriptional regulator 1083 54.37 0 1240529..1241032 + 167 74311699 - SSON_1159 - IS1 ORF 1084 55.08 0 1241774..1242679 + 301 161986545 - SSON_1160 - insertion element IS2 transposase InsD 1085 45.24 -1 1242843..1243178 - 111 74311701 - SSON_1161 - hypothetical protein 1086 52.98 0 1243182..1243466 - 94 74311702 - SSON_1162 - hypothetical protein 1087 43.45 -1 1244546..1244812 - 88 74311703 minE SSON_1163 - cell division topological specificity factor MinE 1088 49.94 0 1244816..1245628 - 270 74311704 minD SSON_1164 - cell division inhibitor MinD 1089 51.01 0 1245652..1246347 - 231 74311705 minC SSON_1165 - septum formation inhibitor 1090 42.28 -2 1246867..1247235 + 122 74311706 ycgJ SSON_1166 - hypothetical protein 1091 42.54 -2 1247343..1247744 - 133 74311707 ycgK SSON_1167 - hypothetical protein 1092 41.90 -2 1247953..1248279 + 108 74311708 ycgL SSON_1168 - hypothetical protein 1093 51.82 0 1248351..1249010 + 219 74311709 ycgM SSON_1169 - hypothetical protein 1094 46.76 -1 1249102..1249548 + 148 161986544 ycgN SSON_1170 - hypothetical protein 1095 54.37 0 1250337..1250840 - 167 74311711 - SSON_1171 - IS1 ORF 1096 54.17 0 1251387..1251890 - 167 74311712 - SSON_1172 - IS1 ORF 1097 48.33 0 1252592..1253011 + 139 74311713 umuD SSON_1174 - DNA polymerase V subunit UmuD 1098 57.81 +1 1253521..1254717 - 398 74311714 - SSON_1176 - ISSfl2 ORF 1099 52.54 0 1255775..1256305 - 176 74311715 dsbB SSON_1177 - disulfide bond formation protein B 1100 52.79 0 1256451..1257992 - 513 74311716 nhaB SSON_1178 - sodium/proton antiporter 1101 51.53 0 1258213..1258932 + 239 74311717 fadR SSON_1179 - fatty acid metabolism regulator 1102 49.51 0 1258984..1260516 - 510 74311718 ycgB SSON_1180 - hypothetical protein 1103 56.04 +1 1260846..1262144 + 432 74311719 dadA SSON_1181 - D-amino acid dehydrogenase small subunit 1104 57.98 +1 1262154..1263224 + 356 74311720 dadX SSON_1182 - alanine racemase 1105 52.45 0 1263611..1265347 - 578 161986543 ycgO SSON_1183 - potassium/proton antiporter 1106 53.55 0 1265442..1266356 - 304 74311723 ldcA SSON_1185 - L,D-carboxypeptidase A 1107 50.96 0 1266342..1267067 + 241 74311722 mltE SSON_1184 - murein transglycosylase E 1108 50.61 0 1267069..1267803 - 244 74311724 ycgR SSON_1186 - hypothetical protein 1109 54.51 0 1267971..1268225 + 84 74311725 ymgE SSON_1187 - transglycosylase associated protein 1110 46.53 -1 1268277..1268579 + 100 74311726 - SSON_1188 - IS600 ORF1 1111 52.10 0 1268720..1269433 + 237 74311727 - SSON_1189 - IS600 ORF2 51.65 MEAN 4.20 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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