version 1.0
Shewanella putrefaciens CN-32, complete genome - 1..4659220 3972 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 940 43.56 0 1057298..1057522 + 74 146292051 - Sputcn32_0947 - hypothetical protein 941 42.62 0 1057767..1058240 + 157 146292052 - Sputcn32_0948 - bacterioferritin 942 42.95 0 1058250..1058717 + 155 146292053 - Sputcn32_0949 - bacterioferritin 943 44.91 0 1059013..1061016 + 667 146292054 - Sputcn32_0950 - methyl-accepting chemotaxis sensory transducer 944 46.23 0 1061087..1062226 + 379 146292055 - Sputcn32_0951 - DNA polymerase IV 945 46.67 0 1062269..1063168 - 299 146292056 - Sputcn32_0952 - LysR family transcriptional regulator 946 48.02 0 1063261..1064193 + 310 146292057 - Sputcn32_0953 - hypothetical protein 947 47.49 0 1064349..1065824 - 491 146292058 - Sputcn32_0954 - aminoacyl-histidine dipeptidase 948 50.55 +1 1066029..1067567 + 512 146292059 - Sputcn32_0955 - peptidase M17, leucyl aminopeptidase domain-containing protein 949 39.55 -1 1067851..1068027 + 58 146292060 - Sputcn32_0956 - hypothetical protein 950 44.68 0 1068434..1069411 + 325 146292061 - Sputcn32_0957 - hypothetical protein 951 40.86 -1 1069768..1070139 + 123 146292062 - Sputcn32_0958 - hypothetical protein 952 42.61 0 1070643..1070987 - 114 146292063 - Sputcn32_0959 - hypothetical protein 953 46.18 0 1071101..1071925 - 274 146292064 - Sputcn32_0960 - hemin importer ATP-binding subunit 954 50.58 +1 1071938..1072969 - 343 146292065 - Sputcn32_0961 - transport system permease protein 955 44.13 0 1072981..1074027 - 348 146292066 - Sputcn32_0962 - periplasmic binding protein 956 46.35 0 1074113..1074550 - 145 146292067 - Sputcn32_0963 - biopolymer transport protein ExbD/TolR 957 45.44 0 1074547..1075281 - 244 146292068 - Sputcn32_0964 - MotA/TolQ/ExbB proton channel 958 43.90 0 1075344..1076195 - 283 146292069 - Sputcn32_0965 - TonB family protein 959 45.53 0 1076428..1078518 + 696 146292070 - Sputcn32_0966 - TonB-dependent heme/hemoglobin receptor family protein 960 47.29 0 1078545..1079117 + 190 146292071 - Sputcn32_0967 - hypothetical protein 961 44.62 0 1079153..1079710 + 185 146292072 - Sputcn32_0968 - pyridoxamine 5'-phosphate oxidase-related, FMN-binding 962 48.21 0 1079902..1081743 + 613 146292073 - Sputcn32_0969 - lipid ABC transporter ATPase/inner membrane protein 963 44.51 0 1081844..1083445 - 533 146292074 - Sputcn32_0970 - AMP-dependent synthetase and ligase 964 43.78 0 1083852..1085315 - 487 146292075 - Sputcn32_0971 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 965 44.51 0 1085486..1086952 - 488 146292076 - Sputcn32_0972 - Fis family transcriptional regulator 966 40.83 -1 1087167..1087766 - 199 146292077 - Sputcn32_0973 - thiol:disulfide interchange protein, putative 967 43.90 0 1087949..1088563 + 204 146292078 - Sputcn32_0974 - lysine exporter protein LysE/YggA 968 42.90 0 1088629..1088952 - 107 146292079 - Sputcn32_0975 - hypothetical protein 969 44.75 0 1089026..1089568 - 180 146292080 - Sputcn32_0976 - pilin, putative 970 43.39 0 1089752..1090417 + 221 146292081 - Sputcn32_0977 - uracil-DNA glycosylase 971 45.68 0 1090480..1091475 - 331 146292082 - Sputcn32_0978 - trans-hexaprenyltranstransferase 972 44.87 0 1091727..1092038 + 103 146292083 rplU Sputcn32_0979 - 50S ribosomal protein L21 973 43.14 0 1092053..1092307 + 84 146292084 rpmA Sputcn32_0980 - 50S ribosomal protein L27 974 45.67 0 1092523..1093689 + 388 146292085 obgE Sputcn32_0981 - GTPase ObgE 975 45.28 0 1093717..1094478 + 253 146292086 - Sputcn32_0982 - hypothetical protein 976 45.15 0 1094475..1094948 + 157 146292087 - Sputcn32_0983 - hypothetical protein 977 43.89 0 1094978..1095460 + 160 146292088 - Sputcn32_0984 - dihydrofolate reductase 978 44.36 0 1095676..1096092 + 138 146292089 - Sputcn32_0985 - hypothetical protein 979 41.49 0 1096277..1098298 - 673 146292090 - Sputcn32_0986 - methyl-accepting chemotaxis sensory transducer 980 42.42 0 1098394..1099218 - 274 146292091 apaH Sputcn32_0987 - diadenosine tetraphosphatase 981 45.14 0 1099240..1099620 - 126 146292092 apaG Sputcn32_0988 - ApaG 982 46.22 0 1099672..1100478 - 268 146292093 ksgA Sputcn32_0989 - dimethyladenosine transferase 983 47.82 0 1100494..1101480 - 328 146292094 - Sputcn32_0990 - 4-hydroxythreonine-4-phosphate dehydrogenase 984 44.44 0 1101487..1102791 - 434 146292095 - Sputcn32_0991 - PpiC-type peptidyl-prolyl cis-trans isomerase 985 42.73 0 1103035..1105332 - 765 146292096 - Sputcn32_0992 - organic solvent tolerance protein 986 42.78 0 1105449..1106528 + 359 146292097 - Sputcn32_0993 - aminoglycoside phosphotransferase 987 46.90 0 1106529..1107206 + 225 146292098 - Sputcn32_0994 - nucleotidyl transferase 988 46.77 0 1107273..1108061 + 262 146292099 djlA Sputcn32_0995 - DNA-J like membrane chaperone protein 989 43.66 0 1108103..1108741 + 212 146292100 - Sputcn32_0996 - hypothetical protein 990 47.48 0 1108766..1109719 + 317 146292101 - Sputcn32_0997 - D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding 991 47.27 0 1109789..1112062 - 757 146292102 - Sputcn32_0998 - TPR repeat-containing protein 992 46.49 0 1112052..1113533 - 493 146292103 - Sputcn32_0999 - hypothetical protein 993 48.99 +1 1113688..1115412 - 574 146292104 - Sputcn32_1000 - pseudouridine synthase 994 51.28 +1 1115663..1116838 - 391 146292105 purT Sputcn32_1001 - phosphoribosylglycinamide formyltransferase 2 995 48.63 +1 1117161..1118291 - 376 146292106 - Sputcn32_1002 - sulfate ABC transporter, ATPase subunit 996 49.66 +1 1118288..1119157 - 289 146292107 - Sputcn32_1003 - sulfate ABC transporter, inner membrane subunit CysW 997 48.82 +1 1119167..1120012 - 281 146292108 - Sputcn32_1004 - sulfate ABC transporter, inner membrane subunit CysT 998 44.84 0 1120199..1121206 - 335 146292109 - Sputcn32_1005 - sulfate ABC transporter, periplasmic sulfate-binding protein 999 49.72 +1 1121418..1122296 + 292 146292110 cysM Sputcn32_1006 - cysteine synthase B 1000 44.32 0 1122372..1122908 - 178 146292111 - Sputcn32_1007 - hypothetical protein 1001 47.90 0 1123080..1123388 + 102 146292112 - Sputcn32_1008 - hypothetical protein 1002 47.28 0 1123488..1124756 - 422 146292113 - Sputcn32_1009 - integral membrane sensor signal transduction histidine kinase 1003 44.40 0 1124766..1125479 - 237 146292114 - Sputcn32_1010 - two component transcriptional regulator 1004 42.03 0 1125479..1125892 - 137 146292115 - Sputcn32_1011 - hypothetical protein 1005 41.18 0 1125898..1126764 - 288 146292116 - Sputcn32_1012 - MltA-interacting MipA family protein 1006 42.62 0 1127143..1127379 - 78 146292117 - Sputcn32_1013 - hypothetical protein 1007 42.38 0 1128142..1128705 + 187 146292118 - Sputcn32_1014 - GPR1/FUN34/yaaH family protein 1008 40.98 -1 1128759..1129229 - 156 146292119 - Sputcn32_1015 - hypothetical protein 1009 46.28 0 1129424..1129840 - 138 146292120 - Sputcn32_1016 - glyoxalase/bleomycin resistance protein/dioxygenase 1010 45.20 0 1129897..1130511 - 204 146292121 - Sputcn32_1017 - NADPH-dependent FMN reductase 1011 46.45 0 1130658..1131290 + 210 146292122 - Sputcn32_1018 - putative transcriptional regulator 1012 42.62 0 1131352..1132062 + 236 146292123 - Sputcn32_1019 - pseudouridine synthase 1013 42.37 0 1132084..1133709 - 541 146292124 - Sputcn32_1020 - methyl-accepting chemotaxis sensory transducer 1014 41.86 0 1134461..1135222 - 253 146292125 - Sputcn32_1021 - putative lipoprotein 1015 47.49 0 1135345..1136319 + 324 146292126 - Sputcn32_1022 - RluA family pseudouridine synthase 1016 48.98 +1 1136320..1137054 + 244 146292127 - Sputcn32_1023 - hypothetical protein 1017 48.37 0 1137253..1139826 + 857 146292128 - Sputcn32_1024 - ATPase 1018 42.52 0 1139930..1140397 - 155 146292129 - Sputcn32_1025 - hypothetical protein 1019 44.01 0 1140493..1141344 + 283 146292130 - Sputcn32_1026 - CDP-diacylglycerol--serine O-phosphatidyltransferase 1020 46.67 0 1147970..1148344 + 124 146292131 - Sputcn32_1028 - ISSod10, transposase OrfB 1021 40.07 -1 1148793..1149059 + 88 146292132 - Sputcn32_1029 - sodium pump decarboxylase, gamma subunit 1022 48.49 +1 1149071..1150897 + 608 146292133 - Sputcn32_1030 - pyruvate carboxylase subunit B 1023 46.15 0 1150906..1152036 + 376 146292134 - Sputcn32_1031 - sodium ion-translocating decarboxylase, beta subunit 1024 37.50 -1 1152077..1152244 - 55 146292135 - Sputcn32_1032 - hypothetical protein 1025 44.52 0 1152418..1153677 - 419 146292136 - Sputcn32_1033 - sodium:dicarboxylate symporter 1026 43.90 0 1154052..1154477 + 141 146292137 - Sputcn32_1034 - hypothetical protein 1027 44.23 0 1154627..1157461 + 944 146292138 - Sputcn32_1035 - peptidase M16 domain-containing protein 1028 42.79 0 1157647..1159296 + 549 146292139 - Sputcn32_1036 - glutamate--cysteine ligase 1029 45.95 0 1159314..1159757 + 147 146292140 - Sputcn32_1037 - hypothetical protein 1030 44.34 0 1159765..1160382 + 205 146292141 - Sputcn32_1038 - hypothetical protein 1031 40.03 -1 1160475..1161743 - 422 146292142 - Sputcn32_1039 - diguanylate cyclase 1032 46.81 0 1161896..1162993 - 365 146292143 - Sputcn32_1040 - phosphoribosylaminoimidazole carboxylase ATPase subunit 1033 49.39 +1 1162993..1163484 - 163 146292144 - Sputcn32_1041 - phosphoribosylaminoimidazole carboxylase, catalytic subunit 1034 46.19 0 1163764..1165521 - 585 146292145 - Sputcn32_1042 - putative sulfate transporter YchM 1035 43.27 0 1165724..1167625 + 633 146292146 - Sputcn32_1043 - von Willebrand factor, type A 1036 44.06 0 1167712..1168317 + 201 146292147 - Sputcn32_1044 - ECF subfamily RNA polymerase sigma-24 factor 1037 42.99 0 1168310..1169065 + 251 146292148 - Sputcn32_1045 - hypothetical protein 1038 38.55 -1 1169287..1169823 + 178 146292149 - Sputcn32_1046 - hemerythrin HHE cation binding domain-containing protein 1039 39.78 -1 1169917..1170102 - 61 146292150 - Sputcn32_1047 - hypothetical protein 44.78 MEAN 3.68 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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