version 1.0
Shewanella putrefaciens CN-32, complete genome - 1..4659220 3972 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 859 43.11 0 960057..960629 + 190 146291970 - Sputcn32_0866 - acetyltransferase 860 42.45 0 960696..961046 + 116 146291971 - Sputcn32_0867 - hypothetical protein 861 43.38 0 961201..962235 - 344 146291972 - Sputcn32_0868 - hypothetical protein 862 34.52 -2 962609..963199 + 196 146291973 - Sputcn32_0869 - hypothetical protein 863 42.80 0 964410..964895 - 161 146291974 - Sputcn32_0870 - hypothetical protein 864 49.05 +1 965027..966178 - 383 146291975 - Sputcn32_0871 - S-adenosylmethionine synthetase 865 49.57 +1 966657..968651 + 664 146291976 - Sputcn32_0872 - transketolase 866 47.39 0 968768..969784 + 338 146291977 - Sputcn32_0873 - erythrose 4-phosphate dehydrogenase 867 50.09 +1 969912..971087 + 391 146291978 pgk Sputcn32_0874 - phosphoglycerate kinase 868 48.60 +1 971301..972368 + 355 146291979 - Sputcn32_0875 - fructose-1,6-bisphosphate aldolase 869 41.60 0 972565..973302 + 245 146291980 - Sputcn32_0876 - hypothetical protein 870 46.42 0 973516..974952 + 478 146291981 - Sputcn32_0877 - Na+/H+ antiporter 871 44.82 0 975036..975566 - 176 146291982 - Sputcn32_0878 - hypothetical protein 872 46.59 0 975577..976398 - 273 146291983 - Sputcn32_0879 - cytochrome c, putative 873 45.56 0 976845..977588 + 247 146291984 - Sputcn32_0880 - transcriptional regulator, CadC 874 39.92 -1 977581..978111 + 176 146291985 - Sputcn32_0881 - hypothetical protein 875 42.17 0 978207..979610 + 467 146291986 - Sputcn32_0882 - hypothetical protein 876 44.33 0 979591..981828 - 745 146291987 - Sputcn32_0883 - putative PAS/PAC sensor protein 877 45.62 0 981997..982704 - 235 146291988 - Sputcn32_0884 - radical SAM domain-containing protein 878 45.65 0 982880..986071 - 1063 146291989 - Sputcn32_0885 - acriflavin resistance protein 879 44.97 0 986071..987282 - 403 146291990 - Sputcn32_0886 - RND family efflux transporter MFP subunit 880 48.49 +1 987648..988907 - 419 146291991 - Sputcn32_0887 - ATP-dependent RNA helicase SrmB 881 46.58 0 989021..989737 - 238 146291992 - Sputcn32_0888 - methyltransferase type 12 882 45.51 0 990269..991672 + 467 146291993 - Sputcn32_0889 - branched-chain amino acid transport system II carrier protein 883 47.40 0 991762..992664 + 300 146291994 - Sputcn32_0890 - tyrosine recombinase XerD 884 44.49 0 992798..993523 + 241 146291995 - Sputcn32_0891 - thiol:disulfide interchange protein DsbC 885 49.40 +1 993587..995341 + 584 146291996 - Sputcn32_0892 - single-stranded-DNA-specific exonuclease RecJ 886 40.00 -1 995365..995694 + 109 146291997 - Sputcn32_0893 - hypothetical protein 887 45.69 0 995730..996158 + 142 146291998 - Sputcn32_0894 - GCN5-related N-acetyltransferase 888 50.06 +1 996227..997798 - 523 146291999 - Sputcn32_0895 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase 889 45.61 0 997909..998478 - 189 146292000 - Sputcn32_0896 - alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 890 47.91 0 998854..1000410 - 518 146292001 - Sputcn32_0897 - leucyl aminopeptidase 891 43.82 0 1000500..1001243 - 247 146292002 - Sputcn32_0898 - spermine synthase 892 45.97 0 1001347..1001892 + 181 146292003 - Sputcn32_0899 - hypothetical protein 893 32.66 -2 1001909..1002352 + 147 146292004 - Sputcn32_0900 - hypothetical protein 894 37.66 -1 1002444..1002905 + 153 146292005 - Sputcn32_0901 - hypothetical protein 895 39.58 -1 1003044..1003331 - 95 146292006 - Sputcn32_0902 - hypothetical protein 896 50.27 +1 1003382..1004119 - 245 146292007 - Sputcn32_0903 - dienelactone hydrolase 897 43.33 0 1004188..1005177 - 329 146292008 - Sputcn32_0904 - D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding 898 46.66 0 1005433..1007226 - 597 146292009 - Sputcn32_0905 - flavocytochrome c 899 42.82 0 1007724..1008134 + 136 146292010 - Sputcn32_0906 - hypothetical protein 900 43.50 0 1008134..1008664 + 176 146292011 - Sputcn32_0907 - methyltransferase type 12 901 45.36 0 1008725..1009015 + 96 146292012 - Sputcn32_0908 - hypothetical protein 902 43.13 0 1009072..1010643 + 523 146292013 - Sputcn32_0909 - rhomboid family protein 903 47.27 0 1010682..1011779 - 365 146292014 - Sputcn32_0910 - sodium/calcium exchanger membrane region 904 38.05 -1 1012008..1012325 + 105 146292015 - Sputcn32_0911 - hypothetical protein 905 44.41 0 1012474..1014216 - 580 146292016 - Sputcn32_0912 - hypothetical protein 906 47.36 0 1014226..1016499 - 757 146292017 - Sputcn32_0913 - hypothetical protein 907 43.60 0 1016700..1017254 - 184 146292018 - Sputcn32_0914 - hypothetical protein 908 37.78 -1 1017493..1017762 + 89 146292019 - Sputcn32_0915 - hypothetical protein 909 45.79 0 1017958..1019145 + 395 146292020 - Sputcn32_0916 - aromatic amino acid permease 910 45.67 0 1019408..1021564 + 718 146292021 - Sputcn32_0917 - hypothetical protein 911 41.67 0 1022344..1022547 - 67 146292022 - Sputcn32_0918 - hypothetical protein 912 47.35 0 1023125..1023823 - 232 146292023 - Sputcn32_0919 - hypothetical protein 913 40.91 -1 1024314..1024775 - 153 146292024 - Sputcn32_0920 - hypothetical protein 914 43.14 0 1025306..1025560 - 84 146292025 - Sputcn32_0921 - hypothetical protein 915 48.01 0 1025836..1026564 - 242 146292026 - Sputcn32_0922 - pseudouridine synthase 916 42.49 0 1026573..1027271 - 232 146292027 - Sputcn32_0923 - hypothetical protein 917 44.62 0 1027449..1028786 - 445 146292028 - Sputcn32_0924 - Na+/H+ antiporter NhaC 918 43.14 0 1029132..1030763 - 543 146292029 - Sputcn32_0925 - methyl-accepting chemotaxis sensory transducer 919 43.92 0 1030921..1031808 - 295 146292030 - Sputcn32_0926 - hypothetical protein 920 45.51 0 1031991..1032770 + 259 146292031 - Sputcn32_0927 - helix-turn-helix domain-containing protein 921 37.99 -1 1033389..1033796 - 135 146292032 - Sputcn32_0928 - GreA/GreB family elongation factor 922 48.51 +1 1034498..1035505 - 335 146292033 - Sputcn32_0929 - cytochrome d ubiquinol oxidase, subunit II 923 49.21 +1 1035566..1036900 - 444 146292034 - Sputcn32_0930 - cytochrome bd ubiquinol oxidase, subunit I 924 49.93 +1 1037059..1038498 + 479 146292035 - Sputcn32_0931 - GntR family transcriptional regulator 925 50.50 +1 1038622..1039920 + 432 146292036 - Sputcn32_0932 - O-acetylhomoserine/O-acetylserine sulfhydrylase 926 47.24 0 1040041..1043232 - 1063 146292037 - Sputcn32_0933 - hypothetical protein 927 48.55 +1 1043437..1044645 - 402 146292038 - Sputcn32_0934 - rRNA (guanine-N(2)-)-methyltransferase 928 47.64 0 1044657..1045271 + 204 146292039 - Sputcn32_0935 - 2OG-Fe(II) oxygenase 929 45.48 0 1045397..1045717 + 106 146292040 - Sputcn32_0936 - BolA family protein 930 45.86 0 1045916..1047025 + 369 146292041 - Sputcn32_0937 - TRAP dicarboxylate transporter- DctP subunit 931 42.55 0 1047152..1047661 + 169 146292042 - Sputcn32_0938 - S-ribosylhomocysteinase 932 44.25 0 1047827..1049878 + 683 146292043 - Sputcn32_0939 - TonB-dependent receptor 933 45.47 0 1050280..1051614 + 444 146292044 - Sputcn32_0940 - Na(+)-translocating NADH-quinone reductase subunit A 934 47.33 0 1051614..1052813 + 399 146292045 - Sputcn32_0941 - Na(+)-translocating NADH-quinone reductase subunit B 935 44.61 0 1052806..1053594 + 262 146292046 - Sputcn32_0942 - Na(+)-translocating NADH-quinone reductase subunit C 936 43.60 0 1053594..1054226 + 210 146292047 - Sputcn32_0943 - Na(+)-translocating NADH-quinone reductase subunit D 937 44.01 0 1054232..1054840 + 202 146292048 - Sputcn32_0944 - Na(+)-translocating NADH-quinone reductase subunit E 938 44.79 0 1054887..1056143 + 418 146292049 - Sputcn32_0945 - Na(+)-translocating NADH-quinone reductase subunit F 939 44.06 0 1056243..1057286 + 347 146292050 - Sputcn32_0946 - ApbE family lipoprotein 940 43.56 0 1057298..1057522 + 74 146292051 - Sputcn32_0947 - hypothetical protein 941 42.62 0 1057767..1058240 + 157 146292052 - Sputcn32_0948 - bacterioferritin 942 42.95 0 1058250..1058717 + 155 146292053 - Sputcn32_0949 - bacterioferritin 943 44.91 0 1059013..1061016 + 667 146292054 - Sputcn32_0950 - methyl-accepting chemotaxis sensory transducer 944 46.23 0 1061087..1062226 + 379 146292055 - Sputcn32_0951 - DNA polymerase IV 945 46.67 0 1062269..1063168 - 299 146292056 - Sputcn32_0952 - LysR family transcriptional regulator 946 48.02 0 1063261..1064193 + 310 146292057 - Sputcn32_0953 - hypothetical protein 947 47.49 0 1064349..1065824 - 491 146292058 - Sputcn32_0954 - aminoacyl-histidine dipeptidase 948 50.55 +1 1066029..1067567 + 512 146292059 - Sputcn32_0955 - peptidase M17, leucyl aminopeptidase domain-containing protein 949 39.55 -1 1067851..1068027 + 58 146292060 - Sputcn32_0956 - hypothetical protein 950 44.68 0 1068434..1069411 + 325 146292061 - Sputcn32_0957 - hypothetical protein 951 40.86 -1 1069768..1070139 + 123 146292062 - Sputcn32_0958 - hypothetical protein 952 42.61 0 1070643..1070987 - 114 146292063 - Sputcn32_0959 - hypothetical protein 953 46.18 0 1071101..1071925 - 274 146292064 - Sputcn32_0960 - hemin importer ATP-binding subunit 954 50.58 +1 1071938..1072969 - 343 146292065 - Sputcn32_0961 - transport system permease protein 955 44.13 0 1072981..1074027 - 348 146292066 - Sputcn32_0962 - periplasmic binding protein 956 46.35 0 1074113..1074550 - 145 146292067 - Sputcn32_0963 - biopolymer transport protein ExbD/TolR 957 45.44 0 1074547..1075281 - 244 146292068 - Sputcn32_0964 - MotA/TolQ/ExbB proton channel 958 43.90 0 1075344..1076195 - 283 146292069 - Sputcn32_0965 - TonB family protein 44.78 MEAN 3.68 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0