version 1.0
Shewanella putrefaciens CN-32, complete genome - 1..4659220 3972 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 419 45.39 0 458321..458917 + 198 146291530 - Sputcn32_0423 - azoreductase 420 52.38 +2 459054..459620 - 188 146291531 - Sputcn32_0424 - XRE family transcriptional regulator 421 52.02 +1 459784..460971 + 395 146291532 - Sputcn32_0425 - benzoate transporter 422 47.80 0 461022..461498 - 158 146291533 - Sputcn32_0426 - GCN5-related N-acetyltransferase 423 33.20 -2 461819..462571 + 250 146291534 - Sputcn32_0427 - hypothetical protein 424 42.33 0 463101..463400 - 99 146291535 - Sputcn32_0428 - plasmid stabilization system protein 425 43.21 0 463409..463651 - 80 146291536 - Sputcn32_0429 - prevent-host-death family protein 426 40.73 -1 463931..464674 - 247 146291537 - Sputcn32_0430 - hypothetical protein 427 52.86 +2 464706..465965 - 419 146291538 - Sputcn32_0431 - 3-oxoacyl-(acyl carrier protein) synthase II 428 52.34 +2 465966..466691 - 241 146291539 fabG Sputcn32_0432 - 3-ketoacyl-(acyl-carrier-protein) reductase 429 48.69 +1 466804..467337 - 177 146291540 - Sputcn32_0433 - thioester dehydrase family protein 430 52.55 +2 467342..468559 - 405 146291541 - Sputcn32_0434 - 3-oxoacyl-(acyl carrier protein) synthase I 431 49.02 +1 468588..469352 - 254 146291542 - Sputcn32_0435 - hypothetical protein 432 50.47 +1 469357..470646 - 429 146291543 - Sputcn32_0436 - FAD dependent oxidoreductase 433 51.31 +1 470670..473111 - 813 146291544 - Sputcn32_0437 - hypothetical protein 434 50.39 +1 473114..473881 - 255 146291545 - Sputcn32_0438 - hypothetical protein 435 46.21 0 473878..474312 - 144 146291546 - Sputcn32_0439 - thioesterase superfamily protein 436 52.32 +2 474309..475883 - 524 146291547 - Sputcn32_0440 - histidine ammonia-lyase 437 50.16 +1 475880..477769 - 629 146291548 - Sputcn32_0441 - glycosyl transferase family protein 438 49.03 +1 477763..478176 - 137 146291549 - Sputcn32_0442 - thioester dehydrase family protein 439 49.89 +1 478169..479533 - 454 146291550 - Sputcn32_0443 - hypothetical protein 440 48.09 0 479530..480078 - 182 146291551 - Sputcn32_0444 - hypothetical protein 441 42.97 0 480078..480326 - 82 146291552 - Sputcn32_0445 - acyl carrier protein 442 43.92 0 480336..480590 - 84 146291553 - Sputcn32_0446 - acyl carrier protein, putative 443 50.11 +1 480574..481449 - 291 146291554 - Sputcn32_0447 - phospholipid/glycerol acyltransferase 444 50.67 +1 481442..482185 - 247 146291555 - Sputcn32_0448 - hypothetical protein 445 41.33 0 482525..483424 - 299 146291556 - Sputcn32_0449 - hypothetical protein 446 51.65 +1 483607..485697 - 696 146291557 - Sputcn32_0450 - ATP-dependent DNA helicase RecG 447 44.68 0 485930..486643 + 237 146291558 - Sputcn32_0451 - multiple drug resistance protein MarC 448 46.20 0 486761..488206 - 481 146291559 - Sputcn32_0452 - OmpA/MotB domain-containing protein 449 34.18 -2 488359..488712 + 117 146291560 - Sputcn32_0453 - hypothetical protein 450 43.98 0 489267..489623 + 118 146291561 - Sputcn32_0454 - hypothetical protein 451 51.39 +1 489949..490812 - 287 146291562 - Sputcn32_0455 - hypothetical protein 452 48.60 +1 491350..492063 + 237 146291563 - Sputcn32_0456 - ribonuclease PH 453 49.22 +1 492231..492872 + 213 146291564 pyrE Sputcn32_0457 - orotate phosphoribosyltransferase 454 44.96 0 492931..493575 - 214 146291565 folE Sputcn32_0458 - GTP cyclohydrolase I 455 43.77 0 493799..494392 - 197 146291566 slmA Sputcn32_0459 - nucleoid occlusion protein 456 46.84 0 494425..494883 - 152 146291567 dut Sputcn32_0460 - deoxyuridine 5'-triphosphate nucleotidohydrolase 457 50.20 +1 494880..496100 - 406 146291568 - Sputcn32_0461 - phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase 458 45.58 0 496223..496900 + 225 146291569 - Sputcn32_0462 - DNA repair protein RadC 459 43.88 0 497022..497258 + 78 146291570 - Sputcn32_0463 - ribosomal protein L28 460 35.06 -2 497265..497438 + 57 146291571 rpmG Sputcn32_0464 - 50S ribosomal protein L33 461 47.95 0 497762..499081 + 439 146291572 - Sputcn32_0465 - N-acetylglutamate synthase 462 42.20 0 499197..499715 + 172 146291573 - Sputcn32_0466 - hypothetical protein 463 46.89 0 499762..500646 - 294 146291574 - Sputcn32_0467 - transporter DMT superfamily protein 464 48.82 +1 500839..501303 - 154 146291575 - Sputcn32_0468 - hypothetical protein 465 48.85 +1 501600..503423 + 607 146291576 - Sputcn32_0469 - ATP-dependent DNA helicase RecQ 466 41.60 0 503405..505183 - 592 146291577 - Sputcn32_0470 - tetratricopeptide domain-containing protein 467 48.18 0 505691..507259 + 522 146291578 - Sputcn32_0471 - 2-isopropylmalate synthase 468 50.14 +1 507330..508424 + 364 146291579 - Sputcn32_0472 - 3-isopropylmalate dehydrogenase 469 51.72 +1 508424..509848 + 474 146291580 - Sputcn32_0473 - isopropylmalate isomerase large subunit 470 49.67 +1 509876..510481 + 201 146291581 - Sputcn32_0474 - isopropylmalate isomerase small subunit 471 48.16 0 511001..512356 + 451 146291582 - Sputcn32_0475 - membrane protein involved in aromatic hydrocarbon degradation 472 50.03 +1 512536..514020 + 494 146291583 - Sputcn32_0476 - glycerol kinase 473 44.85 0 514127..514456 - 109 146291584 - Sputcn32_0477 - hypothetical protein 474 45.32 0 514915..515373 + 152 146291585 - Sputcn32_0478 - cell division protein MraZ 475 46.82 0 515405..516346 + 313 146291586 mraW Sputcn32_0479 - S-adenosyl-methyltransferase MraW 476 45.08 0 516357..516671 + 104 146291587 - Sputcn32_0480 - cell division protein FtsL 477 47.43 0 516685..518436 + 583 146291588 - Sputcn32_0481 - peptidoglycan glycosyltransferase 478 49.43 +1 518433..519935 + 500 146291589 - Sputcn32_0482 - UDP-N-acetylmuramyl-tripeptide synthetase 479 47.87 0 519932..521314 + 460 146291590 - Sputcn32_0483 - UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase 480 44.23 0 521315..522397 + 360 146291591 - Sputcn32_0484 - phospho-N-acetylmuramoyl-pentapeptide-transferase 481 49.70 +1 522404..523723 + 439 146291592 - Sputcn32_0485 - UDP-N-acetylmuramoylalanine--D-glutamate ligase 482 46.45 0 523713..524924 + 403 146291593 - Sputcn32_0486 - cell division protein FtsW 483 48.85 +1 524924..526012 + 362 146291594 - Sputcn32_0487 - UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase 484 48.67 +1 526015..527481 + 488 146291595 - Sputcn32_0488 - UDP-N-acetylmuramate--alanine ligase 485 44.40 0 527633..528382 + 249 146291596 - Sputcn32_0489 - polypeptide-transport-associated domain-containing protein 486 49.76 +1 528363..529598 + 411 146291597 - Sputcn32_0490 - cell division protein FtsA 487 50.00 +1 529632..530819 + 395 146291598 - Sputcn32_0491 - cell division protein FtsZ 488 44.63 0 531000..531920 + 306 146291599 lpxC Sputcn32_0492 - UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 489 45.86 0 531932..532378 - 148 146291600 - Sputcn32_0493 - hypothetical protein 490 44.44 0 532406..533305 + 299 146291601 - Sputcn32_0494 - peptidase M23B 491 44.87 0 533366..536095 + 909 146291602 - Sputcn32_0495 - preprotein translocase subunit SecA 492 48.26 0 542884..543285 - 133 146291603 - Sputcn32_0496 - hypothetical protein 493 47.12 0 543297..544304 - 335 146291604 - Sputcn32_0497 - delta-aminolevulinic acid dehydratase 494 41.28 0 544314..546188 - 624 146291605 - Sputcn32_0498 - diguanylate cyclase 495 45.40 0 546181..546984 - 267 146291606 - Sputcn32_0499 - TatD-related deoxyribonuclease 496 42.61 0 546984..547511 - 175 146291607 - Sputcn32_0500 - hypothetical protein 497 42.80 0 547558..548307 - 249 146291608 - Sputcn32_0501 - Sec-independent protein translocase, TatC subunit 498 49.27 +1 548311..548787 - 158 146291609 - Sputcn32_0502 - twin-arginine translocation protein, TatB subunit 499 40.00 -1 548795..549034 - 79 146291610 - Sputcn32_0503 - twin arginine-targeting protein translocase 500 43.64 0 549094..550743 - 549 146291611 - Sputcn32_0504 - 2-polyprenylphenol 6-hydroxylase 501 44.12 0 550740..551360 - 206 146291612 - Sputcn32_0505 - hypothetical protein 502 45.50 0 551360..552115 - 251 146291613 - Sputcn32_0506 - ubiquinone/menaquinone biosynthesis methyltransferase 503 48.92 +1 552360..553424 - 354 146291614 - Sputcn32_0507 - arginase/agmatinase/formiminoglutamase 504 45.47 0 553552..554037 - 161 146291615 - Sputcn32_0508 - ribonuclease activity regulator protein RraA 505 38.04 -1 554356..554610 + 84 146291616 - Sputcn32_0509 - hypothetical protein 506 45.81 0 554971..555483 + 170 146291617 - Sputcn32_0510 - phosphoesterase, PA-phosphatase related 507 46.11 0 555557..556597 + 346 146291618 - Sputcn32_0511 - hypothetical protein 508 43.76 0 556739..558157 + 472 146291619 - Sputcn32_0512 - hypothetical protein 509 41.01 -1 558265..559893 - 542 146291620 - Sputcn32_0513 - methyl-accepting chemotaxis sensory transducer 510 44.72 0 560099..560713 - 204 146291621 - Sputcn32_0514 - DedA family protein 511 45.49 0 560912..561832 - 306 146291622 - Sputcn32_0515 - putative manganese-dependent inorganic pyrophosphatase 512 41.34 0 561969..562430 - 153 146291623 - Sputcn32_0516 - hypothetical protein 513 46.74 0 562566..565019 - 817 146291624 - Sputcn32_0517 - TonB-dependent receptor 514 44.44 0 565272..565847 + 191 146291625 - Sputcn32_0518 - ATP-dependent protease La 515 43.90 0 565901..566818 + 305 146291626 - Sputcn32_0519 - pseudouridine synthase 516 47.20 0 566933..568237 + 434 146291627 - Sputcn32_0520 - integral membrane sensor signal transduction histidine kinase 517 48.91 +1 568234..568785 + 183 146291628 - Sputcn32_0521 - two component Fis family transcriptional regulator 518 46.75 0 568817..569293 + 158 146291629 - Sputcn32_0522 - hypothetical protein 44.78 MEAN 3.68 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0